Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|044570
Gene name
Locationscaffold_02:1381694..1383482
Strand+
Gene length (bp)1788
Transcript length (bp)1638
Coding sequence length (bp)1638
Protein length (aa) 546

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08630 Dfp1_Him1_M Dfp1/Him1, central region 1.7E-34 156 281
PF07535 zf-DBF DBF zinc finger 3.4E-19 464 506

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O59836|HIM1_SCHPO Hsk1-interacting molecule 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=him1 PE=1 SV=1 57 281 2.0E-14
sp|O59836|HIM1_SCHPO Hsk1-interacting molecule 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=him1 PE=1 SV=1 463 509 3.0E-10
sp|P32325|DBF4_YEAST DDK kinase regulatory subunit DBF4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DBF4 PE=1 SV=2 154 290 1.0E-07

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0043169 cation binding No
GO:0043167 ion binding No
GO:0046872 metal ion binding No
GO:0005488 binding No
GO:0046914 transition metal ion binding No
GO:0003674 molecular_function No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup3327
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|044570
Agaricus bisporus var bisporus H97 AgabiH97|044570
Agaricus bisporus var burnettii H119p4 Agabi119p4|044570 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|044570
MNRRPLAPRQLLLQQPPLPQKRPRSPDPAALPLKKHRRDRDPLRDNHRLEREQQRLEFKEKYCRAFPGWIFYLDS
DTIDRPHQLESFRSRIQQLGARIDPFFSRETTHLISNRPNPPGSVDPSEKENAPKTRILSRIKSPLKNRSRQPED
ADATELIANALKFKIKIWDTAKLDSVLSRCLEEPSTIIPTQTSSTKQRNPHTLSKLLQSERLHGSSERDPTQKRH
DFHYFGRGSHFVLIEDMYGELATIAAHEYPAPKKADDDKTPWPTLYCHPQARGPFVRFDEREKRRWERLQQAEKK
EKEERRLRRETLLKKLPLDNEMHMRPLARKAGDLRRSVSLNNMANIDPFAYHDGDGDVIESANASGYLASGLMGY
TAASGNSVNITSTTGTTSTSNFASRALQIPCNLTSRMRMEVVMRKQPQEKLAQTNPMGPPADVPQRSMVLKKSKS
TNTLKLPKREEGSKPGYCESCRQKFDDFKEHIRGRKHRKFAADDSNFLSLDYIIHRVQRRTLKETQALHQGRMDI
CSQISNQDFDSDFDPIPVED*
Coding >Agabi119p4|044570
ATGAACCGTCGCCCGCTCGCCCCCCGCCAGCTCCTCCTCCAGCAGCCCCCGCTACCCCAGAAGCGCCCCAGGTCT
CCAGATCCCGCCGCTCTCCCACTCAAGAAGCACAGGCGCGACCGCGATCCCCTCAGGGACAACCACCGCCTCGAG
CGGGAACAGCAGCGTCTCGAGTTCAAGGAAAAGTACTGCCGCGCCTTTCCTGGCTGGATCTTTTACCTCGACAGC
GACACCATCGACCGCCCCCACCAGCTCGAGTCGTTTCGCTCGCGCATCCAGCAGCTTGGCGCGAGGATAGATCCT
TTCTTCTCGCGCGAGACTACGCACCTTATCTCCAACCGCCCCAACCCTCCAGGCTCAGTCGACCCGTCAGAGAAG
GAAAATGCCCCCAAAACGAGAATATTATCAAGAATTAAAAGCCCCCTCAAGAATCGTTCGCGCCAGCCTGAAGAC
GCAGATGCAACCGAACTCATAGCCAATGCCCTCAAATTCAAGATCAAGATCTGGGATACCGCCAAACTCGACAGC
GTACTTTCGCGTTGCCTCGAAGAGCCTTCTACCATAATTCCGACTCAGACCTCATCCACAAAGCAACGCAACCCC
CACACCCTCTCTAAACTCCTTCAATCCGAACGTCTCCATGGATCCAGTGAACGTGACCCAACACAGAAGAGGCAC
GATTTTCATTATTTTGGCCGTGGCAGTCACTTTGTTCTGATTGAGGACATGTATGGCGAACTCGCCACCATCGCC
GCTCATGAGTATCCTGCCCCTAAAAAGGCTGATGACGACAAAACCCCTTGGCCAACATTATACTGTCATCCGCAA
GCACGCGGGCCTTTTGTACGTTTTGACGAGCGGGAGAAACGCAGATGGGAGCGATTACAACAGGCCGAGAAAAAG
GAGAAAGAAGAAAGGCGACTACGTCGCGAAACACTTCTAAAAAAGCTACCATTGGATAATGAAATGCATATGCGT
CCCCTCGCACGCAAAGCTGGTGACTTGCGTCGCTCCGTTTCCTTGAATAATATGGCCAATATTGATCCCTTTGCT
TATCACGATGGTGACGGAGACGTGATTGAATCCGCTAACGCGTCGGGATATCTTGCTTCAGGCTTGATGGGATAT
ACAGCCGCCTCTGGCAACAGCGTCAACATTACCTCCACCACAGGAACTACATCCACTTCCAACTTTGCTTCGCGT
GCTCTCCAGATACCTTGCAACCTCACTAGTCGAATGCGTATGGAAGTTGTCATGCGCAAACAACCTCAAGAAAAG
CTCGCTCAAACAAACCCCATGGGCCCTCCTGCGGATGTTCCTCAGCGTTCCATGGTTCTCAAGAAAAGCAAGAGC
ACGAATACACTCAAGCTTCCCAAGCGAGAAGAAGGGAGTAAGCCTGGTTATTGTGAGAGTTGTAGGCAAAAGTTT
GATGATTTCAAAGAGCATATCCGCGGCCGTAAGCACCGTAAATTTGCGGCGGATGACAGCAATTTTCTCTCGCTT
GACTACATTATACATCGAGTTCAACGGCGCACTCTCAAAGAAACCCAGGCTTTGCATCAGGGGCGCATGGATATT
TGCAGCCAGATATCCAACCAGGATTTTGATTCTGATTTCGACCCTATACCCGTCGAGGATTAG
Transcript >Agabi119p4|044570
ATGAACCGTCGCCCGCTCGCCCCCCGCCAGCTCCTCCTCCAGCAGCCCCCGCTACCCCAGAAGCGCCCCAGGTCT
CCAGATCCCGCCGCTCTCCCACTCAAGAAGCACAGGCGCGACCGCGATCCCCTCAGGGACAACCACCGCCTCGAG
CGGGAACAGCAGCGTCTCGAGTTCAAGGAAAAGTACTGCCGCGCCTTTCCTGGCTGGATCTTTTACCTCGACAGC
GACACCATCGACCGCCCCCACCAGCTCGAGTCGTTTCGCTCGCGCATCCAGCAGCTTGGCGCGAGGATAGATCCT
TTCTTCTCGCGCGAGACTACGCACCTTATCTCCAACCGCCCCAACCCTCCAGGCTCAGTCGACCCGTCAGAGAAG
GAAAATGCCCCCAAAACGAGAATATTATCAAGAATTAAAAGCCCCCTCAAGAATCGTTCGCGCCAGCCTGAAGAC
GCAGATGCAACCGAACTCATAGCCAATGCCCTCAAATTCAAGATCAAGATCTGGGATACCGCCAAACTCGACAGC
GTACTTTCGCGTTGCCTCGAAGAGCCTTCTACCATAATTCCGACTCAGACCTCATCCACAAAGCAACGCAACCCC
CACACCCTCTCTAAACTCCTTCAATCCGAACGTCTCCATGGATCCAGTGAACGTGACCCAACACAGAAGAGGCAC
GATTTTCATTATTTTGGCCGTGGCAGTCACTTTGTTCTGATTGAGGACATGTATGGCGAACTCGCCACCATCGCC
GCTCATGAGTATCCTGCCCCTAAAAAGGCTGATGACGACAAAACCCCTTGGCCAACATTATACTGTCATCCGCAA
GCACGCGGGCCTTTTGTACGTTTTGACGAGCGGGAGAAACGCAGATGGGAGCGATTACAACAGGCCGAGAAAAAG
GAGAAAGAAGAAAGGCGACTACGTCGCGAAACACTTCTAAAAAAGCTACCATTGGATAATGAAATGCATATGCGT
CCCCTCGCACGCAAAGCTGGTGACTTGCGTCGCTCCGTTTCCTTGAATAATATGGCCAATATTGATCCCTTTGCT
TATCACGATGGTGACGGAGACGTGATTGAATCCGCTAACGCGTCGGGATATCTTGCTTCAGGCTTGATGGGATAT
ACAGCCGCCTCTGGCAACAGCGTCAACATTACCTCCACCACAGGAACTACATCCACTTCCAACTTTGCTTCGCGT
GCTCTCCAGATACCTTGCAACCTCACTAGTCGAATGCGTATGGAAGTTGTCATGCGCAAACAACCTCAAGAAAAG
CTCGCTCAAACAAACCCCATGGGCCCTCCTGCGGATGTTCCTCAGCGTTCCATGGTTCTCAAGAAAAGCAAGAGC
ACGAATACACTCAAGCTTCCCAAGCGAGAAGAAGGGAGTAAGCCTGGTTATTGTGAGAGTTGTAGGCAAAAGTTT
GATGATTTCAAAGAGCATATCCGCGGCCGTAAGCACCGTAAATTTGCGGCGGATGACAGCAATTTTCTCTCGCTT
GACTACATTATACATCGAGTTCAACGGCGCACTCTCAAAGAAACCCAGGCTTTGCATCAGGGGCGCATGGATATT
TGCAGCCAGATATCCAACCAGGATTTTGATTCTGATTTCGACCCTATACCCGTCGAGGATTAG
Gene >Agabi119p4|044570
ATGAACCGTCGCCCGCTCGCCCCCCGCCAGCTCCTCCTCCAGCAGCCCCCGCTACCCCAGAAGCGCCCCAGGTCT
CCAGATCCCGCCGCTCTCCCACTCAAGAAGCACAGGCGCGACCGCGATCCCCTCAGGGACAACCACCGCCTCGAG
CGGGAACAGCAGCGTCTCGAGTTCAAGGAAAAGTACTGCCGCGCCTTTCCTGGCTGGATCTTTTACCTCGACAGC
GACACCATCGACCGCCCCCACCAGCTCGAGTCGTTTCGCTCGCGCATCCAGCAGCTTGGCGCGGTGAGTCCACAG
TTCTCCTCTCCATGCCTCTTCTCATCCACACTCTAGAGGATAGATCCTTTCTTCTCGCGCGAGACTACGCACCTT
ATCTCCAACCGCCCCAACCCTCCAGGCTCAGTCGACCCGTCAGAGAAGGAAAATGCCCCCAAAACGAGAATATTA
TCAAGAATTAAAAGCCCCCTCAAGAATCGTTCGCGGTGAGTCGTGACGCCAAGTAGACCGAGTATGCCCTCCGAA
CAGGTTGTCCAGCCAGCCTGAAGACGCAGATGCAACCGAACTCATAGCCAATGCCCTCAAATTCAAGATCAAGAT
CTGGGATACCGCCAAACTCGACAGCGTACTTTCGCGTTGCCTCGAAGAGCCTTCTACCATAATTCCGACTCAGAC
CTCATCCACAAAGCAACGCAACCCCCACACCCTCTCTAAACTCCTTCAATCCGAACGTCTCCATGGATCCAGTGA
ACGTGACCCAACACAGAAGAGGCACGATTTTCATTATTTTGGCCGTGGCAGTCACTTTGTTCTGATTGAGGACAT
GTATGGCGAACTCGCCACCATCGCCGCTCATGAGTATCCTGCCCCTAAAAAGGCTGATGACGACAAAACCCCTTG
GCCAACATTATACTGTCATCCGCAAGCACGCGGGCCTTTTGTACGTTTTGACGAGCGGGAGAAACGCAGATGGGA
GCGATTACAACAGGCCGAGAAAAAGGAGAAAGAAGAAAGGCGACTACGTCGCGAAACACTTCTAAAAAAGCTACC
ATTGGATAATGAAATGCATATGCGTCCCCTCGCACGCAAAGCTGGTGACTTGCGTCGCTCCGTTTCCTTGAATAA
TATGGCCAATATTGATCCCTTTGCTTATCACGATGGTGACGGAGACGTGATTGAATCCGCTAACGCGTCGGGATA
TCTTGCTTCAGGCTTGATGGGATATACAGCCGCCTCTGGCAACAGCGTCAACATTACCTCCACCACAGGAACTAC
ATCCACTTCCAACTTTGCTTCGCGTGCTCTCCAGATACCTTGCAACCTCACTAGTCGAATGCGTATGGAAGTTGT
CATGCGCAAACAACCTCAAGAAAAGCTCGCTCAAACAAACCCCATGGGCCCTCCTGCGGATGTTCCTCAGCGTTC
CATGGTTCTCAAGAAAAGCAAGAGCACGAATACACTCAAGCTTCCCAAGCGAGAAGAAGGGAGTAAGCCTGGTTA
TTGTGAGAGTTGTAGGCAAAAGTTTGATGATTTCAAAGAGGTGAGTTTTCTCCTGCCTGATCTTTTTTTCTTTCT
CAAATCCAGTCTTAGCATATCCGCGGCCGTAAGCACCGTAAATTTGCGGCGGATGACAGCAATTTTCTCTCGCTT
GACTACATTATACATCGAGTTCAACGGCGCACTCTCAAAGAAACCCAGGCTTTGCATCAGGGGCGCATGGATATT
TGCAGCCAGATATCCAACCAGGATTTTGATTCTGATTTCGACCCTATACCCGTCGAGGATTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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