Fungal Genomics

General Properties

Protein ID	Agabi119p4|053540
Gene name
Location	scaffold_03a:260808..262215
Strand	+
Gene length (bp)	1407
Transcript length (bp)	1407
Coding sequence length (bp)	1407
Protein length (aa)	469

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	1.2E-07	2	53

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	3781
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|280800
Agaricus bisporus var bisporus H97	AgabiH97|053540
Agaricus bisporus var burnettii H119p4	Agabi119p4|053540 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|053540 MHALPPELLFMIFRYACFTNNVSDTLTTVRLSHVDRSWRRVTIASPSLWSSITYQSPFGYHHNYVALQKLMTYIE RSGSSPLTLFLHLCNKDDEGFQILLEHSMRWKSLTLRCMHSLVPIVSRLLRKAPVPLLESMCATAFPTGRHQDED SSGPSPASIGQIPCSIFSGGAPKLRLLELGNATVYYMRPVHLETLSTLHFHSSFSDLELSPSELYTILTIPNLTT LTILAEFWELIPDIADISSSRIVMSKLRYLAIRGGSDYEVMRIFATLSCPLVEVLMIQNIFMTTNVYDSPTDIDS RVPEVLKKLHTLHLTDNCEISASLHPFLKQICAPLKELVFDTGASESFALGSILLPLNEDGTVPKIPPIVFPELE TMVIRSVDKRDAQHLMVILPGLEAQGRPVESIAVGPELVDMWSETGHIDGLRKMNVRMLREGEVDVAMPLWVYPP RTLIYSDSEEYPLSPDSD*
Coding	>Agabi119p4|053540 ATGCACGCCCTACCACCAGAGCTACTGTTTATGATCTTCAGATACGCATGTTTTACCAACAACGTGAGCGATACT CTCACAACCGTCCGCCTATCTCATGTCGACCGTTCTTGGCGTCGAGTAACCATCGCTTCACCAAGCCTGTGGTCT AGTATCACGTATCAATCACCTTTCGGTTATCACCATAATTATGTGGCTCTCCAAAAACTTATGACCTACATCGAG CGGTCAGGAAGTAGCCCTCTGACGCTATTCCTTCATCTTTGTAACAAAGATGACGAAGGTTTTCAGATTCTTTTG GAGCACTCCATGCGCTGGAAGTCGCTTACGCTTCGATGCATGCACAGTCTTGTTCCTATTGTTAGCAGGCTCCTT CGAAAAGCGCCAGTTCCTCTTCTTGAATCCATGTGCGCTACGGCGTTTCCTACGGGTCGTCACCAAGATGAAGAT TCATCTGGTCCATCACCAGCTTCAATAGGTCAAATTCCTTGCAGTATTTTCTCAGGCGGCGCGCCCAAGCTACGA CTTTTGGAGCTCGGGAATGCGACCGTGTATTACATGCGACCTGTCCATCTCGAAACTCTCTCCACCCTCCATTTT CACAGCTCATTCAGCGACCTCGAACTATCTCCCTCGGAACTTTACACCATTTTAACCATTCCCAATCTGACGACA CTCACTATCCTAGCCGAGTTCTGGGAACTCATACCCGATATCGCTGATATCTCTTCGTCTCGGATCGTGATGTCT AAACTTCGATACCTCGCCATTCGCGGGGGGAGCGATTACGAAGTCATGCGCATATTCGCTACCTTGTCCTGTCCT CTAGTCGAAGTTCTCATGATACAAAACATCTTCATGACAACCAATGTATACGATTCCCCGACTGACATCGATTCC CGTGTCCCGGAAGTATTAAAGAAACTTCACACATTACATTTAACCGACAATTGCGAAATCTCCGCTTCGTTGCAC CCTTTTTTGAAACAAATCTGTGCACCACTCAAAGAACTCGTATTTGATACCGGAGCTTCCGAATCATTTGCTCTT GGCAGTATCCTATTACCACTCAATGAAGATGGGACTGTACCAAAGATACCGCCTATTGTATTCCCGGAACTTGAG ACGATGGTGATTAGATCTGTGGATAAACGAGATGCGCAGCATTTGATGGTGATTCTTCCTGGTTTGGAGGCGCAG GGTAGACCTGTTGAGAGTATTGCGGTTGGTCCAGAATTGGTGGATATGTGGTCTGAGACTGGACATATAGATGGG TTGAGGAAGATGAATGTGAGAATGCTTAGAGAAGGAGAGGTTGATGTTGCGATGCCGCTGTGGGTTTACCCACCG AGGACGTTGATATATAGCGATTCTGAGGAATACCCGCTATCTCCCGATTCCGATTGA
Transcript	>Agabi119p4|053540 ATGCACGCCCTACCACCAGAGCTACTGTTTATGATCTTCAGATACGCATGTTTTACCAACAACGTGAGCGATACT CTCACAACCGTCCGCCTATCTCATGTCGACCGTTCTTGGCGTCGAGTAACCATCGCTTCACCAAGCCTGTGGTCT AGTATCACGTATCAATCACCTTTCGGTTATCACCATAATTATGTGGCTCTCCAAAAACTTATGACCTACATCGAG CGGTCAGGAAGTAGCCCTCTGACGCTATTCCTTCATCTTTGTAACAAAGATGACGAAGGTTTTCAGATTCTTTTG GAGCACTCCATGCGCTGGAAGTCGCTTACGCTTCGATGCATGCACAGTCTTGTTCCTATTGTTAGCAGGCTCCTT CGAAAAGCGCCAGTTCCTCTTCTTGAATCCATGTGCGCTACGGCGTTTCCTACGGGTCGTCACCAAGATGAAGAT TCATCTGGTCCATCACCAGCTTCAATAGGTCAAATTCCTTGCAGTATTTTCTCAGGCGGCGCGCCCAAGCTACGA CTTTTGGAGCTCGGGAATGCGACCGTGTATTACATGCGACCTGTCCATCTCGAAACTCTCTCCACCCTCCATTTT CACAGCTCATTCAGCGACCTCGAACTATCTCCCTCGGAACTTTACACCATTTTAACCATTCCCAATCTGACGACA CTCACTATCCTAGCCGAGTTCTGGGAACTCATACCCGATATCGCTGATATCTCTTCGTCTCGGATCGTGATGTCT AAACTTCGATACCTCGCCATTCGCGGGGGGAGCGATTACGAAGTCATGCGCATATTCGCTACCTTGTCCTGTCCT CTAGTCGAAGTTCTCATGATACAAAACATCTTCATGACAACCAATGTATACGATTCCCCGACTGACATCGATTCC CGTGTCCCGGAAGTATTAAAGAAACTTCACACATTACATTTAACCGACAATTGCGAAATCTCCGCTTCGTTGCAC CCTTTTTTGAAACAAATCTGTGCACCACTCAAAGAACTCGTATTTGATACCGGAGCTTCCGAATCATTTGCTCTT GGCAGTATCCTATTACCACTCAATGAAGATGGGACTGTACCAAAGATACCGCCTATTGTATTCCCGGAACTTGAG ACGATGGTGATTAGATCTGTGGATAAACGAGATGCGCAGCATTTGATGGTGATTCTTCCTGGTTTGGAGGCGCAG GGTAGACCTGTTGAGAGTATTGCGGTTGGTCCAGAATTGGTGGATATGTGGTCTGAGACTGGACATATAGATGGG TTGAGGAAGATGAATGTGAGAATGCTTAGAGAAGGAGAGGTTGATGTTGCGATGCCGCTGTGGGTTTACCCACCG AGGACGTTGATATATAGCGATTCTGAGGAATACCCGCTATCTCCCGATTCCGATTGA
Gene	>Agabi119p4|053540 ATGCACGCCCTACCACCAGAGCTACTGTTTATGATCTTCAGATACGCATGTTTTACCAACAACGTGAGCGATACT CTCACAACCGTCCGCCTATCTCATGTCGACCGTTCTTGGCGTCGAGTAACCATCGCTTCACCAAGCCTGTGGTCT AGTATCACGTATCAATCACCTTTCGGTTATCACCATAATTATGTGGCTCTCCAAAAACTTATGACCTACATCGAG CGGTCAGGAAGTAGCCCTCTGACGCTATTCCTTCATCTTTGTAACAAAGATGACGAAGGTTTTCAGATTCTTTTG GAGCACTCCATGCGCTGGAAGTCGCTTACGCTTCGATGCATGCACAGTCTTGTTCCTATTGTTAGCAGGCTCCTT CGAAAAGCGCCAGTTCCTCTTCTTGAATCCATGTGCGCTACGGCGTTTCCTACGGGTCGTCACCAAGATGAAGAT TCATCTGGTCCATCACCAGCTTCAATAGGTCAAATTCCTTGCAGTATTTTCTCAGGCGGCGCGCCCAAGCTACGA CTTTTGGAGCTCGGGAATGCGACCGTGTATTACATGCGACCTGTCCATCTCGAAACTCTCTCCACCCTCCATTTT CACAGCTCATTCAGCGACCTCGAACTATCTCCCTCGGAACTTTACACCATTTTAACCATTCCCAATCTGACGACA CTCACTATCCTAGCCGAGTTCTGGGAACTCATACCCGATATCGCTGATATCTCTTCGTCTCGGATCGTGATGTCT AAACTTCGATACCTCGCCATTCGCGGGGGGAGCGATTACGAAGTCATGCGCATATTCGCTACCTTGTCCTGTCCT CTAGTCGAAGTTCTCATGATACAAAACATCTTCATGACAACCAATGTATACGATTCCCCGACTGACATCGATTCC CGTGTCCCGGAAGTATTAAAGAAACTTCACACATTACATTTAACCGACAATTGCGAAATCTCCGCTTCGTTGCAC CCTTTTTTGAAACAAATCTGTGCACCACTCAAAGAACTCGTATTTGATACCGGAGCTTCCGAATCATTTGCTCTT GGCAGTATCCTATTACCACTCAATGAAGATGGGACTGTACCAAAGATACCGCCTATTGTATTCCCGGAACTTGAG ACGATGGTGATTAGATCTGTGGATAAACGAGATGCGCAGCATTTGATGGTGATTCTTCCTGGTTTGGAGGCGCAG GGTAGACCTGTTGAGAGTATTGCGGTTGGTCCAGAATTGGTGGATATGTGGTCTGAGACTGGACATATAGATGGG TTGAGGAAGATGAATGTGAGAATGCTTAGAGAAGGAGAGGTTGATGTTGCGATGCCGCTGTGGGTTTACCCACCG AGGACGTTGATATATAGCGATTCTGAGGAATACCCGCTATCTCCCGATTCCGATTGA