Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|044570
Gene name
Locationscaffold_02:1381694..1383482
Strand+
Gene length (bp)1788
Transcript length (bp)1638
Coding sequence length (bp)1638
Protein length (aa) 546

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08630 Dfp1_Him1_M Dfp1/Him1, central region 1.7E-34 156 281
PF07535 zf-DBF DBF zinc finger 3.4E-19 464 506

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O59836|HIM1_SCHPO Hsk1-interacting molecule 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=him1 PE=1 SV=1 57 281 2.0E-14
sp|O59836|HIM1_SCHPO Hsk1-interacting molecule 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=him1 PE=1 SV=1 463 509 3.0E-10
sp|P32325|DBF4_YEAST DDK kinase regulatory subunit DBF4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DBF4 PE=1 SV=2 154 290 1.0E-07

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0043169 cation binding No
GO:0043167 ion binding No
GO:0046872 metal ion binding No
GO:0005488 binding No
GO:0046914 transition metal ion binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|044570
MNRRPLAPRQLLLQQPPLPQKRPRSPDPAALPLKKHRRDRDPLRDNHRLEREQQRLEFKEKYCRAFPGWIFYLDS
DTIDRPHQLESFRSRIQQLGARIDPFFSRETTHLISNRPNPPGSVDPSEKENAPKTRILSRIKSPLKNRSRQPED
ADATELIANALKFKIKIWDTAKLDSVLSRCLEEPSTIIPTQTSSTKQRNPHTLSKLLQSERLHGSSERDPTQKRH
DFHYFGRGSHFVLIEDMYGELATIAAHEYPAPKKADDDKTPWPTLYCHPQARGPFVRFDEREKRRWERLQQAEKK
EKEERRLRRETLLKKLPLDNEMHMRPLARKAGDLRRSVSLNNMANIDPFAYHDGDGDVIESANASGYLASGLMGY
TAASGNSVNITSTTGTTSTSNFASRALQIPCNLTSRMRMEVVMRKQPQEKLAQTNPMGPPADVPQRSMVLKKSKS
TNTLKLPKREEGSKPGYCESCRQKFDDFKEHIRGRKHRKFAADDSNFLSLDYIIHRVQRRTLKETQALHQGRMDI
CSQISNQDFDSDFDPIPVED*
Coding >Agabi119p4|044570
ATGAACCGTCGCCCGCTCGCCCCCCGCCAGCTCCTCCTCCAGCAGCCCCCGCTACCCCAGAAGCGCCCCAGGTCT
CCAGATCCCGCCGCTCTCCCACTCAAGAAGCACAGGCGCGACCGCGATCCCCTCAGGGACAACCACCGCCTCGAG
CGGGAACAGCAGCGTCTCGAGTTCAAGGAAAAGTACTGCCGCGCCTTTCCTGGCTGGATCTTTTACCTCGACAGC
GACACCATCGACCGCCCCCACCAGCTCGAGTCGTTTCGCTCGCGCATCCAGCAGCTTGGCGCGAGGATAGATCCT
TTCTTCTCGCGCGAGACTACGCACCTTATCTCCAACCGCCCCAACCCTCCAGGCTCAGTCGACCCGTCAGAGAAG
GAAAATGCCCCCAAAACGAGAATATTATCAAGAATTAAAAGCCCCCTCAAGAATCGTTCGCGCCAGCCTGAAGAC
GCAGATGCAACCGAACTCATAGCCAATGCCCTCAAATTCAAGATCAAGATCTGGGATACCGCCAAACTCGACAGC
GTACTTTCGCGTTGCCTCGAAGAGCCTTCTACCATAATTCCGACTCAGACCTCATCCACAAAGCAACGCAACCCC
CACACCCTCTCTAAACTCCTTCAATCCGAACGTCTCCATGGATCCAGTGAACGTGACCCAACACAGAAGAGGCAC
GATTTTCATTATTTTGGCCGTGGCAGTCACTTTGTTCTGATTGAGGACATGTATGGCGAACTCGCCACCATCGCC
GCTCATGAGTATCCTGCCCCTAAAAAGGCTGATGACGACAAAACCCCTTGGCCAACATTATACTGTCATCCGCAA
GCACGCGGGCCTTTTGTACGTTTTGACGAGCGGGAGAAACGCAGATGGGAGCGATTACAACAGGCCGAGAAAAAG
GAGAAAGAAGAAAGGCGACTACGTCGCGAAACACTTCTAAAAAAGCTACCATTGGATAATGAAATGCATATGCGT
CCCCTCGCACGCAAAGCTGGTGACTTGCGTCGCTCCGTTTCCTTGAATAATATGGCCAATATTGATCCCTTTGCT
TATCACGATGGTGACGGAGACGTGATTGAATCCGCTAACGCGTCGGGATATCTTGCTTCAGGCTTGATGGGATAT
ACAGCCGCCTCTGGCAACAGCGTCAACATTACCTCCACCACAGGAACTACATCCACTTCCAACTTTGCTTCGCGT
GCTCTCCAGATACCTTGCAACCTCACTAGTCGAATGCGTATGGAAGTTGTCATGCGCAAACAACCTCAAGAAAAG
CTCGCTCAAACAAACCCCATGGGCCCTCCTGCGGATGTTCCTCAGCGTTCCATGGTTCTCAAGAAAAGCAAGAGC
ACGAATACACTCAAGCTTCCCAAGCGAGAAGAAGGGAGTAAGCCTGGTTATTGTGAGAGTTGTAGGCAAAAGTTT
GATGATTTCAAAGAGCATATCCGCGGCCGTAAGCACCGTAAATTTGCGGCGGATGACAGCAATTTTCTCTCGCTT
GACTACATTATACATCGAGTTCAACGGCGCACTCTCAAAGAAACCCAGGCTTTGCATCAGGGGCGCATGGATATT
TGCAGCCAGATATCCAACCAGGATTTTGATTCTGATTTCGACCCTATACCCGTCGAGGATTAG
Transcript >Agabi119p4|044570
ATGAACCGTCGCCCGCTCGCCCCCCGCCAGCTCCTCCTCCAGCAGCCCCCGCTACCCCAGAAGCGCCCCAGGTCT
CCAGATCCCGCCGCTCTCCCACTCAAGAAGCACAGGCGCGACCGCGATCCCCTCAGGGACAACCACCGCCTCGAG
CGGGAACAGCAGCGTCTCGAGTTCAAGGAAAAGTACTGCCGCGCCTTTCCTGGCTGGATCTTTTACCTCGACAGC
GACACCATCGACCGCCCCCACCAGCTCGAGTCGTTTCGCTCGCGCATCCAGCAGCTTGGCGCGAGGATAGATCCT
TTCTTCTCGCGCGAGACTACGCACCTTATCTCCAACCGCCCCAACCCTCCAGGCTCAGTCGACCCGTCAGAGAAG
GAAAATGCCCCCAAAACGAGAATATTATCAAGAATTAAAAGCCCCCTCAAGAATCGTTCGCGCCAGCCTGAAGAC
GCAGATGCAACCGAACTCATAGCCAATGCCCTCAAATTCAAGATCAAGATCTGGGATACCGCCAAACTCGACAGC
GTACTTTCGCGTTGCCTCGAAGAGCCTTCTACCATAATTCCGACTCAGACCTCATCCACAAAGCAACGCAACCCC
CACACCCTCTCTAAACTCCTTCAATCCGAACGTCTCCATGGATCCAGTGAACGTGACCCAACACAGAAGAGGCAC
GATTTTCATTATTTTGGCCGTGGCAGTCACTTTGTTCTGATTGAGGACATGTATGGCGAACTCGCCACCATCGCC
GCTCATGAGTATCCTGCCCCTAAAAAGGCTGATGACGACAAAACCCCTTGGCCAACATTATACTGTCATCCGCAA
GCACGCGGGCCTTTTGTACGTTTTGACGAGCGGGAGAAACGCAGATGGGAGCGATTACAACAGGCCGAGAAAAAG
GAGAAAGAAGAAAGGCGACTACGTCGCGAAACACTTCTAAAAAAGCTACCATTGGATAATGAAATGCATATGCGT
CCCCTCGCACGCAAAGCTGGTGACTTGCGTCGCTCCGTTTCCTTGAATAATATGGCCAATATTGATCCCTTTGCT
TATCACGATGGTGACGGAGACGTGATTGAATCCGCTAACGCGTCGGGATATCTTGCTTCAGGCTTGATGGGATAT
ACAGCCGCCTCTGGCAACAGCGTCAACATTACCTCCACCACAGGAACTACATCCACTTCCAACTTTGCTTCGCGT
GCTCTCCAGATACCTTGCAACCTCACTAGTCGAATGCGTATGGAAGTTGTCATGCGCAAACAACCTCAAGAAAAG
CTCGCTCAAACAAACCCCATGGGCCCTCCTGCGGATGTTCCTCAGCGTTCCATGGTTCTCAAGAAAAGCAAGAGC
ACGAATACACTCAAGCTTCCCAAGCGAGAAGAAGGGAGTAAGCCTGGTTATTGTGAGAGTTGTAGGCAAAAGTTT
GATGATTTCAAAGAGCATATCCGCGGCCGTAAGCACCGTAAATTTGCGGCGGATGACAGCAATTTTCTCTCGCTT
GACTACATTATACATCGAGTTCAACGGCGCACTCTCAAAGAAACCCAGGCTTTGCATCAGGGGCGCATGGATATT
TGCAGCCAGATATCCAACCAGGATTTTGATTCTGATTTCGACCCTATACCCGTCGAGGATTAG
Gene >Agabi119p4|044570
ATGAACCGTCGCCCGCTCGCCCCCCGCCAGCTCCTCCTCCAGCAGCCCCCGCTACCCCAGAAGCGCCCCAGGTCT
CCAGATCCCGCCGCTCTCCCACTCAAGAAGCACAGGCGCGACCGCGATCCCCTCAGGGACAACCACCGCCTCGAG
CGGGAACAGCAGCGTCTCGAGTTCAAGGAAAAGTACTGCCGCGCCTTTCCTGGCTGGATCTTTTACCTCGACAGC
GACACCATCGACCGCCCCCACCAGCTCGAGTCGTTTCGCTCGCGCATCCAGCAGCTTGGCGCGGTGAGTCCACAG
TTCTCCTCTCCATGCCTCTTCTCATCCACACTCTAGAGGATAGATCCTTTCTTCTCGCGCGAGACTACGCACCTT
ATCTCCAACCGCCCCAACCCTCCAGGCTCAGTCGACCCGTCAGAGAAGGAAAATGCCCCCAAAACGAGAATATTA
TCAAGAATTAAAAGCCCCCTCAAGAATCGTTCGCGGTGAGTCGTGACGCCAAGTAGACCGAGTATGCCCTCCGAA
CAGGTTGTCCAGCCAGCCTGAAGACGCAGATGCAACCGAACTCATAGCCAATGCCCTCAAATTCAAGATCAAGAT
CTGGGATACCGCCAAACTCGACAGCGTACTTTCGCGTTGCCTCGAAGAGCCTTCTACCATAATTCCGACTCAGAC
CTCATCCACAAAGCAACGCAACCCCCACACCCTCTCTAAACTCCTTCAATCCGAACGTCTCCATGGATCCAGTGA
ACGTGACCCAACACAGAAGAGGCACGATTTTCATTATTTTGGCCGTGGCAGTCACTTTGTTCTGATTGAGGACAT
GTATGGCGAACTCGCCACCATCGCCGCTCATGAGTATCCTGCCCCTAAAAAGGCTGATGACGACAAAACCCCTTG
GCCAACATTATACTGTCATCCGCAAGCACGCGGGCCTTTTGTACGTTTTGACGAGCGGGAGAAACGCAGATGGGA
GCGATTACAACAGGCCGAGAAAAAGGAGAAAGAAGAAAGGCGACTACGTCGCGAAACACTTCTAAAAAAGCTACC
ATTGGATAATGAAATGCATATGCGTCCCCTCGCACGCAAAGCTGGTGACTTGCGTCGCTCCGTTTCCTTGAATAA
TATGGCCAATATTGATCCCTTTGCTTATCACGATGGTGACGGAGACGTGATTGAATCCGCTAACGCGTCGGGATA
TCTTGCTTCAGGCTTGATGGGATATACAGCCGCCTCTGGCAACAGCGTCAACATTACCTCCACCACAGGAACTAC
ATCCACTTCCAACTTTGCTTCGCGTGCTCTCCAGATACCTTGCAACCTCACTAGTCGAATGCGTATGGAAGTTGT
CATGCGCAAACAACCTCAAGAAAAGCTCGCTCAAACAAACCCCATGGGCCCTCCTGCGGATGTTCCTCAGCGTTC
CATGGTTCTCAAGAAAAGCAAGAGCACGAATACACTCAAGCTTCCCAAGCGAGAAGAAGGGAGTAAGCCTGGTTA
TTGTGAGAGTTGTAGGCAAAAGTTTGATGATTTCAAAGAGGTGAGTTTTCTCCTGCCTGATCTTTTTTTCTTTCT
CAAATCCAGTCTTAGCATATCCGCGGCCGTAAGCACCGTAAATTTGCGGCGGATGACAGCAATTTTCTCTCGCTT
GACTACATTATACATCGAGTTCAACGGCGCACTCTCAAAGAAACCCAGGCTTTGCATCAGGGGCGCATGGATATT
TGCAGCCAGATATCCAACCAGGATTTTGATTCTGATTTCGACCCTATACCCGTCGAGGATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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