© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|044180 |
| Gene name | |
| Location | scaffold_02:1279817..1281264 |
| Strand | - |
| Gene length (bp) | 1447 |
| Transcript length (bp) | 1284 |
| Coding sequence length (bp) | 1284 |
| Protein length (aa) | 428 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | 2.4E-03 | 306 | 344 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q552R1|DCAF7_DICDI | DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2 | 1 | 427 | 1.0E-70 |
| sp|P61963|DCAF7_MOUSE | DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=1 SV=1 | 9 | 427 | 8.0E-69 |
| sp|P61962|DCAF7_HUMAN | DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1 | 9 | 427 | 8.0E-69 |
| sp|O74763|YBE8_SCHPO | Uncharacterized WD repeat-containing protein C17D11.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC17D11.08 PE=1 SV=1 | 9 | 427 | 2.0E-63 |
| sp|Q38960|LWD2_ARATH | WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1 | 9 | 427 | 4.0E-62 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q552R1|DCAF7_DICDI | DDB1- and CUL4-associated factor 7 homolog OS=Dictyostelium discoideum GN=wdr68 PE=3 SV=2 | 1 | 427 | 1.0E-70 |
| sp|P61963|DCAF7_MOUSE | DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=1 SV=1 | 9 | 427 | 8.0E-69 |
| sp|P61962|DCAF7_HUMAN | DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1 SV=1 | 9 | 427 | 8.0E-69 |
| sp|O74763|YBE8_SCHPO | Uncharacterized WD repeat-containing protein C17D11.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC17D11.08 PE=1 SV=1 | 9 | 427 | 2.0E-63 |
| sp|Q38960|LWD2_ARATH | WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2 PE=2 SV=1 | 9 | 427 | 4.0E-62 |
| sp|Q9LPV9|LWD1_ARATH | WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=1 | 9 | 427 | 1.0E-60 |
| sp|Q9XGN1|TTG1_ARATH | Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana GN=TTG1 PE=1 SV=1 | 5 | 427 | 2.0E-60 |
| sp|Q12523|YP247_YEAST | WD repeat-containing protein YPL247C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL247C PE=1 SV=1 | 2 | 427 | 2.0E-52 |
| sp|O14021|PRW1_SCHPO | RbAp48-related WD40 repeat-containing protein prw1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=prw1 PE=1 SV=1 | 166 | 345 | 1.0E-12 |
| sp|Q54JS5|WDR24_DICDI | WD repeat-containing protein 24 homolog OS=Dictyostelium discoideum GN=wdr24 PE=3 SV=1 | 179 | 371 | 6.0E-09 |
| sp|Q4P553|HAT2_USTMA | Histone acetyltransferase type B subunit 2 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=HAT2 PE=3 SV=2 | 136 | 398 | 9.0E-09 |
| sp|Q4I7L0|HAT2_GIBZE | Histone acetyltransferase type B subunit 2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=HAT2 PE=3 SV=1 | 153 | 345 | 1.0E-08 |
| sp|Q9XF57|PEX7_ARATH | Peroxisome biogenesis protein 7 OS=Arabidopsis thaliana GN=PEX7 PE=1 SV=2 | 161 | 346 | 2.0E-08 |
| sp|P97865|PEX7_MOUSE | Peroxisomal targeting signal 2 receptor OS=Mus musculus GN=Pex7 PE=1 SV=1 | 81 | 386 | 6.0E-08 |
| sp|Q1JQD2|GRWD1_BOVIN | Glutamate-rich WD repeat-containing protein 1 OS=Bos taurus GN=GRWD1 PE=2 SV=1 | 170 | 345 | 8.0E-08 |
| sp|O94244|HAT2_SCHPO | Histone acetyltransferase type B subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mis16 PE=1 SV=1 | 170 | 345 | 8.0E-08 |
| sp|O22466|MSI1_SOLLC | WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum GN=MSI1 PE=2 SV=1 | 170 | 345 | 1.0E-07 |
| sp|Q5XI13|GRWD1_RAT | Glutamate-rich WD repeat-containing protein 1 OS=Rattus norvegicus GN=Grwd1 PE=2 SV=1 | 170 | 410 | 1.0E-07 |
| sp|P90916|LIN53_CAEEL | Probable histone-binding protein lin-53 OS=Caenorhabditis elegans GN=lin-53 PE=1 SV=2 | 13 | 345 | 2.0E-07 |
| sp|Q61Y48|LIN53_CAEBR | Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae GN=lin-53 PE=3 SV=2 | 13 | 345 | 2.0E-07 |
| sp|Q8R537|PEX7_CRIGR | Peroxisomal targeting signal 2 receptor OS=Cricetulus griseus GN=PEX7 PE=1 SV=1 | 81 | 386 | 2.0E-07 |
| sp|Q9BQ67|GRWD1_HUMAN | Glutamate-rich WD repeat-containing protein 1 OS=Homo sapiens GN=GRWD1 PE=1 SV=1 | 192 | 410 | 3.0E-07 |
| sp|Q54ED4|GRWD1_DICDI | Glutamate-rich WD repeat-containing protein 1 OS=Dictyostelium discoideum GN=grwd1 PE=3 SV=1 | 178 | 397 | 4.0E-07 |
| sp|Q810D6|GRWD1_MOUSE | Glutamate-rich WD repeat-containing protein 1 OS=Mus musculus GN=Grwd1 PE=1 SV=2 | 170 | 345 | 5.0E-07 |
| sp|Q10G81|MSI1_ORYSJ | Histone-binding protein MSI1 homolog OS=Oryza sativa subsp. japonica GN=MSI1 PE=2 SV=1 | 170 | 345 | 5.0E-07 |
| sp|Q8SRK1|HAT2_ENCCU | Histone acetyltransferase type B subunit 2 OS=Encephalitozoon cuniculi (strain GB-M1) GN=HAT2 PE=1 SV=1 | 170 | 358 | 5.0E-07 |
| sp|O00628|PEX7_HUMAN | Peroxisomal targeting signal 2 receptor OS=Homo sapiens GN=PEX7 PE=1 SV=1 | 175 | 345 | 9.0E-07 |
| sp|O22467|MSI1_ARATH | Histone-binding protein MSI1 OS=Arabidopsis thaliana GN=MSI1 PE=1 SV=1 | 170 | 345 | 1.0E-06 |
| sp|Q03897|WDR59_YEAST | Maintenance of telomere capping protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MTC5 PE=1 SV=1 | 177 | 363 | 1.0E-06 |
| sp|Q7S7N3|HAT2_NEUCR | Histone acetyltransferase type B subunit 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=hat-2 PE=3 SV=2 | 147 | 345 | 2.0E-06 |
| sp|Q8C0M0|WDR59_MOUSE | WD repeat-containing protein 59 OS=Mus musculus GN=Wdr59 PE=1 SV=2 | 192 | 344 | 2.0E-06 |
| sp|Q4WEI5|HAT2_ASPFU | Histone acetyltransferase type B subunit 2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=hat2 PE=3 SV=1 | 153 | 345 | 2.0E-06 |
| sp|Q5ZLG9|WDR59_CHICK | WD repeat-containing protein 59 OS=Gallus gallus GN=WDR59 PE=2 SV=1 | 192 | 344 | 5.0E-06 |
| sp|O22469|MSI3_ARATH | WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana GN=MSI3 PE=1 SV=2 | 170 | 345 | 6.0E-06 |
| sp|P0CS36|HAT2_CRYNJ | Histone acetyltransferase type B subunit 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=HAT2 PE=3 SV=1 | 126 | 345 | 9.0E-06 |
| sp|P0CS37|HAT2_CRYNB | Histone acetyltransferase type B subunit 2 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=HAT2 PE=3 SV=1 | 126 | 345 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| Orthofinder run ID | 5 |
| Orthogroup | 3294 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Agaricus bisporus var bisporus H39 | AgabiH39|044180 |
| Agaricus bisporus var bisporus H97 | AgabiH97|044180 |
| Agaricus bisporus var burnettii H119p4 | Agabi119p4|044180 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|044180 MSQMTTLHYEAPWPVHSLDWCKTPAPGQQARHKTAFRMGIASFIDDYQNYIAVIGLQDEHVLVEDDFTDYPDFVT LAETYHGYPATSLQWQPSSAASHTWSQKSSNTEFLATTADALRVWEYSNDGTADVSSYVGRQSNNPGNHSLKMKI ALSGQSKVQSQSTGAPLTNFSWNEKSPSLIVTSSIDTTCTVWNIDTSTAITQLIAHDREVYDVAWLPGSTDIFVS VGADGSLRAFDLRALDHSTILYETPAPKNLPPPSVSPSASARPPTSPLLRIAFNPLDSNYMSTFHMDGCDIQILD MRSPGHPVMELRGHIAPINAIGWGSAEQPLLATAADDCQVLLWDLMDHAQASAVSPRNPTSRINSPRPDSKKKII TDPVMCYTAPGQITNLAWSPPIQGMTLPNGLTTSTGEWVAICSGKNIKALKV* |
| Coding | >Agabi119p4|044180 ATGAGTCAGATGACAACTTTACACTACGAGGCGCCATGGCCCGTGCATAGTCTAGACTGGTGCAAAACTCCGGCT CCAGGCCAACAGGCGCGCCACAAAACTGCCTTTCGCATGGGTATCGCGTCTTTCATAGACGATTATCAAAACTAC ATCGCTGTCATCGGACTACAAGATGAGCATGTACTTGTCGAGGACGATTTTACGGATTATCCGGATTTTGTCACC CTTGCGGAGACGTACCATGGTTATCCAGCCACAAGTTTACAATGGCAACCTAGTTCTGCCGCGAGCCATACTTGG TCACAGAAATCAAGCAACACAGAATTTCTCGCAACAACCGCCGACGCGCTCCGCGTCTGGGAGTACAGCAATGAT GGAACAGCAGATGTATCAAGCTACGTCGGACGGCAGTCCAACAATCCCGGGAACCACAGTCTAAAGATGAAGATA GCTCTTTCTGGACAATCCAAAGTTCAGAGCCAGTCCACTGGCGCTCCCTTGACCAACTTCTCTTGGAATGAAAAA TCACCTAGCCTAATAGTCACTTCTTCAATTGACACAACATGCACTGTTTGGAATATCGATACGTCGACTGCAATC ACCCAACTTATTGCACATGATCGGGAGGTGTATGATGTTGCATGGCTTCCAGGATCAACCGATATATTCGTTTCG GTGGGCGCGGATGGTAGTCTTCGAGCCTTTGACCTTCGTGCTCTAGACCATTCAACTATCCTATATGAGACGCCT GCTCCGAAGAACCTACCACCGCCTTCTGTCTCTCCTTCTGCATCAGCCCGTCCCCCAACTTCTCCCCTCCTCAGA ATTGCGTTCAATCCTCTAGATTCAAATTATATGTCAACGTTCCATATGGATGGCTGTGACATTCAAATTCTCGAT ATGCGGAGTCCGGGTCATCCTGTGATGGAGTTGAGGGGGCATATTGCTCCAATAAATGCAATCGGCTGGGGCTCC GCAGAGCAACCTCTACTTGCCACGGCGGCGGACGATTGTCAAGTGCTTCTCTGGGATCTTATGGATCATGCTCAA GCTAGTGCAGTTTCACCGCGAAATCCAACATCACGTATCAACTCCCCTCGACCAGATAGCAAAAAGAAAATCATC ACGGATCCTGTGATGTGTTATACTGCTCCAGGTCAAATCACAAATCTGGCTTGGTCGCCACCTATTCAAGGGATG ACGCTTCCTAACGGTCTGACAACAAGTACGGGGGAATGGGTGGCAATTTGCTCCGGAAAAAATATTAAGGCACTC AAGGTGTAG |
| Transcript | >Agabi119p4|044180 ATGAGTCAGATGACAACTTTACACTACGAGGCGCCATGGCCCGTGCATAGTCTAGACTGGTGCAAAACTCCGGCT CCAGGCCAACAGGCGCGCCACAAAACTGCCTTTCGCATGGGTATCGCGTCTTTCATAGACGATTATCAAAACTAC ATCGCTGTCATCGGACTACAAGATGAGCATGTACTTGTCGAGGACGATTTTACGGATTATCCGGATTTTGTCACC CTTGCGGAGACGTACCATGGTTATCCAGCCACAAGTTTACAATGGCAACCTAGTTCTGCCGCGAGCCATACTTGG TCACAGAAATCAAGCAACACAGAATTTCTCGCAACAACCGCCGACGCGCTCCGCGTCTGGGAGTACAGCAATGAT GGAACAGCAGATGTATCAAGCTACGTCGGACGGCAGTCCAACAATCCCGGGAACCACAGTCTAAAGATGAAGATA GCTCTTTCTGGACAATCCAAAGTTCAGAGCCAGTCCACTGGCGCTCCCTTGACCAACTTCTCTTGGAATGAAAAA TCACCTAGCCTAATAGTCACTTCTTCAATTGACACAACATGCACTGTTTGGAATATCGATACGTCGACTGCAATC ACCCAACTTATTGCACATGATCGGGAGGTGTATGATGTTGCATGGCTTCCAGGATCAACCGATATATTCGTTTCG GTGGGCGCGGATGGTAGTCTTCGAGCCTTTGACCTTCGTGCTCTAGACCATTCAACTATCCTATATGAGACGCCT GCTCCGAAGAACCTACCACCGCCTTCTGTCTCTCCTTCTGCATCAGCCCGTCCCCCAACTTCTCCCCTCCTCAGA ATTGCGTTCAATCCTCTAGATTCAAATTATATGTCAACGTTCCATATGGATGGCTGTGACATTCAAATTCTCGAT ATGCGGAGTCCGGGTCATCCTGTGATGGAGTTGAGGGGGCATATTGCTCCAATAAATGCAATCGGCTGGGGCTCC GCAGAGCAACCTCTACTTGCCACGGCGGCGGACGATTGTCAAGTGCTTCTCTGGGATCTTATGGATCATGCTCAA GCTAGTGCAGTTTCACCGCGAAATCCAACATCACGTATCAACTCCCCTCGACCAGATAGCAAAAAGAAAATCATC ACGGATCCTGTGATGTGTTATACTGCTCCAGGTCAAATCACAAATCTGGCTTGGTCGCCACCTATTCAAGGGATG ACGCTTCCTAACGGTCTGACAACAAGTACGGGGGAATGGGTGGCAATTTGCTCCGGAAAAAATATTAAGGCACTC AAGGTGTAG |
| Gene | >Agabi119p4|044180 ATGAGTCAGATGACAACTTTACACTACGAGGCGCCATGTGAGCAATGCAACGAATTTATATCATTTCATTTTCTC GCTCATCAAACAATTGTAGGGCCCGTGCATAGTCTAGACTGGTGCAAAACTCCGGCTCCAGGCCAACAGGCGCGC CACAAAACTGCCTTTCGCATGGGTATCGCGTCTTTCATAGACGATTATCAAAACTACATCGCTGTCATCGGACTA CAAGATGAGCATGTACTTGTCGAGGACGATTTTACGGATTATCCGGATTTTGTCACCCTTGCGGAGACGTACCAT GGTTATCCAGCCACAAGTTTACAATGGCAACCTAGTTCTGCCGCGAGCCATACTTGGTCACAGAAATCAAGCAAC ACAGAATTTCTCGCAACAACCGCCGACGCGCTCCGCGTCTGGGAGTACAGCAATGATGGAACAGCAGATGTATCA AGCTACGTCGGACGGCAGTCCAACAATCCCGGGAACCACAGTCTAAAGATGAAGATAGCTCTTTCTGGAGTACGT ATACTCAGATGAACTTAAATTTAACACTATCATGTTCATTACATCGACAGCAATCCAAAGTTCAGAGCCAGTCCA CTGGCGCTCCCTTGACCAACTTCTCTTGGAATGAAAAATCACCTAGCCTAATAGTCACTTCTTCAATTGACACAA CATGCACTGTTTGGAATATCGATACGTCGACTGCAATCACCCAACTTATTGCACATGATCGGGAGGTGTATGATG TTGCATGGCTTCCAGGATCAACCGATATATTCGTTTCGGTGGGCGCGGATGGTAGTCTTCGAGCCTTTGACCTTC GTGCTCTAGACCATTCAACTATCCTATATGAGACGCCTGCTCCGAAGAACCTACCACCGCCTTCTGTCTCTCCTT CTGCATCAGCCCGTCCCCCAACTTCTCCCCTCCTCAGAATTGCGTTCAATCCTCTAGATTCAAATTATATGTCAA CGTTCCATATGGATGGCTGTGACATTCAAATTCTCGATATGCGGAGTCCGGGTCATCCTGTGATGGAGTTGAGGG GGCATATTGCTCCAATAAATGCAATCGGCTGGGGCTCCGCAGAGCAACCTCTACTTGCCACGGCGGGTGAGTTAT TTATTGTGTGTTTGTTTGTCGGGTTTGAATAATATGAGCAGCGGACGATTGTCAAGTGCTTCTCTGGGATCTTAT GGATCATGCTCAAGCTAGTGCAGTTTCACCGCGAAATCCAACATCACGTATCAACTCCCCTCGACCAGATAGCAA AAAGAAAATCATCACGGATCCTGTGATGTGTTATACTGCTCCAGGTCAAATCACAAATCTGGCTTGGTCGCCACC TATTCAAGGGATGACGCTTCCTAACGGTCTGACAACAAGTACGGGGGAATGGGTGGCAATTTGCTCCGGAAAAAA TATTAAGGCACTCAAGGTGTAG |