Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|054390
Gene name
Locationscaffold_03a:493989..494505
Strand-
Gene length (bp)516
Transcript length (bp)351
Coding sequence length (bp)351
Protein length (aa) 117

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01185 Hydrophobin Fungal hydrophobin 1.6E-18 36 112

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P49073|HYP2_AGABI Hydrophobin-2 OS=Agaricus bisporus GN=hypC PE=3 SV=2 1 116 3.0E-65
sp|P49072|HYP1_AGABI Hydrophobin-1 OS=Agaricus bisporus GN=hypA PE=2 SV=1 1 116 3.0E-55
sp|P04158|SC1_SCHCO Fruiting body protein SC1 OS=Schizophyllum commune GN=SC1 PE=2 SV=2 9 116 4.0E-19
sp|P16933|SC3_SCHCO Fruiting body protein SC3 OS=Schizophyllum commune GN=SC3 PE=1 SV=2 1 114 1.0E-16
sp|O13300|HYP3_AGABI Hydrophobin-3 OS=Agaricus bisporus GN=abh3 PE=3 SV=1 1 116 1.0E-14
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Swissprot ID Swissprot Description Start End E-value
sp|P49073|HYP2_AGABI Hydrophobin-2 OS=Agaricus bisporus GN=hypC PE=3 SV=2 1 116 3.0E-65
sp|P49072|HYP1_AGABI Hydrophobin-1 OS=Agaricus bisporus GN=hypA PE=2 SV=1 1 116 3.0E-55
sp|P04158|SC1_SCHCO Fruiting body protein SC1 OS=Schizophyllum commune GN=SC1 PE=2 SV=2 9 116 4.0E-19
sp|P16933|SC3_SCHCO Fruiting body protein SC3 OS=Schizophyllum commune GN=SC3 PE=1 SV=2 1 114 1.0E-16
sp|O13300|HYP3_AGABI Hydrophobin-3 OS=Agaricus bisporus GN=abh3 PE=3 SV=1 1 116 1.0E-14
sp|P52748|HYP1_PISTI Hydrophobin-1 OS=Pisolithus tinctorius GN=HYD-1 PE=2 SV=1 14 115 2.0E-13
sp|P52749|HYP2_PISTI Hydrophobin-2 (Fragment) OS=Pisolithus tinctorius GN=HYD-2 PE=2 SV=1 24 115 3.0E-11
sp|O74300|SC6_SCHCO Hydrophobin-6 OS=Schizophyllum commune GN=SC6 PE=3 SV=1 34 114 5.0E-11
sp|O43122|HYP4_AGABI Hydrophobin-B OS=Agaricus bisporus GN=hypB PE=3 SV=1 3 116 8.0E-11
sp|P16934|SC4_SCHCO Fruiting body protein SC4 OS=Schizophyllum commune GN=SC4 PE=2 SV=1 36 114 7.0E-06
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GO

GO Term Description Terminal node
GO:0005199 structural constituent of cell wall Yes
GO:0009277 fungal-type cell wall Yes
GO:0005198 structural molecule activity No
GO:0030312 external encapsulating structure No
GO:0005618 cell wall No
GO:0110165 cellular anatomical entity No
GO:0003674 molecular_function No
GO:0005575 cellular_component No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.99977

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup3825
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|054390
Agaricus bisporus var bisporus H97 AgabiH97|054390
Agaricus bisporus var burnettii H119p4 Agabi119p4|054390 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|054390
MFSRVLVAALVALPVLVSATPTPGGYPDSTTVVSQCDVGELHCCNTQQTPDHTNAAAAGLLGTAANVGALLGFDC
TPISVIGVGGNNCAAQPVCCEANEFTGLINALSCSPVNINL*
Coding >Agabi119p4|054390
ATGTTCTCTCGCGTTCTTGTCGCAGCTCTTGTTGCTCTCCCCGTTCTCGTTTCTGCAACTCCCACTCCTGGCGGA
TACCCCGACTCCACCACTGTGGTTAGTCAATGCGACGTCGGTGAACTCCACTGCTGCAACACTCAGCAGACTCCC
GACCACACCAACGCCGCTGCCGCCGGCCTGCTTGGTACTGCCGCCAACGTTGGTGCTCTCCTCGGTTTCGACTGT
ACCCCCATTTCCGTCATTGGCGTCGGTGGCAACAACTGTGCCGCTCAGCCTGTCTGCTGTGAAGCAAACGAATTC
ACTGGGTTGATTAATGCTCTTAGCTGCTCTCCCGTCAATATCAACCTTTAG
Transcript >Agabi119p4|054390
ATGTTCTCTCGCGTTCTTGTCGCAGCTCTTGTTGCTCTCCCCGTTCTCGTTTCTGCAACTCCCACTCCTGGCGGA
TACCCCGACTCCACCACTGTGGTTAGTCAATGCGACGTCGGTGAACTCCACTGCTGCAACACTCAGCAGACTCCC
GACCACACCAACGCCGCTGCCGCCGGCCTGCTTGGTACTGCCGCCAACGTTGGTGCTCTCCTCGGTTTCGACTGT
ACCCCCATTTCCGTCATTGGCGTCGGTGGCAACAACTGTGCCGCTCAGCCTGTCTGCTGTGAAGCAAACGAATTC
ACTGGGTTGATTAATGCTCTTAGCTGCTCTCCCGTCAATATCAACCTTTAG
Gene >Agabi119p4|054390
ATGTTCTCTCGCGTTCTTGTCGCAGCTCTTGTTGCTCTCCCCGTTCTCGTTTCTGTAAGTTGACTACCCTCATTG
ACTGAAATCCCTTACTCAACCCTCCATAGGCAACTCCCACTCCTGGCGGATACCCCGACTCCACCACTGTGGTTA
GTCAATGCGACGTCGGTGAACTCCACTGCTGTAAGTATATTCTATGACATCGACGTATTCCATATTCTCAGTGGC
CTTCTTCCAGGCAACACTCAGCAGACTCCCGACCACACCAACGCCGCTGCCGCCGGCCTGCTTGGTACTGCCGCC
AACGTTGGTGCTCTCCTCGGTTTCGACTGTACCCCCATTTCCGTCATTGGCGTCGGTGGCAACAACTGTGCCGCT
CAGCCTGTCTGCTGTGAAGCAAACGAATTCGTAAGTTTGAGCTTTTGGTCTTTGGCTTAAATCTAACATTATTTC
TCTCTCTCTTTTCAGACTGGGTTGATTAATGCTCTTAGCTGCTCTCCCGTCAATATCAACCTTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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