Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|052250
Gene name
Locationscaffold_02:3152818..3153557
Strand-
Gene length (bp)739
Transcript length (bp)618
Coding sequence length (bp)618
Protein length (aa) 206

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 3.6E-06 52 105

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|052250
MNFKLLSAIAFVSLVAAQSDPTTVVSPTPSGTENTGTPTAAPSGAPGPAVPIPECVQTCLDQSGCEATDVTCACT
TGLESLTMCVMTNCSPEEQQAAADLQQTLCPATSGGMSGGVNSTMVTGSATTQDATMSGSGVTPSVPATTNTVTT
PSGTLTTRPLTTNSAPSTTNTADSSNNSNAAAPQNVVTQGIWVMLAGLIGVAVAA*
Coding >Agabi119p4|052250
ATGAACTTCAAGCTCCTCTCCGCCATCGCTTTTGTTTCCCTTGTCGCCGCTCAAAGCGACCCCACTACCGTCGTA
TCCCCAACACCCAGTGGTACCGAGAATACTGGCACCCCTACTGCTGCCCCTTCGGGTGCACCTGGGCCAGCAGTT
CCTATTCCTGAATGTGTCCAGACTTGCCTTGATCAATCAGGTTGTGAAGCTACTGATGTGACTTGTGCCTGCACC
ACTGGTCTCGAGAGTTTAACCATGTGTGTAATGACCAACTGTAGCCCAGAGGAACAACAGGCTGCTGCCGATCTT
CAACAAACTCTCTGCCCTGCTACCAGTGGAGGAATGTCAGGTGGTGTAAATTCGACTATGGTCACCGGATCTGCA
ACGACCCAAGATGCTACTATGAGTGGCTCTGGCGTTACACCCTCTGTCCCGGCTACCACTAACACCGTCACGACC
CCATCCGGCACTTTAACTACCAGACCACTTACCACCAACTCAGCTCCGTCAACTACAAACACAGCCGATTCTTCC
AACAACTCCAATGCGGCTGCTCCACAAAACGTCGTCACTCAGGGAATCTGGGTCATGCTTGCTGGTTTGATTGGG
GTTGCTGTTGCGGCTTGA
Transcript >Agabi119p4|052250
ATGAACTTCAAGCTCCTCTCCGCCATCGCTTTTGTTTCCCTTGTCGCCGCTCAAAGCGACCCCACTACCGTCGTA
TCCCCAACACCCAGTGGTACCGAGAATACTGGCACCCCTACTGCTGCCCCTTCGGGTGCACCTGGGCCAGCAGTT
CCTATTCCTGAATGTGTCCAGACTTGCCTTGATCAATCAGGTTGTGAAGCTACTGATGTGACTTGTGCCTGCACC
ACTGGTCTCGAGAGTTTAACCATGTGTGTAATGACCAACTGTAGCCCAGAGGAACAACAGGCTGCTGCCGATCTT
CAACAAACTCTCTGCCCTGCTACCAGTGGAGGAATGTCAGGTGGTGTAAATTCGACTATGGTCACCGGATCTGCA
ACGACCCAAGATGCTACTATGAGTGGCTCTGGCGTTACACCCTCTGTCCCGGCTACCACTAACACCGTCACGACC
CCATCCGGCACTTTAACTACCAGACCACTTACCACCAACTCAGCTCCGTCAACTACAAACACAGCCGATTCTTCC
AACAACTCCAATGCGGCTGCTCCACAAAACGTCGTCACTCAGGGAATCTGGGTCATGCTTGCTGGTTTGATTGGG
GTTGCTGTTGCGGCTTGA
Gene >Agabi119p4|052250
ATGAACTTCAAGCTCCTCTCCGCCATCGCTTTTGTTTCCCTTGTCGCCGCTCAAAGCGACCCCACTACCGTCGTA
TCCCCAACACCCAGTGGTACCGAGAATACTGGCACCCCTACTGCTGCCCCTTCGGGTGCACCTGGGCCAGCAGTT
CCTATTCCTGAATGTGTCCAGACTTGCCTTGATCAATCAGGTTGTGAAGCGTATGTTTATCCGCACTGCTTTGGC
GATACTCAAATAGCTTATTTTTCTCCCCTCTTGTATAGTACTGATGTGACTTGTGCCTGCACCACTGGTCTCGAG
AGTTTAACCATGTGTGTAATGACCAACTGTAGCCCAGAGGAACAACAGGCTGCTGCCGATCTTCAACAAACTCTC
TGCCGTAAGTTGAATAAAAATATCTAACCTGACTGTATTCTGATTTTAATTGGCCATTCCAGCTGCTACCAGTGG
AGGAATGTCAGGTGGTGTAAATTCGACTATGGTCACCGGATCTGCAACGACCCAAGATGCTACTATGAGTGGCTC
TGGCGTTACACCCTCTGTCCCGGCTACCACTAACACCGTCACGACCCCATCCGGCACTTTAACTACCAGACCACT
TACCACCAACTCAGCTCCGTCAACTACAAACACAGCCGATTCTTCCAACAACTCCAATGCGGCTGCTCCACAAAA
CGTCGTCACTCAGGGAATCTGGGTCATGCTTGCTGGTTTGATTGGGGTTGCTGTTGCGGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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