Fungal Genomics

General Properties

Protein ID	Agabi119p4|049060
Gene name
Location	scaffold_02:2507931..2508299
Strand	+
Gene length (bp)	368
Transcript length (bp)	258
Coding sequence length (bp)	258
Protein length (aa)	86

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	3.0E-08	11	55
PF00646	F-box	F-box domain	2.3E-05	12	52

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	3628
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|049060
Agaricus bisporus var bisporus H97	AgabiH97|049060
Agaricus bisporus var burnettii H119p4	Agabi119p4|049060 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|049060 MTTRLPEKPCITSLPIEIIWRIFMQLDYPSLLAIKQICKVFHSITNTRQFWHDYVKKLCEDYEMTPPKEEIEEYN EMELERWALQ*
Coding	>Agabi119p4|049060 ATGACTACTAGGTTGCCTGAAAAGCCTTGCATCACTTCTCTACCTATTGAAATCATATGGCGAATTTTCATGCAA TTGGACTACCCAAGCCTGCTTGCAATCAAACAAATTTGCAAAGTTTTCCATTCAATTACGAATACCCGCCAATTT TGGCATGATTATGTTAAGAAGCTCTGTGAAGACTATGAAATGACTCCTCCCAAAGAAGAAATCGAAGAGTATAAT GAAATGGAGCTGGAACGATGGGCCTTGCAATGA
Transcript	>Agabi119p4|049060 ATGACTACTAGGTTGCCTGAAAAGCCTTGCATCACTTCTCTACCTATTGAAATCATATGGCGAATTTTCATGCAA TTGGACTACCCAAGCCTGCTTGCAATCAAACAAATTTGCAAAGTTTTCCATTCAATTACGAATACCCGCCAATTT TGGCATGATTATGTTAAGAAGCTCTGTGAAGACTATGAAATGACTCCTCCCAAAGAAGAAATCGAAGAGTATAAT GAAATGGAGCTGGAACGATGGGCCTTGCAATGA
Gene	>Agabi119p4|049060 ATGACTACTAGGTTGCCTGGTGAGCTATCGACTTTGTCGTTCATACCCACTCTCACCTACGTCGTAAAGAAAAGC CTTGCATCACTTCTCTACCTATTGAAATCATATGGCGAATTTTCATGCAATTGGACTACCCAAGCCTGCTTGCAA TCAAACAAGCGCGTCCTCTTTTTCTACTCTCGTATTGCAAGCGCAATACCGCTTATTTCGACAAGTAGATTTGCA AAGTTTTCCATTCAATTACGAATACCCGCCAATTTTGGCATGATTATGTTAAGAAGCTCTGTGAAGACTATGAAA TGACTCCTCCCAAAGAAGAAATCGAAGAGTATAATGAAATGGAGCTGGAACGATGGGCCTTGCAATGA