Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|053250
Gene name
Locationscaffold_03a:160129..161436
Strand-
Gene length (bp)1307
Transcript length (bp)660
Coding sequence length (bp)660
Protein length (aa) 220

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00722 Glyco_hydro_16 Glycosyl hydrolases family 16 1.5E-09 7 104

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q8N0N3|BGBP_PENMO Beta-1,3-glucan-binding protein OS=Penaeus monodon PE=2 SV=1 1 214 1.0E-48
sp|Q9NL89|BGBP_BOMMO Beta-1,3-glucan-binding protein OS=Bombyx mori PE=1 SV=1 1 213 1.0E-18
sp|Q9NJ98|BGBP1_MANSE Beta-1,3-glucan-binding protein 1 OS=Manduca sexta PE=1 SV=1 1 213 8.0E-18
sp|P23903|E13B_BACCI Glucan endo-1,3-beta-glucosidase A1 OS=Bacillus circulans GN=glcA PE=1 SV=1 1 160 1.0E-16
sp|Q9NHB0|BGBP1_DROME Gram-negative bacteria-binding protein 1 OS=Drosophila melanogaster GN=GNBP1 PE=2 SV=2 1 213 2.0E-15
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Swissprot ID Swissprot Description Start End E-value
sp|Q8N0N3|BGBP_PENMO Beta-1,3-glucan-binding protein OS=Penaeus monodon PE=2 SV=1 1 214 1.0E-48
sp|Q9NL89|BGBP_BOMMO Beta-1,3-glucan-binding protein OS=Bombyx mori PE=1 SV=1 1 213 1.0E-18
sp|Q9NJ98|BGBP1_MANSE Beta-1,3-glucan-binding protein 1 OS=Manduca sexta PE=1 SV=1 1 213 8.0E-18
sp|P23903|E13B_BACCI Glucan endo-1,3-beta-glucosidase A1 OS=Bacillus circulans GN=glcA PE=1 SV=1 1 160 1.0E-16
sp|Q9NHB0|BGBP1_DROME Gram-negative bacteria-binding protein 1 OS=Drosophila melanogaster GN=GNBP1 PE=2 SV=2 1 213 2.0E-15
sp|Q76DI2|BGBP_TENMO Beta-1,3-glucan-binding protein OS=Tenebrio molitor GN=GRP PE=1 SV=1 1 212 1.0E-13
sp|P45798|GUB_RHOMR Beta-glucanase OS=Rhodothermus marinus GN=bglA PE=1 SV=1 1 163 2.0E-13
sp|Q8ISB6|BGBP2_MANSE Beta-1,3-glucan-binding protein 2 OS=Manduca sexta PE=1 SV=1 1 213 5.0E-13
sp|O96363|BGBP_HYPCU Beta-1,3-glucan-binding protein (Fragment) OS=Hyphantria cunea GN=gnbp1 PE=2 SV=1 1 212 2.0E-12
sp|Q9NHA8|BGBP3_DROME Gram-negative bacteria-binding protein 3 OS=Drosophila melanogaster GN=GNBP3 PE=1 SV=2 1 213 2.0E-11
sp|Q8MU95|BGBP_PLOIN Beta-1,3-glucan-binding protein OS=Plodia interpunctella PE=1 SV=1 1 213 1.0E-10
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GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0016787 hydrolase activity No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0071704 organic substance metabolic process No
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|053250
MPTGDWLWPAIWMLPKDEVYGPWPLSGEIDILESRGNNIRYTARGSNYVQGSLNWGPTQILNGVSKSYSWWQERR
KSFGSEFRTYALEWTDKWLRIYVDNRLHTLLDIKFDKPFFERGEFPEVIFDGPNPVALKNPWINGTNVTPFDQEF
YLILNVAVGGTNGWFPDVQGDKPWLDASQNAMRDFALAQSQWYPTWPTNVEDRAMVVDYVKMWKHCDGN*
Coding >Agabi119p4|053250
ATGCCAACTGGTGATTGGCTCTGGCCTGCTATTTGGATGCTTCCCAAGGACGAAGTTTATGGACCGTGGCCTCTG
AGTGGTGAAATCGATATCTTAGAATCCCGAGGAAATAACATTCGGTACACAGCACGCGGTTCGAACTATGTCCAA
GGATCACTCAATTGGGGACCTACACAAATTTTGAATGGAGTATCTAAATCTTATAGTTGGTGGCAAGAACGTCGC
AAGTCTTTCGGAAGCGAATTTCGTACATATGCTTTGGAATGGACAGATAAATGGCTACGCATCTATGTTGATAAC
CGGCTTCACACTCTTCTCGATATCAAGTTTGATAAACCCTTCTTTGAGAGAGGTGAATTCCCTGAGGTGATCTTT
GATGGACCGAATCCGGTTGCTTTGAAGAATCCTTGGATTAATGGAACGAATGTGACTCCTTTTGATCAAGAATTC
TACTTGATTTTGAATGTCGCTGTTGGTGGAACGAATGGATGGTTCCCTGACGTGCAGGGAGATAAACCTTGGTTG
GATGCCTCGCAGAATGCTATGCGAGATTTTGCTTTGGCTCAATCACAGTGGTATCCCACTTGGCCTACTAATGTT
GAAGATCGGGCTATGGTCGTTGATTATGTCAAGATGTGGAAACATTGCGATGGAAATTAA
Transcript >Agabi119p4|053250
ATGCCAACTGGTGATTGGCTCTGGCCTGCTATTTGGATGCTTCCCAAGGACGAAGTTTATGGACCGTGGCCTCTG
AGTGGTGAAATCGATATCTTAGAATCCCGAGGAAATAACATTCGGTACACAGCACGCGGTTCGAACTATGTCCAA
GGATCACTCAATTGGGGACCTACACAAATTTTGAATGGAGTATCTAAATCTTATAGTTGGTGGCAAGAACGTCGC
AAGTCTTTCGGAAGCGAATTTCGTACATATGCTTTGGAATGGACAGATAAATGGCTACGCATCTATGTTGATAAC
CGGCTTCACACTCTTCTCGATATCAAGTTTGATAAACCCTTCTTTGAGAGAGGTGAATTCCCTGAGGTGATCTTT
GATGGACCGAATCCGGTTGCTTTGAAGAATCCTTGGATTAATGGAACGAATGTGACTCCTTTTGATCAAGAATTC
TACTTGATTTTGAATGTCGCTGTTGGTGGAACGAATGGATGGTTCCCTGACGTGCAGGGAGATAAACCTTGGTTG
GATGCCTCGCAGAATGCTATGCGAGATTTTGCTTTGGCTCAATCACAGTGGTATCCCACTTGGCCTACTAATGTT
GAAGATCGGGCTATGGTCGTTGATTATGTCAAGATGTGGAAACATTGCGATGGAAATTAA
Gene >Agabi119p4|053250
ATGCCAACTGGGTGCGTGTTTCTTTATTTGATTAGCTTAGGTGTTCGTCGTGCTTATTGTCTTTTAGTGATTGGG
TGAGTCTCTATATCGACTTGAAAGATTTAAACTTTCTTATTCTTTTTTCCCTTCTAGCTCTGGCCTGCTATTTGG
ATGCTTCCCAAGGACGAAGTTTATGGACCGTGGCCTCTGAGTGGTGAAATCGATATCTTAGAATCCCGAGGAAAT
AACATTCGGTACACAGCACGGTGAGTATAACCCTCCGAGTGGCTATCCCCTTTATACTCAAGTTCTTTTCTTCTC
ATACAGCGGTTCGAACTATGTCCAAGGATCACTCAATTGGGGACCTACACAAATTTTGAATGGAGTATCTAAATC
TTATAGTTGGTGGCAAGAACGTCGCAAGTCTTTCGGAAGCGAATTTCGTACATATGCTTTGGAATGGACAGATAA
ATGGCTGTGCGCACTTTTTTTTTTTTCGCTTCCAACTCATTCCAAAAGCTGATTCGCGAGTTTTTTTTCTTTTGC
CATCGTTGAACCACCTATTGCGTCATTTGCTAATTCTTCTTTTTACATCCCAACCCCCCACGAATTCGAACCCCT
TCTAAAACCCACCTAATCGATGATTCGAATTTACATTACACGAATTTGATTGGCAATAATGAAACCTACACGAAC
CCACCTCTTAATATCGGAAAAAAAGACGCATCTATGTTGATAACCGGCTTCACACTCTTCTCGATATCAAGTTTG
ATAAACCCTTCTTTGAGAGAGGTGAATTCCCTGAGGTGATCTTTGATGGACCGAATCCGGTTGCTTTGAAGAATC
CTTGGATTAATGGAACGAATGTGACTCCTTTTGATCAAGGTATGTATCATGTTTCCCGTCGGAATAGAGTTTTTC
TTTTCGGAGGAATGTTGTTGATTGATTATTTACGAAAACATCTTTCTAGAATTCTACTTGATTTTGAATGTCGCT
GTTGGTGGAACGAATGGATGGTTCCCTGACGTGCAGGGAGATAAACCTTGGTTGGATGCCTCGCAGAGTATGTAT
TATCGATTCCTCACACACTTTTACAACAAGTTTTTGTAATAACCCTCTCCGTTTAGATGCTATGCGAGATTTTGC
TTTGGCTCAATCACAGTGGTATCCCACTTGGCCTACTAATGTTGAAGATCGGGCTATGGTCGTGTATGTTCTTTT
CTTTCCAGTATATCTATCATTTTGTTCTCGTTACTAATGCTGGCGTTTTTCTTTCTTTTTTAAAAAGTGATTATG
TCAAGATGTGGAAACATTGCGATGGAAATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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