Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|043620
Gene name
Locationscaffold_02:1158686..1160187
Strand-
Gene length (bp)1501
Transcript length (bp)1383
Coding sequence length (bp)1383
Protein length (aa) 461

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07647 SAM_2 SAM domain (Sterile alpha motif) 8.6E-05 328 384

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q4P965|VTS1_USTMA Protein VTS1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=VTS1 PE=3 SV=1 25 102 1.0E-20
sp|Q6CHK0|VTS1_YARLI Protein VTS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=VTS1 PE=3 SV=1 324 385 3.0E-20
sp|Q6BSL1|VTS1_DEBHA Protein VTS1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=VTS1 PE=3 SV=2 324 386 3.0E-18
sp|Q4P965|VTS1_USTMA Protein VTS1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=VTS1 PE=3 SV=1 324 390 5.0E-18
sp|Q4WJS2|VTS1_ASPFU Protein vts1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=vts1 PE=3 SV=2 29 98 5.0E-18
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Swissprot ID Swissprot Description Start End E-value
sp|Q4P965|VTS1_USTMA Protein VTS1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=VTS1 PE=3 SV=1 25 102 1.0E-20
sp|Q6CHK0|VTS1_YARLI Protein VTS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=VTS1 PE=3 SV=1 324 385 3.0E-20
sp|Q6BSL1|VTS1_DEBHA Protein VTS1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=VTS1 PE=3 SV=2 324 386 3.0E-18
sp|Q4P965|VTS1_USTMA Protein VTS1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=VTS1 PE=3 SV=1 324 390 5.0E-18
sp|Q4WJS2|VTS1_ASPFU Protein vts1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=vts1 PE=3 SV=2 29 98 5.0E-18
sp|Q4IBN1|VTS1_GIBZE Protein VTS1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=VTS1 PE=3 SV=1 29 98 6.0E-18
sp|Q5BGC4|VTS1_EMENI Protein vts1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=vts1 PE=3 SV=1 29 98 6.0E-18
sp|Q5AI80|VTS1_CANAL Protein VTS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=VTS1 PE=3 SV=1 326 390 2.0E-17
sp|Q7RZQ3|VTS1_NEUCR Protein VTS1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vts1 PE=3 SV=3 29 98 2.0E-17
sp|Q758Y4|VTS1_ASHGO Protein VTS1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=VTS1 PE=3 SV=2 324 386 3.0E-17
sp|Q4IBN1|VTS1_GIBZE Protein VTS1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=VTS1 PE=3 SV=1 324 385 5.0E-17
sp|Q08831|VTS1_YEAST Protein VTS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VTS1 PE=1 SV=1 324 384 7.0E-17
sp|Q7RZQ3|VTS1_NEUCR Protein VTS1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vts1 PE=3 SV=3 324 386 2.0E-16
sp|Q4WJS2|VTS1_ASPFU Protein vts1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=vts1 PE=3 SV=2 324 385 2.0E-16
sp|Q6CY29|VTS1_KLULA Protein VTS1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=VTS1 PE=3 SV=1 324 386 2.0E-15
sp|Q6FM94|VTS1_CANGA Protein VTS1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=VTS1 PE=3 SV=1 324 385 2.0E-15
sp|Q5BGC4|VTS1_EMENI Protein vts1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=vts1 PE=3 SV=1 324 397 3.0E-15
sp|Q9P6R7|VTS1_SCHPO Protein vts1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC13E7.03c PE=1 SV=1 326 384 2.0E-11
sp|B4QMP1|SMG_DROSI Protein Smaug OS=Drosophila simulans GN=smg PE=3 SV=1 291 453 1.0E-07
sp|B4HKJ7|SMG_DROSE Protein Smaug OS=Drosophila sechellia GN=smg PE=3 SV=1 291 453 2.0E-07
sp|P60320|SMG_DROYA Protein Smaug OS=Drosophila yakuba GN=smg PE=2 SV=2 319 453 2.0E-07
sp|B3NFQ7|SMG_DROER Protein Smaug OS=Drosophila erecta GN=smg PE=3 SV=1 291 453 4.0E-07
sp|Q23972|SMG_DROME Protein Smaug OS=Drosophila melanogaster GN=smg PE=1 SV=2 319 453 4.0E-07
sp|Q5PRF9|SMAG2_HUMAN Protein Smaug homolog 2 OS=Homo sapiens GN=SAMD4B PE=1 SV=1 328 395 3.0E-06
sp|Q80XS6|SMAG2_MOUSE Protein Smaug homolog 2 OS=Mus musculus GN=Samd4b PE=2 SV=1 300 395 3.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|043620
MSSPVAATCNTSIPAPTPATGIMFEGLDHWLKDFQSFESILVEMANASADGKFKNKLTTTEQWFEVLSEPERTAL
VYVLLQHSTQEQVHFFLAVLQQMRCEDDHSSKPRSIKAGVRSPSLDTPIHDSGTQAPDSTSKTWDSAVQGRLPNL
SKSTKALVSPSPRPYDALHTPPQEKKCASMLNTPAVPMFQESDSGNVRSNELGLPAINACTLNLLAASGLSNDAQ
LLAVQLVMSGILQPADTPSMVPKREQATHSRPIRKGRKPSHGDSRSPSSSKYPGSVLRSGARSGIPKSSGLKNNS
KNSGLASSSLDSTPNEPPRLEDFDPELLNDISLWLRSLRLHKYTSCFEGMVWQEMVTMDDAALEKKGVSALGARR
RLLRTFDCVRRKMGVESSTDSAAPTTSVVPSSAVSSSMDGVVQDDFSVLQSAAPRPSADSLVFVPTSKVSRGAAS
TLQLVVTSTV*
Coding >Agabi119p4|043620
ATGTCAAGCCCGGTTGCTGCCACTTGTAACACTAGTATTCCCGCTCCCACTCCGGCTACTGGGATAATGTTTGAG
GGTCTTGATCACTGGTTGAAGGACTTTCAAAGTTTCGAGTCTATCCTCGTAGAAATGGCGAATGCCTCGGCTGAT
GGCAAGTTCAAGAATAAATTGACTACGACAGAGCAATGGTTCGAGGTTCTCTCTGAGCCGGAACGCACAGCGTTG
GTGTATGTTCTCCTTCAACATTCCACGCAAGAACAAGTGCATTTTTTCTTAGCTGTCCTGCAGCAGATGAGATGC
GAGGATGACCACTCCTCAAAACCCCGATCCATAAAGGCTGGTGTTCGTTCTCCCAGTCTTGACACCCCCATACAT
GATTCTGGAACCCAAGCACCTGATTCTACGTCCAAAACTTGGGATTCGGCTGTCCAAGGTCGACTCCCTAACTTG
TCAAAGTCCACTAAAGCTCTTGTATCGCCGTCGCCTCGCCCCTATGATGCCTTGCACACACCGCCACAAGAAAAG
AAATGTGCAAGCATGCTAAACACTCCCGCCGTTCCAATGTTCCAAGAATCAGATTCTGGTAATGTTAGAAGTAAT
GAATTAGGTCTTCCTGCCATCAACGCATGCACGCTCAATCTCCTCGCAGCATCGGGTTTATCCAATGATGCACAA
TTACTGGCTGTCCAGCTGGTAATGAGCGGGATCCTGCAGCCCGCAGATACACCGTCTATGGTCCCAAAACGAGAA
CAGGCGACTCACTCCAGACCCATTAGAAAAGGTAGAAAACCGTCTCATGGGGATTCCAGGTCGCCTTCCAGTAGT
AAATATCCTGGCAGCGTCCTGCGAAGCGGGGCCCGGAGTGGTATACCGAAGAGTAGTGGTTTGAAGAACAATTCA
AAGAATTCTGGACTGGCAAGCAGTAGCCTTGATAGTACCCCCAACGAACCTCCGAGACTAGAAGACTTCGATCCT
GAACTGCTGAACGACATTTCTTTATGGCTGAGGAGCCTGAGATTGCACAAGTATACTTCTTGTTTCGAGGGCATG
GTATGGCAGGAGATGGTTACCATGGATGACGCTGCCTTGGAGAAAAAGGGCGTTTCTGCACTGGGTGCTAGGAGA
CGTTTGCTCAGAACATTTGATTGCGTCCGTCGCAAAATGGGGGTGGAGTCAAGTACCGATAGTGCTGCGCCTACA
ACTTCTGTCGTTCCCTCGAGCGCCGTTTCTTCCTCGATGGATGGTGTTGTTCAGGATGATTTCAGCGTACTCCAG
AGCGCGGCGCCGAGACCGTCCGCAGATTCCCTAGTTTTTGTGCCGACAAGTAAGGTGTCACGGGGCGCTGCATCT
ACTTTGCAACTCGTTGTTACCTCCACTGTCTGA
Transcript >Agabi119p4|043620
ATGTCAAGCCCGGTTGCTGCCACTTGTAACACTAGTATTCCCGCTCCCACTCCGGCTACTGGGATAATGTTTGAG
GGTCTTGATCACTGGTTGAAGGACTTTCAAAGTTTCGAGTCTATCCTCGTAGAAATGGCGAATGCCTCGGCTGAT
GGCAAGTTCAAGAATAAATTGACTACGACAGAGCAATGGTTCGAGGTTCTCTCTGAGCCGGAACGCACAGCGTTG
GTGTATGTTCTCCTTCAACATTCCACGCAAGAACAAGTGCATTTTTTCTTAGCTGTCCTGCAGCAGATGAGATGC
GAGGATGACCACTCCTCAAAACCCCGATCCATAAAGGCTGGTGTTCGTTCTCCCAGTCTTGACACCCCCATACAT
GATTCTGGAACCCAAGCACCTGATTCTACGTCCAAAACTTGGGATTCGGCTGTCCAAGGTCGACTCCCTAACTTG
TCAAAGTCCACTAAAGCTCTTGTATCGCCGTCGCCTCGCCCCTATGATGCCTTGCACACACCGCCACAAGAAAAG
AAATGTGCAAGCATGCTAAACACTCCCGCCGTTCCAATGTTCCAAGAATCAGATTCTGGTAATGTTAGAAGTAAT
GAATTAGGTCTTCCTGCCATCAACGCATGCACGCTCAATCTCCTCGCAGCATCGGGTTTATCCAATGATGCACAA
TTACTGGCTGTCCAGCTGGTAATGAGCGGGATCCTGCAGCCCGCAGATACACCGTCTATGGTCCCAAAACGAGAA
CAGGCGACTCACTCCAGACCCATTAGAAAAGGTAGAAAACCGTCTCATGGGGATTCCAGGTCGCCTTCCAGTAGT
AAATATCCTGGCAGCGTCCTGCGAAGCGGGGCCCGGAGTGGTATACCGAAGAGTAGTGGTTTGAAGAACAATTCA
AAGAATTCTGGACTGGCAAGCAGTAGCCTTGATAGTACCCCCAACGAACCTCCGAGACTAGAAGACTTCGATCCT
GAACTGCTGAACGACATTTCTTTATGGCTGAGGAGCCTGAGATTGCACAAGTATACTTCTTGTTTCGAGGGCATG
GTATGGCAGGAGATGGTTACCATGGATGACGCTGCCTTGGAGAAAAAGGGCGTTTCTGCACTGGGTGCTAGGAGA
CGTTTGCTCAGAACATTTGATTGCGTCCGTCGCAAAATGGGGGTGGAGTCAAGTACCGATAGTGCTGCGCCTACA
ACTTCTGTCGTTCCCTCGAGCGCCGTTTCTTCCTCGATGGATGGTGTTGTTCAGGATGATTTCAGCGTACTCCAG
AGCGCGGCGCCGAGACCGTCCGCAGATTCCCTAGTTTTTGTGCCGACAAGTAAGGTGTCACGGGGCGCTGCATCT
ACTTTGCAACTCGTTGTTACCTCCACTGTCTGA
Gene >Agabi119p4|043620
ATGTCAAGCCCGGTTGCTGCCACTTGTAACACTAGTATTCCCGCTCCCACTCCGGCTACTGGGATAATGTTTGAG
GGTCTTGATCACTGGTTGAAGGACTTTCAAAGTTTCGAGTCTATCCTCGTGAGTATATATCGCCAAAGCACATAC
TGCCATGGAACGATAATTGACATAAGTAATAGGTAGAAATGGCGAATGCCTCGGCTGATGGCAAGTTCAAGAATA
AATTGACTACGACAGAGCAATGTAAGATTACACTCCGATAGGCTGCCAGGTTATAATTAAAATCTATCCCTCGTA
CTTAGGGTTCGAGGTTCTCTCTGAGCCGGAACGCACAGCGTTGGTGTATGTTCTCCTTCAACATTCCACGCAAGA
ACAAGTGCATTTTTTCTTAGCTGTCCTGCAGCAGATGAGATGCGAGGATGACCACTCCTCAAAACCCCGATCCAT
AAAGGCTGGTGTTCGTTCTCCCAGTCTTGACACCCCCATACATGATTCTGGAACCCAAGCACCTGATTCTACGTC
CAAAACTTGGGATTCGGCTGTCCAAGGTCGACTCCCTAACTTGTCAAAGTCCACTAAAGCTCTTGTATCGCCGTC
GCCTCGCCCCTATGATGCCTTGCACACACCGCCACAAGAAAAGAAATGTGCAAGCATGCTAAACACTCCCGCCGT
TCCAATGTTCCAAGAATCAGATTCTGGTAATGTTAGAAGTAATGAATTAGGTCTTCCTGCCATCAACGCATGCAC
GCTCAATCTCCTCGCAGCATCGGGTTTATCCAATGATGCACAATTACTGGCTGTCCAGCTGGTAATGAGCGGGAT
CCTGCAGCCCGCAGATACACCGTCTATGGTCCCAAAACGAGAACAGGCGACTCACTCCAGACCCATTAGAAAAGG
TAGAAAACCGTCTCATGGGGATTCCAGGTCGCCTTCCAGTAGTAAATATCCTGGCAGCGTCCTGCGAAGCGGGGC
CCGGAGTGGTATACCGAAGAGTAGTGGTTTGAAGAACAATTCAAAGAATTCTGGACTGGCAAGCAGTAGCCTTGA
TAGTACCCCCAACGAACCTCCGAGACTAGAAGACTTCGATCCTGAACTGCTGAACGACATTTCTTTATGGCTGAG
GAGCCTGAGATTGCACAAGTATACTTCTTGTTTCGAGGGCATGGTATGGCAGGAGATGGTTACCATGGATGACGC
TGCCTTGGAGAAAAAGGGCGTTTCTGCACTGGGTGCTAGGAGACGTTTGCTCAGAACATTTGATTGCGTCCGTCG
CAAAATGGGGGTGGAGTCAAGTACCGATAGTGCTGCGCCTACAACTTCTGTCGTTCCCTCGAGCGCCGTTTCTTC
CTCGATGGATGGTGTTGTTCAGGATGATTTCAGCGTACTCCAGAGCGCGGCGCCGAGACCGTCCGCAGATTCCCT
AGTTTTTGTGCCGACAAGTAAGGTGTCACGGGGCGCTGCATCTACTTTGCAACTCGTTGTTACCTCCACTGTCTG
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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