Fungal Genomics

General Properties

Protein ID	Agabi119p4|046260
Gene name
Location	scaffold_02:1776818..1778947
Strand	+
Gene length (bp)	2129
Transcript length (bp)	1716
Coding sequence length (bp)	1716
Protein length (aa)	572

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13639	zf-RING_2	Ring finger domain	3.5E-11	437	482
PF17123	zf-RING_11	RING-like zinc finger	3.2E-07	438	467
PF12861	zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	5.3E-06	437	486

Swissprot hits

GO

GO Term	Description	Terminal node
GO:0061630	ubiquitin protein ligase activity	Yes
GO:0005680	anaphase-promoting complex	Yes
GO:0097602	cullin family protein binding	Yes
GO:0008270	zinc ion binding	Yes
GO:0031145	anaphase-promoting complex-dependent catabolic process	Yes
GO:0005488	binding	No
GO:0005515	protein binding	No
GO:0044265	cellular macromolecule catabolic process	No
GO:0043169	cation binding	No
GO:0140096	catalytic activity, acting on a protein	No
GO:0046872	metal ion binding	No
GO:0019538	protein metabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0004842	ubiquitin-protein transferase activity	No
GO:0044238	primary metabolic process	No
GO:1901565	organonitrogen compound catabolic process	No
GO:1990234	transferase complex	No
GO:0009056	catabolic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	No
GO:0032991	protein-containing complex	No
GO:0061659	ubiquitin-like protein ligase activity	No
GO:0008152	metabolic process	No
GO:0016740	transferase activity	No
GO:0003674	molecular_function	No
GO:0019941	modification-dependent protein catabolic process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0003824	catalytic activity	No
GO:0030163	protein catabolic process	No
GO:0008150	biological_process	No
GO:0046914	transition metal ion binding	No
GO:1902494	catalytic complex	No
GO:0043632	modification-dependent macromolecule catabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0006511	ubiquitin-dependent protein catabolic process	No
GO:0043167	ion binding	No
GO:0044237	cellular metabolic process	No
GO:1901575	organic substance catabolic process	No
GO:0000152	nuclear ubiquitin ligase complex	No
GO:0006508	proteolysis	No
GO:0009057	macromolecule catabolic process	No
GO:0044248	cellular catabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0000151	ubiquitin ligase complex	No
GO:0140513	nuclear protein-containing complex	No
GO:0051603	proteolysis involved in protein catabolic process	No
GO:0010498	proteasomal protein catabolic process	No
GO:0019787	ubiquitin-like protein transferase activity	No
GO:0031461	cullin-RING ubiquitin ligase complex	No
GO:0140535	intracellular protein-containing complex	No
GO:0009987	cellular process	No
GO:0005575	cellular_component	No

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 14	0.999713

Transmembrane Domains

Domain #	Start	End	Length
1	246	268	22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	3426
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|046260
Agaricus bisporus var bisporus H97	AgabiH97|046260
Agaricus bisporus var burnettii H119p4	Agabi119p4|046260 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|046260 MVLLLLLLAALAAAYIPASPTNSTQDAIAGGLNITDISKLRLQWYSNGNYVENISYQLAGNGTSGISKGILIHFS EESVNETIPPTSAPWIAMVSCDANATDASMDVDIFTLARDKGAVAALLYSLRSLACVINPEYANPATFDQVFDIF STQSKTSARLIDYQFGQLAPANSSITKYDSQRLNNTAEAVRDSIQAGHATRPGFLYAELRAYNATGDTNDPVVTG SNSGDSTGSGTGSKNTALAMIVLYAITGCVSALFCIVIISGAVRALRHPERYGPRARIGLDGPPQGRARGLTRAI LDTFPIVKFGGSRDRPVDSAMDTANSIKDMEAQDISQWELLDITDAKRESTFKLDEVNATVGCTASQAIEMDDEK TRLSRSSTPGPCSPQILPSREEDRGEGSSTPKPTSSKPQLSDKPGMMPVRHDLSPEAMGRETCPICIVDFEKGDD IRVLPCEGKHRFHPECVDQWLLQLSSSCPICRQDFMALADMMSYEDDRESQELGIDGFEPDSPDEDRRSYHQSLS PQRSASSPGSSRFSRYLHFASGRRNRRQQREQGAPVQEELVQEQSR*
Coding	>Agabi119p4|046260 ATGGTACTCCTTCTCCTCCTCCTTGCCGCACTCGCCGCCGCCTATATCCCAGCCTCTCCCACAAATTCTACCCAG GACGCCATTGCTGGTGGACTCAACATCACCGACATATCCAAACTTCGCCTCCAGTGGTATTCAAACGGTAATTAC GTTGAAAACATCTCTTATCAACTCGCTGGCAATGGTACTAGTGGTATCAGTAAGGGCATTTTGATTCATTTTTCC GAAGAGTCCGTCAATGAAACGATCCCACCGACGTCTGCACCCTGGATTGCAATGGTCTCTTGCGATGCCAACGCC ACCGATGCATCAATGGATGTCGATATCTTCACCCTGGCACGCGACAAGGGTGCAGTCGCAGCTTTGTTGTATTCT CTGCGTTCGCTCGCTTGTGTAATTAATCCAGAATATGCGAACCCGGCAACTTTCGATCAGGTCTTCGATATTTTT TCGACCCAAAGCAAAACCAGCGCCCGCCTCATTGATTATCAGTTCGGTCAGCTGGCACCGGCGAACAGCAGCATC ACCAAATATGATTCACAGCGCCTCAATAACACGGCGGAGGCTGTTAGAGACTCCATTCAGGCCGGTCATGCCACG CGGCCAGGGTTTCTGTACGCGGAATTGCGAGCATACAATGCTACCGGAGATACGAACGATCCTGTCGTCACTGGT TCGAATAGTGGGGACTCGACTGGGAGTGGCACTGGTTCCAAAAATACTGCGCTTGCAATGATAGTTCTCTATGCG ATCACCGGGTGTGTCTCCGCCCTTTTTTGCATTGTGATCATTTCAGGAGCCGTTCGTGCACTACGTCATCCTGAA CGTTACGGACCCCGGGCCAGAATCGGCTTAGATGGTCCACCACAGGGTCGCGCCAGGGGTCTCACTCGTGCCATA CTTGACACGTTTCCTATTGTCAAGTTTGGAGGGAGCCGTGACAGACCAGTTGATTCCGCCATGGATACGGCAAAT TCTATTAAGGATATGGAGGCTCAGGACATCAGCCAGTGGGAGCTTCTGGACATTACGGACGCTAAGAGGGAGAGC ACATTTAAACTCGATGAGGTCAATGCAACTGTGGGTTGTACGGCCAGTCAGGCCATTGAAATGGACGATGAGAAG ACTAGGCTATCGCGGTCTTCGACGCCAGGCCCTTGTTCTCCACAGATTTTACCTTCTCGAGAAGAGGACCGTGGA GAAGGATCTTCTACCCCGAAACCGACTTCTTCAAAGCCTCAACTGTCTGACAAACCGGGTATGATGCCCGTACGA CATGACTTGAGCCCCGAGGCGATGGGGCGCGAGACGTGTCCTATCTGTATTGTCGATTTTGAGAAAGGCGACGAC ATACGAGTATTGCCCTGTGAAGGCAAACACCGATTTCATCCAGAATGTGTCGACCAATGGTTGCTCCAGTTGTCC AGTTCTTGCCCTATATGTCGTCAAGATTTCATGGCGCTTGCTGACATGATGTCATATGAAGACGACAGAGAAAGC CAAGAACTTGGTATTGATGGTTTTGAACCAGATTCACCGGACGAAGACAGGCGCTCATACCATCAATCTCTGAGC CCACAGCGGTCCGCCTCCTCACCTGGAAGTAGTCGATTCTCGCGGTACCTGCATTTCGCATCTGGCAGACGTAAT CGACGCCAGCAGAGAGAACAAGGCGCCCCAGTGCAGGAGGAATTAGTGCAAGAACAGAGTCGATAG
Transcript	>Agabi119p4|046260 ATGGTACTCCTTCTCCTCCTCCTTGCCGCACTCGCCGCCGCCTATATCCCAGCCTCTCCCACAAATTCTACCCAG GACGCCATTGCTGGTGGACTCAACATCACCGACATATCCAAACTTCGCCTCCAGTGGTATTCAAACGGTAATTAC GTTGAAAACATCTCTTATCAACTCGCTGGCAATGGTACTAGTGGTATCAGTAAGGGCATTTTGATTCATTTTTCC GAAGAGTCCGTCAATGAAACGATCCCACCGACGTCTGCACCCTGGATTGCAATGGTCTCTTGCGATGCCAACGCC ACCGATGCATCAATGGATGTCGATATCTTCACCCTGGCACGCGACAAGGGTGCAGTCGCAGCTTTGTTGTATTCT CTGCGTTCGCTCGCTTGTGTAATTAATCCAGAATATGCGAACCCGGCAACTTTCGATCAGGTCTTCGATATTTTT TCGACCCAAAGCAAAACCAGCGCCCGCCTCATTGATTATCAGTTCGGTCAGCTGGCACCGGCGAACAGCAGCATC ACCAAATATGATTCACAGCGCCTCAATAACACGGCGGAGGCTGTTAGAGACTCCATTCAGGCCGGTCATGCCACG CGGCCAGGGTTTCTGTACGCGGAATTGCGAGCATACAATGCTACCGGAGATACGAACGATCCTGTCGTCACTGGT TCGAATAGTGGGGACTCGACTGGGAGTGGCACTGGTTCCAAAAATACTGCGCTTGCAATGATAGTTCTCTATGCG ATCACCGGGTGTGTCTCCGCCCTTTTTTGCATTGTGATCATTTCAGGAGCCGTTCGTGCACTACGTCATCCTGAA CGTTACGGACCCCGGGCCAGAATCGGCTTAGATGGTCCACCACAGGGTCGCGCCAGGGGTCTCACTCGTGCCATA CTTGACACGTTTCCTATTGTCAAGTTTGGAGGGAGCCGTGACAGACCAGTTGATTCCGCCATGGATACGGCAAAT TCTATTAAGGATATGGAGGCTCAGGACATCAGCCAGTGGGAGCTTCTGGACATTACGGACGCTAAGAGGGAGAGC ACATTTAAACTCGATGAGGTCAATGCAACTGTGGGTTGTACGGCCAGTCAGGCCATTGAAATGGACGATGAGAAG ACTAGGCTATCGCGGTCTTCGACGCCAGGCCCTTGTTCTCCACAGATTTTACCTTCTCGAGAAGAGGACCGTGGA GAAGGATCTTCTACCCCGAAACCGACTTCTTCAAAGCCTCAACTGTCTGACAAACCGGGTATGATGCCCGTACGA CATGACTTGAGCCCCGAGGCGATGGGGCGCGAGACGTGTCCTATCTGTATTGTCGATTTTGAGAAAGGCGACGAC ATACGAGTATTGCCCTGTGAAGGCAAACACCGATTTCATCCAGAATGTGTCGACCAATGGTTGCTCCAGTTGTCC AGTTCTTGCCCTATATGTCGTCAAGATTTCATGGCGCTTGCTGACATGATGTCATATGAAGACGACAGAGAAAGC CAAGAACTTGGTATTGATGGTTTTGAACCAGATTCACCGGACGAAGACAGGCGCTCATACCATCAATCTCTGAGC CCACAGCGGTCCGCCTCCTCACCTGGAAGTAGTCGATTCTCGCGGTACCTGCATTTCGCATCTGGCAGACGTAAT CGACGCCAGCAGAGAGAACAAGGCGCCCCAGTGCAGGAGGAATTAGTGCAAGAACAGAGTCGATAG
Gene	>Agabi119p4|046260 ATGGTACTCCTTCTCCTCCTCCTTGCCGCACTCGCCGCCGCCTATATCCCAGCCTCTCCCACAAATTCTACCCAG GACGCCATTGCTGGTGGACTCAACATCACCGACATATCCAAACTTCGCCTCCAGTGGTATTCAAACGGGTCCGTG CCCACCCCCTTTCTCCAGCAGAGACTTCTCACAGTGTTGCAGTAATTACGTTGAAAACATCTCTTATCAACTCGC TGGCAATGGTACTAGTGGTATCAGTAAGGTACACCGCGGCTCCCATCTCCTTTGTCTCGCTTTCCTCATTTCCCC GTCTTTCCAAAGGGCATTTTGATTCATTTTTCCGAAGAGTCCGTCAATGAAACGATCCCACCGAGTGCGCCTTCC GAAAAACCCTCGTAGTGCCAATGTTGATCAGAAGATTTAGCGTCTGCACCCTGGATTGCAATGGTCTCTTGCGAT GCCAACGCCACCGATGCATCAATGGATGTCGATATCTTCACCCTGGCACGCGACAAGGGTGCAGTCGCAGCTGTA TGTTTATCTCGGCTTAGCCGACATATCTTTTACTCACGACATGTCGTCACCCATTTAGTTGTTGTATTCTCTGCG TTCGCTCGCTTGTGTAATTAATCCAGAATATGCGAACCCGGCAACTTTCGATCAGGTCTTCGATATTTTTTCGAC CCAAAGCAAAACCAGCGCCCGCCTCATTGATTATCAGTTCGGTCAGCTGGCACCGGCGAACAGCAGCATCACCAA ATATGATTCACAGCGCCTCAATAACACGGCGGAGGCTGTTAGAGACTCCATTCAGGCCGGTCATGCCACGCGGCC AGGGTTTCTGTACGCGGAATTGCGAGCATACAATGCTACCGGAGATACGAACGATCCTGTCGTCACTGGTTCGAA TAGTGGGGACTCGACTGGGAGTGGCACTGGTTCCAAAAATACTGCGCTTGCAATGTGAGTTTCAGTCGTCGATGC AAACCTCAGCCAACTGATGAACTATGTATGGCTTTTTGATCCCTATCAGGATAGTTCTCTATGCGATCACCGGGT GTGTCTCCGCCCTTTTTTGCATTGTGATCATTTCAGGAGTACGTTCTGTTTTTCTCCATGCAACCCATCATCATT AACTTCGTTCTCCTTAATGATCAGGCCGTTCGTGCACTACGTCATCCTGAACGTTACGGACCCCGGGCCAGAATC GGCTTAGATGGTCCACCACAGGGTCGCGCCAGGGGTCTCACTCGTGCCATACTTGACACGTTTCCTATTGTCAAG TTTGGAGGGAGCCGTGACAGACCAGTTGATTCCGCCATGGATACGGCAAATTCTATTAAGGATATGGAGGCTCAG GACATCAGCCAGTGGGAGCTTCTGGACATTACGGACGCTAAGAGGGAGAGCACATTTAAACTCGATGAGGTCAAT GCAACTGTGGGTTGTACGGCCAGTCAGGCCATTGAAATGGACGATGAGAAGACTAGGCTATCGCGGTCTTCGACG CCAGGCCCTTGTTCTCCACAGATTTTACCTTCTCGAGAAGAGGACCGTGGAGAAGGATCTTCTACCCCGAAACCG ACTTCTTCAAAGCCTCAACTGTCTGACAAACCGGGTATGATGCCCGTACGACATGACTTGAGCCCCGAGGCGATG GGGCGCGAGACGTGTCCTATCTGTATTGTCGATTTTGAGAAAGGCGACGACATACGAGTATTGCCCTGTGAAGGC AAACACCGATTTCATCCAGAATGTGTCGACCAATGGTTGCTCCAGTTGTCCAGTTCTTGCCCTATATGTCGTCAA GGTGTGTTAATCAGTTGCAACACATCGTTCTCTTTGCCATCTACTGATGCAATCTTATGACAGATTTCATGGCGC TTGCTGACATGATGTCATATGAAGACGACAGAGAAAGCCAAGAACTTGGTATTGATGGTTTTGAACCAGATTCAC CGGACGAAGACAGGCGCTCATACCATCAATCTCTGAGCCCACAGCGGTCCGCCTCCTCACCTGGAAGTAGTCGAT TCTCGCGGTACCTGCATTTCGCATCTGGCAGACGTAATCGACGCCAGCAGAGAGAACAAGGCGCCCCAGTGCAGG AGGAATTAGTGCAAGAACAGAGTCGATAG