Protein ID | Agabi119p4|055700 |
Gene name | |
Location | scaffold_03a:785235..788882 |
Strand | + |
Gene length (bp) | 3647 |
Transcript length (bp) | 3099 |
Coding sequence length (bp) | 3099 |
Protein length (aa) | 1033 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02373 | JmjC | JmjC domain, hydroxylase | 9.1E-12 | 166 | 269 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Agabi119p4|055700 MMISSKGWSVEWLLKRSETFKLARRISCTVDDLDNVIEQYEESDVPLVIGGWHQTSQWPKKVFNMNFCRQYFREE NKEICARNVRTRSDQSMTFEDFLGRSYTTSTFAEPEETQRWYGKDIECPRDWEEWLSGEGVIPTQLLPGGGNDLL ALRPQRNGRPDVETLMCYFGIGDTYTPCHKDQCASSGQNLMCFTEDGSSSFWFMTKGSDCPKVANYFRKLKRELD HETHVMSLSDLEGAPFDIYIVEQKVGDLVLVPPRSCHQVVNSGKMTIKMSWSRMTLSGLAAAFYYELPLYRRVCR PETYQIRSTVYYVLTDYTRKLNTLSSKPFNSLQKNILIKRLAEVLRLYGHILIEEYSPYGDSVDTDKPRSKDEEE GSPLQTSVLVEDFHMGPEASTIICSGCYAEGRTCACEDMIPKQRQQSSILLSARWEALEALKNTGHSMETFEGSE SQEEQKGFFTQNSKRSVFQAAMLVHQMRLNDKKRPFRACRPTSESHQVPASWAISCKKCHSSKCFPHLLDLYRMH CIPALFLANQKDDHVAYHSGHAAKFPDYHVREKFFLRDQGENPSIAPDFDVQLVYNASKYPICQPVNTANTRIGW YDRLLPVSKAKTKEPKPQSLPTGSTGGSDSEVDESDGHGKSYSPTNSSQRSMKNHAYVDIKPRMSTGPSKITSEQ MSLSSLSSDSEDSGSDYMSSKPSLKKAPRRSLHGGPQKIVDLESGAGSSSVSRSVKRPNETQSAGPSGDGTVFAS VHRIGPPRKKRRQESESQSREPASKESPSRPTEVKKKTREAERDSFAASLGAAINEVAKSATRTMKNRQHRKGDI EKVKKRPSGDSTSAQQIVVKPTIREKSSPSSISKRSVLARGEDLPDTTSLSSKGPILVNVADLQDMITNTAEQVA RKIVEDTSSTASLATKTAVAMMTSFAAAGKFVNSNTQMEFPSVSHLGEASQSIVKPMPKGSSSVDQRQRNISIEE DSGVHSSDNNHHQIRETTTTISVQSSSSQAPQLKRPLATSRGLYTNQKKRRVFEDEN* |
Coding | >Agabi119p4|055700 ATGATGATCTCTTCCAAGGGATGGTCAGTTGAATGGTTGCTCAAGAGATCTGAAACCTTCAAGCTTGCTCGCCGC ATTTCTTGCACTGTCGACGACCTGGACAATGTAATTGAACAGTACGAAGAAAGTGATGTCCCTTTGGTCATAGGA GGGTGGCATCAAACCTCCCAGTGGCCGAAAAAGGTCTTCAATATGAACTTCTGTCGACAGTACTTCCGAGAGGAG AATAAGGAAATATGTGCTCGCAATGTACGCACACGCTCTGACCAGTCCATGACTTTCGAAGACTTTCTCGGGAGA TCATATACAACCTCTACGTTCGCAGAACCTGAAGAAACGCAACGTTGGTATGGAAAGGATATTGAATGTCCTCGT GACTGGGAAGAATGGCTTTCGGGTGAAGGCGTTATTCCTACTCAGTTGTTACCAGGGGGAGGCAACGATCTCTTA GCGCTGAGGCCACAAAGGAATGGGCGTCCAGATGTAGAAACCCTGATGTGCTACTTTGGCATAGGGGACACTTAC ACGCCTTGTCACAAGGATCAGTGCGCGTCCTCTGGCCAGAACCTCATGTGTTTCACTGAGGACGGAAGTTCGTCG TTCTGGTTCATGACTAAAGGCTCAGATTGCCCCAAAGTCGCTAATTATTTCCGTAAACTGAAGCGGGAACTCGAC CACGAAACGCACGTTATGTCCCTTTCCGACTTAGAGGGGGCTCCTTTCGATATTTATATCGTAGAGCAAAAGGTT GGAGATTTGGTCCTGGTTCCTCCTCGAAGTTGTCACCAGGTCGTCAATTCCGGAAAGATGACAATTAAAATGTCC TGGTCCCGGATGACGCTATCTGGTTTGGCTGCAGCTTTTTACTACGAACTACCTCTCTATCGCAGAGTCTGTCGT CCGGAGACGTACCAAATAAGAAGCACTGTTTATTATGTGCTCACTGACTATACCCGGAAATTAAACACCCTCAGC TCCAAACCATTCAACTCACTCCAAAAGAATATTTTAATCAAGCGTCTCGCGGAAGTTTTGCGACTTTACGGCCAT ATTCTAATTGAAGAGTATTCCCCATACGGTGATTCCGTTGACACCGACAAGCCTCGATCCAAGGACGAAGAGGAA GGGTCGCCTCTGCAAACTTCAGTATTAGTAGAAGACTTTCATATGGGCCCTGAAGCAAGTACCATTATTTGTTCT GGGTGCTACGCGGAAGGTCGAACGTGTGCTTGCGAAGATATGATCCCAAAGCAACGTCAACAATCTAGCATTCTT TTGTCTGCTCGGTGGGAAGCTTTGGAAGCTCTGAAAAATACGGGGCACTCGATGGAAACTTTCGAAGGCTCAGAA TCGCAAGAAGAACAGAAAGGTTTTTTCACCCAGAACTCCAAACGCAGTGTCTTTCAAGCCGCGATGCTAGTACAT CAGATGCGGTTGAACGACAAAAAACGACCTTTTAGAGCGTGTCGGCCCACCTCAGAGTCGCATCAAGTACCCGCA AGTTGGGCGATTTCGTGCAAGAAATGTCATTCCTCCAAGTGCTTTCCTCACCTCCTTGACCTGTATCGTATGCAT TGTATCCCCGCCCTGTTTCTCGCCAATCAAAAAGACGATCATGTGGCTTATCATTCGGGTCATGCAGCTAAATTT CCGGACTACCACGTCAGGGAAAAATTCTTTTTAAGAGACCAGGGAGAGAATCCGTCGATTGCACCCGACTTTGAT GTTCAACTAGTGTATAACGCCTCAAAATATCCAATCTGTCAACCCGTCAACACCGCAAATACCCGTATCGGCTGG TATGATCGACTATTGCCGGTATCAAAGGCAAAAACGAAGGAACCAAAGCCTCAGTCACTGCCAACAGGCTCGACG GGGGGTTCGGATAGCGAGGTTGACGAATCTGATGGCCACGGTAAATCTTACTCCCCAACAAACAGCTCTCAAAGG AGTATGAAAAACCATGCGTATGTCGATATCAAGCCCCGAATGTCAACAGGCCCTTCAAAAATCACCTCTGAACAA ATGTCTCTTTCATCATTAAGCAGTGATTCTGAAGACTCTGGTTCTGATTATATGTCATCGAAGCCATCTCTTAAA AAGGCGCCCAGGCGAAGCTTGCATGGCGGACCGCAGAAGATAGTCGATCTGGAGTCTGGTGCTGGTTCATCTTCA GTCAGTAGGTCGGTAAAAAGGCCAAACGAAACACAGTCGGCAGGGCCTAGTGGTGATGGTACCGTCTTTGCATCC GTTCACCGCATTGGCCCACCACGAAAGAAGCGGCGCCAAGAATCCGAGTCGCAAAGCAGAGAGCCAGCAAGCAAA GAGTCACCGAGCAGACCCACAGAGGTCAAGAAGAAAACGAGAGAAGCTGAACGCGATAGCTTTGCCGCATCTCTT GGAGCGGCTATTAACGAGGTAGCGAAAAGTGCTACTCGAACGATGAAAAATCGTCAGCATCGGAAGGGAGATATC GAAAAAGTCAAAAAGCGACCCAGCGGCGATTCTACTTCGGCGCAGCAAATTGTAGTGAAACCAACCATCAGGGAA AAATCATCGCCATCCTCAATTTCCAAAAGATCCGTCCTTGCCAGAGGTGAAGACCTACCGGATACGACATCACTG TCATCGAAAGGCCCGATCCTCGTGAACGTCGCAGATCTACAAGATATGATAACGAACACGGCAGAACAGGTTGCT AGAAAAATCGTTGAAGACACTTCTTCGACTGCATCGTTAGCAACGAAGACCGCGGTCGCGATGATGACGAGTTTC GCTGCTGCTGGCAAGTTTGTGAACAGTAACACTCAGATGGAGTTTCCTTCCGTAAGCCATTTGGGAGAAGCATCT CAGTCGATTGTCAAACCCATGCCAAAAGGGTCATCCTCCGTTGATCAGCGTCAACGTAATATTTCAATAGAAGAA GATTCAGGGGTCCACTCTAGCGATAACAACCATCATCAGATTCGAGAAACCACCACCACCATCAGTGTCCAATCC TCTTCCAGCCAAGCTCCTCAACTCAAACGACCCTTGGCAACCTCCCGAGGTTTATATACAAATCAGAAAAAACGG CGCGTCTTTGAAGATGAAAATTAA |
Transcript | >Agabi119p4|055700 ATGATGATCTCTTCCAAGGGATGGTCAGTTGAATGGTTGCTCAAGAGATCTGAAACCTTCAAGCTTGCTCGCCGC ATTTCTTGCACTGTCGACGACCTGGACAATGTAATTGAACAGTACGAAGAAAGTGATGTCCCTTTGGTCATAGGA GGGTGGCATCAAACCTCCCAGTGGCCGAAAAAGGTCTTCAATATGAACTTCTGTCGACAGTACTTCCGAGAGGAG AATAAGGAAATATGTGCTCGCAATGTACGCACACGCTCTGACCAGTCCATGACTTTCGAAGACTTTCTCGGGAGA TCATATACAACCTCTACGTTCGCAGAACCTGAAGAAACGCAACGTTGGTATGGAAAGGATATTGAATGTCCTCGT GACTGGGAAGAATGGCTTTCGGGTGAAGGCGTTATTCCTACTCAGTTGTTACCAGGGGGAGGCAACGATCTCTTA GCGCTGAGGCCACAAAGGAATGGGCGTCCAGATGTAGAAACCCTGATGTGCTACTTTGGCATAGGGGACACTTAC ACGCCTTGTCACAAGGATCAGTGCGCGTCCTCTGGCCAGAACCTCATGTGTTTCACTGAGGACGGAAGTTCGTCG TTCTGGTTCATGACTAAAGGCTCAGATTGCCCCAAAGTCGCTAATTATTTCCGTAAACTGAAGCGGGAACTCGAC CACGAAACGCACGTTATGTCCCTTTCCGACTTAGAGGGGGCTCCTTTCGATATTTATATCGTAGAGCAAAAGGTT GGAGATTTGGTCCTGGTTCCTCCTCGAAGTTGTCACCAGGTCGTCAATTCCGGAAAGATGACAATTAAAATGTCC TGGTCCCGGATGACGCTATCTGGTTTGGCTGCAGCTTTTTACTACGAACTACCTCTCTATCGCAGAGTCTGTCGT CCGGAGACGTACCAAATAAGAAGCACTGTTTATTATGTGCTCACTGACTATACCCGGAAATTAAACACCCTCAGC TCCAAACCATTCAACTCACTCCAAAAGAATATTTTAATCAAGCGTCTCGCGGAAGTTTTGCGACTTTACGGCCAT ATTCTAATTGAAGAGTATTCCCCATACGGTGATTCCGTTGACACCGACAAGCCTCGATCCAAGGACGAAGAGGAA GGGTCGCCTCTGCAAACTTCAGTATTAGTAGAAGACTTTCATATGGGCCCTGAAGCAAGTACCATTATTTGTTCT GGGTGCTACGCGGAAGGTCGAACGTGTGCTTGCGAAGATATGATCCCAAAGCAACGTCAACAATCTAGCATTCTT TTGTCTGCTCGGTGGGAAGCTTTGGAAGCTCTGAAAAATACGGGGCACTCGATGGAAACTTTCGAAGGCTCAGAA TCGCAAGAAGAACAGAAAGGTTTTTTCACCCAGAACTCCAAACGCAGTGTCTTTCAAGCCGCGATGCTAGTACAT CAGATGCGGTTGAACGACAAAAAACGACCTTTTAGAGCGTGTCGGCCCACCTCAGAGTCGCATCAAGTACCCGCA AGTTGGGCGATTTCGTGCAAGAAATGTCATTCCTCCAAGTGCTTTCCTCACCTCCTTGACCTGTATCGTATGCAT TGTATCCCCGCCCTGTTTCTCGCCAATCAAAAAGACGATCATGTGGCTTATCATTCGGGTCATGCAGCTAAATTT CCGGACTACCACGTCAGGGAAAAATTCTTTTTAAGAGACCAGGGAGAGAATCCGTCGATTGCACCCGACTTTGAT GTTCAACTAGTGTATAACGCCTCAAAATATCCAATCTGTCAACCCGTCAACACCGCAAATACCCGTATCGGCTGG TATGATCGACTATTGCCGGTATCAAAGGCAAAAACGAAGGAACCAAAGCCTCAGTCACTGCCAACAGGCTCGACG GGGGGTTCGGATAGCGAGGTTGACGAATCTGATGGCCACGGTAAATCTTACTCCCCAACAAACAGCTCTCAAAGG AGTATGAAAAACCATGCGTATGTCGATATCAAGCCCCGAATGTCAACAGGCCCTTCAAAAATCACCTCTGAACAA ATGTCTCTTTCATCATTAAGCAGTGATTCTGAAGACTCTGGTTCTGATTATATGTCATCGAAGCCATCTCTTAAA AAGGCGCCCAGGCGAAGCTTGCATGGCGGACCGCAGAAGATAGTCGATCTGGAGTCTGGTGCTGGTTCATCTTCA GTCAGTAGGTCGGTAAAAAGGCCAAACGAAACACAGTCGGCAGGGCCTAGTGGTGATGGTACCGTCTTTGCATCC GTTCACCGCATTGGCCCACCACGAAAGAAGCGGCGCCAAGAATCCGAGTCGCAAAGCAGAGAGCCAGCAAGCAAA GAGTCACCGAGCAGACCCACAGAGGTCAAGAAGAAAACGAGAGAAGCTGAACGCGATAGCTTTGCCGCATCTCTT GGAGCGGCTATTAACGAGGTAGCGAAAAGTGCTACTCGAACGATGAAAAATCGTCAGCATCGGAAGGGAGATATC GAAAAAGTCAAAAAGCGACCCAGCGGCGATTCTACTTCGGCGCAGCAAATTGTAGTGAAACCAACCATCAGGGAA AAATCATCGCCATCCTCAATTTCCAAAAGATCCGTCCTTGCCAGAGGTGAAGACCTACCGGATACGACATCACTG TCATCGAAAGGCCCGATCCTCGTGAACGTCGCAGATCTACAAGATATGATAACGAACACGGCAGAACAGGTTGCT AGAAAAATCGTTGAAGACACTTCTTCGACTGCATCGTTAGCAACGAAGACCGCGGTCGCGATGATGACGAGTTTC GCTGCTGCTGGCAAGTTTGTGAACAGTAACACTCAGATGGAGTTTCCTTCCGTAAGCCATTTGGGAGAAGCATCT CAGTCGATTGTCAAACCCATGCCAAAAGGGTCATCCTCCGTTGATCAGCGTCAACGTAATATTTCAATAGAAGAA GATTCAGGGGTCCACTCTAGCGATAACAACCATCATCAGATTCGAGAAACCACCACCACCATCAGTGTCCAATCC TCTTCCAGCCAAGCTCCTCAACTCAAACGACCCTTGGCAACCTCCCGAGGTTTATATACAAATCAGAAAAAACGG CGCGTCTTTGAAGATGAAAATTAA |
Gene | >Agabi119p4|055700 ATGATGATCTCTTCCAAGGGATGGTCAGTTGAATGGTTGCTCAAGAGATCTGAAACCTTCAAGCTTGCTCGCCGC ATTTCTTGCACTGTCGACGACCTGGACAATGTAATTGAACAGTACGAAGAAAGTGATGTCCCTTTGGTCATAGGA GGGTGGCATCAAACCTCCCAGTGGCCGAAAAAGGTCTTCAATATGAACTTCTGTCGACAGTACTTCCGAGAGGAG AATAAGGGTTAGTTAATATAGTTTATCAAAATACGCCTGTCATAATATTGATGTCAAATGCAGAAATATGTGCTC GCAATGTACGCACACGCTCTGACCAGTCCATGACTTTCGAAGACTTTCTCGGGAGATCATATACAACCTCTACGT TCGCAGAACCTGAAGGCATTTATTCAATCAAAATTCCCCCCCTACAATGATACATTTTTTTTGTGTTTTATAGAA ACGCAACGTTGGTATGGAAAGGATATTGAATGTCCTCGTGACTGGGAAGAATGGCTTTCGGGTGAAGGCGTTATT CCTACTCAGTTGTTACCAGGGGGAGGCAACGATCTCTTAGCGCTGAGGCCACAAAGGGTACATTTGTTCCTTTAT TTTTTGTTCTGTTTCTAAAATCACTGACTTGCTCAAAGAATGGGCGTCCAGATGTAGAAACCCTGATGTGCTACT TTGGCATAGGGGACACTTACACGCCTTGTCACAAGGATCAGTGCGCGTCCTCTGGCCAGAACCTCATGTGTTTCA CTGAGGACGGAAGTTCGTCGTTCTGGTTCATGACTAAAGGCTCAGATTGCCCCAAAGTCGCTAATTATTTCCGTA AACTGAAGCGGGAACTCGACCACGAAACGCACGTTATGTCCCTTTCCGACTTAGAGGGGGCTCCTTTCGATATTT ATATCGTAGAGCAAAAGGTTGGAGATTTGGTCCTGGTTCCTCCTCGAAGTTGTCACCAGGTCGTCAATTCCGGAA AGATGACAATTAAAATGTCCTGGTCCCGGATGACGCTATCTGGTTTGGCTGCAGCTTTTTACTACGAACTACCTC TCTATCGCAGGTAAAAATCAACTCTTCTCTTTGCTCTGTGGTGGCGACTAACTTCCCGTAGAGTCTGTCGTCCGG AGACGTACCAAATAAGAAGCACTGTTTATTATGTGCTCACTGACTATACCCGGAAATTAAACACCCTCAGCTCCA AACCATTCAACTCACTCCAAAAGAATATTTTAATCAAGCGTCTCGCGGAAGTTTTGCGACTTTACGGCCATATTC TAATTGAAGAGTATTCCCCATACGGTGATTCCGTTGACACCGACAAGCCTCGATCCAAGGACGAAGAGGAAGGGT CGCCTCTGCAAACTTCAGTATTAGTAGAAGACTTTCATATGTGCGATTTTTGCGGGGCAGACATCTTTCAAAGTT ACTTCCAATGCTCCCAGTCCAGGGGCCCTGAAGCAAGTACCATTATTTGTTCTGGGTGCTACGCGGAAGGTCGAA CGTGTGCTTGCGAAGATATGATCCCAAAGCAACGTCAACAATCTAGCATTCTTTTGTCTGCTCGGTGGGAAGCTT TGGAAGCTCTGAAAAATACGGGGCACTCGATGGAAACTTTCGAAGGCTCAGAATCGCAAGAAGAACAGAAAGGGT TAGTAACTGATATTTCTTCGTCTCCGCCCCATTATTTATTCCATCCTACAGTTTTTTCACCCAGAACTCCAAACG CAGTGTCTTTCAAGCCGCGATGCTAGTACATCAGATGCGGTTGAACGACAAAAAAGTATATCTCCCGAAAGCTAC TTCTGTAGAAATCACTGATTCATTTCATAGCGACCTTTTAGAGCGTGTCGGCCCACCTCAGAGTCGCATCAAGTA CCCGCAAGTTGGGCGATTTCGTGCAAGAAATGTCATTCCTCCAAGTGCTTTCCTCACCTCCTTGACCTGTATCGT ATGCATTGTATCCCCGCCCTGTTTCTCGCCAATCAAAAAGACGATCATGTGGCTTATCATTCGGGTCATGCAGCT AAATTTCCGGACTACCACGTCAGGGAAAAATTCTTTTTAAGAGACCAGGGAGAGAATCCGTCGATTGCACCCGAC TTTGATGTTCAACTAGTGTATAACGCCTCAAAATATCCAATCTGTCAACCCGTCAACACCGCAAATACCCGTATC GGCTGGTATGATCGACTATTGCCGGTATCAAAGGCAAAAACGAAGGAACCAAAGCCTCAGTCACTGCCAACAGGC TCGACGGGGGGTTCGGATAGCGAGGTTGACGAATCTGATGGCCACGGTAAATCTTACTCCCCAACAAACAGCTCT CAAAGGAGTATGAAAAACCATGCGTATGTCGATATCAAGCCCCGAATGTCAACAGGCCCTTCAAAAATCACCTCT GAACAAATGTCTCTTTCATCATTAAGCAGTGATTCTGAAGACTCTGGTTCTGATTATATGTCATCGGTATGGGAA AATCATTACAAAAAGCGTTCATGTTTATTTTAATCTTTTTATCAAGAAGCCATCTCTTAAAAAGGCGCCCAGGCG AAGCTTGCATGGCGGACCGCAGAAGATAGTCGATCTGGAGTCTGGTGCTGGTTCATCTTCAGTCAGTAGGTCGGT AAAAAGGCCAAACGAAACACAGTCGGCAGGGCCTAGTGGTGATGGTACCGTCTTTGCATCCGTTCACCGCATTGG CCCACCACGAAAGAAGCGGCGCCAAGAATCCGAGTCGCAAAGCAGAGAGCCAGCAAGCAAAGAGTCACCGAGCAG ACCCACAGAGGTCAAGAAGAAAACGAGAGAAGCTGAACGCGATAGCTTTGCCGCATCTCTTGGAGCGGCTATTAA CGAGGTAGCGAAAAGTGCTACTCGAACGATGAAAAATCGTCAGCATCGGAAGGGAGATATCGAAAAAGTCAAAAA GCGACCCAGCGGCGATTCTACTTCGGCGCAGCAAATTGTAGTGAAACCAACCATCAGGGAAAAATCATCGCCATC CTCAATTTCCAAAAGATCCGTCCTTGCCAGAGGTGAAGACCTACCGGATACGACATCACTGTCATCGAAAGGCCC GATCCTCGTGAACGTCGCAGATCTACAAGATATGATAACGAACACGGCAGAACAGGTTGCTAGAAAAATCGTTGA AGACACTTCTTCGACTGCATCGTTAGCAACGAAGACCGCGGTCGCGATGATGACGAGTTTCGCTGCTGCTGGCAA GTTTGTGAACAGTAACACTCAGATGGAGTTTCCTTCCGTATGTCCACAGTCCCATTGGAATACATTCATTGGACT TATATTTTTTTCTTTTAGGTAAGCCATTTGGGAGAAGCATCTCAGTCGATTGTCAAACCCATGCCAAAAGGTAAA TTACTCGTAAGAAACACTCCAGTTTCTCTCATTGTTAATCATTCACAAAAGGGTCATCCTCCGTTGATCAGCGTC AACGTAATATTTCAATAGAAGAAGATTCAGGGGTCCACTCTAGCGATAACAACCATCATCAGATTCGAGAAACCA CCACCACCATCAGTGTCCAATCCTCTTCCAGCCAAGCTCCTCAACTCAAACGACCCTTGGCAACCTCCCGAGGTT TATATACAAATCAGAAAAAACGGCGCGTCTTTGAAGATGAAAATTAA |