© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|048560 |
| Gene name | |
| Location | scaffold_02:2422050..2422997 |
| Strand | - |
| Gene length (bp) | 947 |
| Transcript length (bp) | 774 |
| Coding sequence length (bp) | 774 |
| Protein length (aa) | 258 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10153 | Efg1 | rRNA-processing protein Efg1 | 2.7E-38 | 48 | 160 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A8N5J5|EFG1P_COPC7 | rRNA-processing protein EFG1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=EFG1 PE=3 SV=1 | 1 | 250 | 3.0E-68 |
| sp|P0CN34|EFG1P_CRYNJ | rRNA-processing protein EFG1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=EFG1 PE=3 SV=1 | 40 | 161 | 8.0E-31 |
| sp|P0CN35|EFG1P_CRYNB | rRNA-processing protein EFG1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=EFG1 PE=3 SV=1 | 40 | 161 | 8.0E-31 |
| sp|A7EPT0|EFG1P_SCLS1 | rRNA-processing protein efg1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=efg1 PE=3 SV=1 | 39 | 201 | 2.0E-23 |
| sp|A5DID3|EFG1P_PICGU | rRNA-processing protein EFG1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=EFG1 PE=3 SV=2 | 44 | 247 | 1.0E-22 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A8N5J5|EFG1P_COPC7 | rRNA-processing protein EFG1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=EFG1 PE=3 SV=1 | 1 | 250 | 3.0E-68 |
| sp|P0CN34|EFG1P_CRYNJ | rRNA-processing protein EFG1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=EFG1 PE=3 SV=1 | 40 | 161 | 8.0E-31 |
| sp|P0CN35|EFG1P_CRYNB | rRNA-processing protein EFG1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=EFG1 PE=3 SV=1 | 40 | 161 | 8.0E-31 |
| sp|A7EPT0|EFG1P_SCLS1 | rRNA-processing protein efg1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=efg1 PE=3 SV=1 | 39 | 201 | 2.0E-23 |
| sp|A5DID3|EFG1P_PICGU | rRNA-processing protein EFG1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=EFG1 PE=3 SV=2 | 44 | 247 | 1.0E-22 |
| sp|A6RVU0|EFG1P_BOTFB | rRNA-processing protein efg1 OS=Botryotinia fuckeliana (strain B05.10) GN=efg1 PE=3 SV=1 | 39 | 201 | 2.0E-22 |
| sp|A3LNR4|EFG1P_PICST | rRNA-processing protein EFG1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=EFG1 PE=3 SV=1 | 44 | 247 | 2.0E-22 |
| sp|Q5AK42|EFG1P_CANAL | rRNA-processing protein EFG1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CaO19.11461 PE=3 SV=1 | 38 | 201 | 2.0E-22 |
| sp|Q4PFU7|EFG1P_USTMA | rRNA-processing protein EFG1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=EFG1 PE=3 SV=1 | 47 | 254 | 6.0E-22 |
| sp|Q09867|EFG1P_SCHPO | rRNA-processing protein efg1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=efg1 PE=3 SV=2 | 42 | 160 | 6.0E-22 |
| sp|Q0U913|EFG1P_PHANO | rRNA-processing protein EFG1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=EFG1 PE=3 SV=1 | 1 | 201 | 1.0E-21 |
| sp|A5E2Z7|EFG1P_LODEL | rRNA-processing protein EFG1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=EFG1 PE=3 SV=1 | 46 | 247 | 3.0E-21 |
| sp|Q6CXA6|EFG1P_KLULA | rRNA-processing protein EFG1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=EFG1 PE=3 SV=1 | 24 | 224 | 4.0E-21 |
| sp|Q75D81|EFG1P_ASHGO | rRNA-processing protein EFG1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=EFG1 PE=3 SV=2 | 44 | 225 | 5.0E-21 |
| sp|Q1E0G9|EFG1P_COCIM | rRNA-processing protein EFG1 OS=Coccidioides immitis (strain RS) GN=EFG1 PE=3 SV=1 | 42 | 201 | 1.0E-20 |
| sp|Q6BH91|EFG1P_DEBHA | rRNA-processing protein EFG1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=EFG1 PE=3 SV=1 | 44 | 161 | 3.0E-19 |
| sp|A7TMK6|EFG1P_VANPO | rRNA-processing protein EFG1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=EFG1 PE=3 SV=1 | 44 | 161 | 5.0E-19 |
| sp|A6RBE9|EFG1P_AJECN | rRNA-processing protein EFG1 OS=Ajellomyces capsulatus (strain NAm1 / WU24) GN=EFG1 PE=3 SV=1 | 43 | 170 | 7.0E-18 |
| sp|Q3E705|EFG1P_YEAST | rRNA-processing protein EFG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EFG1 PE=1 SV=2 | 44 | 247 | 8.0E-18 |
| sp|A6ZUS8|EFG1P_YEAS7 | rRNA-processing protein EFG1 OS=Saccharomyces cerevisiae (strain YJM789) GN=EFG1 PE=3 SV=1 | 44 | 247 | 8.0E-18 |
| sp|Q6FTQ8|EFG1P_CANGA | rRNA-processing protein EFG1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=EFG1 PE=3 SV=1 | 21 | 194 | 1.0E-16 |
| sp|Q5B4J6|EFG1P_EMENI | rRNA-processing protein efg1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=efg1 PE=3 SV=1 | 39 | 201 | 3.0E-16 |
| sp|Q0C9M9|EFG1P_ASPTN | rRNA-processing protein efg1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=efg1 PE=3 SV=1 | 39 | 201 | 7.0E-16 |
| sp|Q7RYN6|EFG1P_NEUCR | rRNA-processing protein efg1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=efg1 PE=3 SV=1 | 15 | 161 | 1.0E-15 |
| sp|A2QNW5|EFG1P_ASPNC | rRNA-processing protein efg1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=efg1 PE=3 SV=1 | 39 | 166 | 1.0E-14 |
| sp|Q2UEF7|EFG1P_ASPOR | rRNA-processing protein efg1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=efg1 PE=3 SV=1 | 39 | 201 | 4.0E-14 |
| sp|Q4WI71|EFG1P_ASPFU | rRNA-processing protein efg1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=efg1 PE=3 SV=1 | 39 | 201 | 4.0E-13 |
| sp|Q6CFG6|EFG1P_YARLI | rRNA-processing protein EFG1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=EFG1 PE=3 SV=1 | 34 | 247 | 6.0E-13 |
| sp|A1CF47|EFG1P_ASPCL | rRNA-processing protein efg1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=efg1 PE=3 SV=1 | 43 | 160 | 2.0E-12 |
| sp|Q2H6A9|EFG1P_CHAGB | rRNA-processing protein EFG1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=EFG1 PE=3 SV=1 | 45 | 160 | 5.0E-12 |
| sp|A4RMA9|EFG1P_MAGO7 | rRNA-processing protein EFG1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=EFG1 PE=3 SV=1 | 33 | 161 | 4.0E-11 |
| sp|A1CYY6|EFG1P_NEOFI | rRNA-processing protein efg1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=efg1 PE=3 SV=2 | 43 | 201 | 6.0E-11 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006364 | rRNA processing | Yes |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0034470 | ncRNA processing | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0006396 | RNA processing | No |
| GO:0044238 | primary metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0016072 | rRNA metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0016070 | RNA metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0034660 | ncRNA metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| Orthofinder run ID | 5 |
| Orthogroup | 3609 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Agaricus bisporus var bisporus H39 | AgabiH39|048560 |
| Agaricus bisporus var bisporus H97 | AgabiH97|048560 |
| Agaricus bisporus var burnettii H119p4 | Agabi119p4|048560 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|048560 MAPIRTHDSRPQTSNSAGKFKHKKAPRQQRNLRKELDTESAAPGVSKIKSSLRQTRRLLAKDKLAADVRVETERR LKALEGELAQAEVANKERTMATRYHKIKFFERQKVTRKISQIQKQIASTEDDPTKEKLLRTLYERRVDLNYILHY PKLKKYISLFPPEIRKGEQPSTASAKDAAETAQGREEVRSWVRSCMEKGELSGEPERYEASIKSKRKDFDSSNMS SKTKPHRIQEESKKAIEEDDFFGNDDDDDKDS* |
| Coding | >Agabi119p4|048560 ATGGCACCCATACGAACCCATGATTCCAGACCACAAACATCAAACTCTGCTGGAAAGTTTAAGCACAAAAAGGCG CCTCGACAGCAACGAAATTTAAGGAAGGAGCTCGATACAGAGTCGGCTGCACCAGGCGTTTCCAAAATTAAGTCA TCACTACGACAGACACGAAGGCTACTTGCAAAGGACAAACTTGCAGCTGATGTTCGAGTCGAGACGGAACGGCGG CTGAAGGCACTCGAAGGAGAATTAGCACAAGCCGAGGTTGCAAATAAGGAACGGACGATGGCAACACGATATCAT AAAATCAAGTTTTTTGAACGTCAAAAAGTGACACGAAAAATCTCTCAAATCCAAAAACAGATAGCTTCTACCGAA GACGACCCGACGAAAGAGAAACTTTTGCGGACATTGTACGAACGTCGAGTGGACTTGAACTATATTCTTCATTAT CCAAAACTCAAAAAATACATCTCCCTCTTCCCACCCGAGATTCGCAAGGGTGAACAGCCATCGACAGCGTCCGCG AAGGATGCAGCGGAGACTGCGCAAGGACGAGAAGAAGTTCGTAGCTGGGTGAGATCATGCATGGAGAAAGGTGAA CTATCGGGAGAACCGGAAAGATACGAAGCATCCATCAAATCAAAACGAAAAGATTTTGATAGTAGTAACATGTCA AGCAAGACAAAACCTCATCGAATACAGGAAGAGTCGAAAAAGGCAATTGAGGAGGATGATTTCTTCGGTAACGAC GATGACGACGACAAAGACTCATAG |
| Transcript | >Agabi119p4|048560 ATGGCACCCATACGAACCCATGATTCCAGACCACAAACATCAAACTCTGCTGGAAAGTTTAAGCACAAAAAGGCG CCTCGACAGCAACGAAATTTAAGGAAGGAGCTCGATACAGAGTCGGCTGCACCAGGCGTTTCCAAAATTAAGTCA TCACTACGACAGACACGAAGGCTACTTGCAAAGGACAAACTTGCAGCTGATGTTCGAGTCGAGACGGAACGGCGG CTGAAGGCACTCGAAGGAGAATTAGCACAAGCCGAGGTTGCAAATAAGGAACGGACGATGGCAACACGATATCAT AAAATCAAGTTTTTTGAACGTCAAAAAGTGACACGAAAAATCTCTCAAATCCAAAAACAGATAGCTTCTACCGAA GACGACCCGACGAAAGAGAAACTTTTGCGGACATTGTACGAACGTCGAGTGGACTTGAACTATATTCTTCATTAT CCAAAACTCAAAAAATACATCTCCCTCTTCCCACCCGAGATTCGCAAGGGTGAACAGCCATCGACAGCGTCCGCG AAGGATGCAGCGGAGACTGCGCAAGGACGAGAAGAAGTTCGTAGCTGGGTGAGATCATGCATGGAGAAAGGTGAA CTATCGGGAGAACCGGAAAGATACGAAGCATCCATCAAATCAAAACGAAAAGATTTTGATAGTAGTAACATGTCA AGCAAGACAAAACCTCATCGAATACAGGAAGAGTCGAAAAAGGCAATTGAGGAGGATGATTTCTTCGGTAACGAC GATGACGACGACAAAGACTCATAG |
| Gene | >Agabi119p4|048560 ATGGCACCCATACGAACCCATGATTCCAGACCACAAACATCAAACTCTGCTGGAAAGTTTAAGCACAAAAAGGCG CCTCGACAGCAACGAAATTTAAGGAAGGAGCTCGATACAGAGTCGGCTGCACCAGGCGTTTCCAAAATTAAGTCA TCACTACGACAGACACGAAGGCTACTTGCAAAGGTATATCTTCCATTTACTGCGTTACGTTTTTATCGTATGAAC ATTGTGCCATTTGTAGGACAAACTTGCAGCTGATGTTCGAGTCGAGACGGAACGGCGGCTGAAGGCACTCGAAGG AGAATTAGCACAAGCCGAGGTTGCAAATAAGGAACGGACGATGGCAACACGATATCATAAAATCAAGTTTTTTGG TATGTGAAGTTCATGTTCTCGCAGTATTACTCAAAGCTAATAAATGCCTACTTAGAACGTCAAAAAGTGACACGA AAAATCTCTCAAATCCAAAAACAGATAGCTTCTACCGAAGACGACCCGACGAAAGAGAAACTTTTGCGGACATTG TACGAACGTCGAGTGGACTTGAACTATATTCTTGTGGGATCCATCTTATGTTCTGTAGGCATACTCGAAAGCTGA CTTTTCATGTCGAATAGCATTATCCAAAACTCAAAAAATACATCTCCCTCTTCCCACCCGAGATTCGCAAGGGTG AACAGCCATCGACAGCGTCCGCGAAGGATGCAGCGGAGACTGCGCAAGGACGAGAAGAAGTTCGTAGCTGGGTGA GATCATGCATGGAGAAAGGTGAACTATCGGGAGAACCGGAAAGATACGAAGCATCCATCAAATCAAAACGAAAAG ATTTTGATAGTAGTAACATGTCAAGCAAGACAAAACCTCATCGAATACAGGAAGAGTCGAAAAAGGCAATTGAGG AGGATGATTTCTTCGGTAACGACGATGACGACGACAAAGACTCATAG |