Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|043170
Gene name
Locationscaffold_02:1041979..1043130
Strand-
Gene length (bp)1151
Transcript length (bp)1050
Coding sequence length (bp)1050
Protein length (aa) 350

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01012 ETF Electron transfer flavoprotein domain 8.5E-33 27 204
PF00766 ETF_alpha Electron transfer flavoprotein FAD-binding domain 5.2E-30 228 308

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P0CN61|ETFA_CRYNB Probable electron transfer flavoprotein subunit alpha, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ETF1 PE=3 SV=1 1 347 1.0E-108
sp|P0CN60|ETFA_CRYNJ Probable electron transfer flavoprotein subunit alpha, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ETF1 PE=3 SV=1 1 347 1.0E-108
sp|Q5Y223|ETFA_CRYGW Probable electron transfer flavoprotein subunit alpha, mitochondrial OS=Cryptococcus gattii serotype B (strain WM276 / ATCC MYA-4071) GN=ETF1 PE=3 SV=1 1 347 6.0E-103
sp|Q8J112|ETFA_CRYNV Probable electron transfer flavoprotein subunit alpha, mitochondrial OS=Cryptococcus neoformans var. grubii GN=ETF1 PE=3 SV=1 15 347 2.0E-102
sp|Q99LC5|ETFA_MOUSE Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus GN=Etfa PE=1 SV=2 27 349 2.0E-88
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Swissprot ID Swissprot Description Start End E-value
sp|P0CN61|ETFA_CRYNB Probable electron transfer flavoprotein subunit alpha, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=ETF1 PE=3 SV=1 1 347 1.0E-108
sp|P0CN60|ETFA_CRYNJ Probable electron transfer flavoprotein subunit alpha, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=ETF1 PE=3 SV=1 1 347 1.0E-108
sp|Q5Y223|ETFA_CRYGW Probable electron transfer flavoprotein subunit alpha, mitochondrial OS=Cryptococcus gattii serotype B (strain WM276 / ATCC MYA-4071) GN=ETF1 PE=3 SV=1 1 347 6.0E-103
sp|Q8J112|ETFA_CRYNV Probable electron transfer flavoprotein subunit alpha, mitochondrial OS=Cryptococcus neoformans var. grubii GN=ETF1 PE=3 SV=1 15 347 2.0E-102
sp|Q99LC5|ETFA_MOUSE Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus GN=Etfa PE=1 SV=2 27 349 2.0E-88
sp|P78790|ETFA_SCHPO Probable electron transfer flavoprotein subunit alpha, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC27D7.06 PE=2 SV=3 4 347 2.0E-88
sp|P13804|ETFA_HUMAN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Homo sapiens GN=ETFA PE=1 SV=1 27 349 3.0E-88
sp|Q5RC31|ETFA_PONAB Electron transfer flavoprotein subunit alpha, mitochondrial OS=Pongo abelii GN=ETFA PE=2 SV=1 27 349 5.0E-87
sp|Q8HXY0|ETFA_MACFA Electron transfer flavoprotein subunit alpha, mitochondrial OS=Macaca fascicularis GN=ETFA PE=2 SV=1 27 349 7.0E-87
sp|Q2KJE4|ETFA_BOVIN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Bos taurus GN=ETFA PE=2 SV=1 27 349 4.0E-86
sp|Q54FD7|ETFA_DICDI Electron transfer flavoprotein subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=etfa PE=3 SV=1 26 349 8.0E-86
sp|Q93615|ETFA_CAEEL Probable electron transfer flavoprotein subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=F27D4.1 PE=3 SV=2 1 347 2.0E-85
sp|P13803|ETFA_RAT Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus GN=Etfa PE=1 SV=4 27 349 4.0E-85
sp|Q9HZP7|ETFA_PSEAE Electron transfer flavoprotein subunit alpha OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=etfA PE=3 SV=1 27 343 3.0E-82
sp|Q12480|ETFA_YEAST Probable electron transfer flavoprotein subunit alpha, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AIM45 PE=1 SV=1 27 349 2.0E-79
sp|Q9C6I6|ETFA_ARATH Electron transfer flavoprotein subunit alpha, mitochondrial OS=Arabidopsis thaliana GN=ETFA PE=1 SV=1 27 347 4.0E-78
sp|P53573|ETFA_BRADU Electron transfer flavoprotein subunit alpha OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=etfA PE=3 SV=2 96 349 3.0E-73
sp|P38974|ETFA_PARDE Electron transfer flavoprotein subunit alpha OS=Paracoccus denitrificans GN=etfA PE=1 SV=2 112 347 5.0E-71
sp|Q75LJ3|ETFA_ORYSJ Electron transfer flavoprotein subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica GN=ETFA PE=3 SV=1 79 347 2.0E-67
sp|A2XNR6|ETFA_ORYSI Electron transfer flavoprotein subunit alpha, mitochondrial OS=Oryza sativa subsp. indica GN=ETFA PE=3 SV=1 79 347 2.0E-67
sp|P94551|ETFA_BACSU Electron transfer flavoprotein subunit alpha OS=Bacillus subtilis (strain 168) GN=etfA PE=3 SV=1 27 349 3.0E-57
sp|P53578|FIXB_CLOSA Protein FixB OS=Clostridium saccharobutylicum GN=fixB PE=3 SV=1 27 349 4.0E-54
sp|P9WNG9|ETFA_MYCTU Electron transfer flavoprotein subunit alpha OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=etfA PE=1 SV=1 27 348 1.0E-49
sp|P9WNG8|ETFA_MYCTO Electron transfer flavoprotein subunit alpha OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=etfA PE=3 SV=1 27 348 1.0E-49
sp|P52039|ETFA_CLOAB Electron transfer flavoprotein subunit alpha OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=etfA PE=3 SV=2 27 348 1.0E-47
sp|P71153|ETFA_THETC Electron transfer flavoprotein subunit alpha OS=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) GN=etfA PE=3 SV=2 27 349 8.0E-47
sp|O33096|ETFA_MYCLE Electron transfer flavoprotein subunit alpha OS=Mycobacterium leprae (strain TN) GN=etfA PE=3 SV=1 25 348 1.0E-45
sp|G3KIM6|ETFA_CLOPR Acryloyl-CoA reductase electron transfer subunit beta OS=Clostridium propionicum GN=acrA PE=1 SV=1 27 349 2.0E-42
sp|O85692|ETFA_MEGEL Electron transfer flavoprotein subunit alpha OS=Megasphaera elsdenii GN=etfA PE=3 SV=1 105 349 2.0E-41
sp|P53574|FIXB_AZOVI Protein FixB OS=Azotobacter vinelandii GN=fixB PE=3 SV=1 25 348 9.0E-37
sp|P26483|FIXB_AZOC5 Protein FixB OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=fixB PE=3 SV=2 25 348 3.0E-28
sp|P77378|YDIR_ECOLI Putative electron transfer flavoprotein subunit YdiR OS=Escherichia coli (strain K12) GN=ydiR PE=3 SV=1 48 349 7.0E-27
sp|Q53209|FIXB_RHISN Protein FixB OS=Rhizobium sp. (strain NGR234) GN=fixB PE=3 SV=1 25 349 4.0E-25
sp|P10449|FIXB_BRADU Protein FixB OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=fixB PE=3 SV=2 22 348 2.0E-24
sp|P09819|FIXB_RHIME Protein FixB OS=Rhizobium meliloti (strain 1021) GN=fixB PE=3 SV=1 25 349 9.0E-24
sp|A7ZHD5|FIXB_ECO24 Protein FixB OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fixB PE=3 SV=1 124 349 3.0E-22
sp|Q1RGF6|FIXB_ECOUT Protein FixB OS=Escherichia coli (strain UTI89 / UPEC) GN=fixB PE=3 SV=1 124 349 1.0E-21
sp|A1A792|FIXB_ECOK1 Protein FixB OS=Escherichia coli O1:K1 / APEC GN=fixB PE=3 SV=1 124 349 1.0E-21
sp|B7MAG5|FIXB_ECO45 Protein FixB OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fixB PE=3 SV=1 124 349 1.0E-21
sp|P53571|ETFA_METME Electron transfer flavoprotein subunit alpha OS=Methylophilus methylotrophus GN=etfA PE=1 SV=2 227 347 2.0E-21
sp|Q0TLU7|FIXB_ECOL5 Protein FixB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=fixB PE=3 SV=1 124 349 3.0E-21
sp|B7MNP9|FIXB_ECO81 Protein FixB OS=Escherichia coli O81 (strain ED1a) GN=fixB PE=3 SV=1 124 349 3.0E-21
sp|B7NHE6|FIXB_ECO7I Protein FixB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=fixB PE=3 SV=1 124 349 4.0E-21
sp|B7UI88|FIXB_ECO27 Protein FixB OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=fixB PE=3 SV=1 124 349 4.0E-21
sp|P59674|FIXB_ECOL6 Protein FixB OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fixB PE=3 SV=1 124 349 4.0E-21
sp|B7N7R7|FIXB_ECOLU Protein FixB OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=fixB PE=3 SV=1 124 349 5.0E-21
sp|B7L4G5|FIXB_ECO55 Protein FixB OS=Escherichia coli (strain 55989 / EAEC) GN=fixB PE=3 SV=1 124 349 5.0E-21
sp|B1LFX6|FIXB_ECOSM Protein FixB OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fixB PE=3 SV=1 124 349 5.0E-21
sp|P59675|FIXB_SHIFL Protein FixB OS=Shigella flexneri GN=fixB PE=3 SV=1 124 349 5.0E-21
sp|P31574|FIXB_ECOLI Protein FixB OS=Escherichia coli (strain K12) GN=fixB PE=1 SV=3 124 349 6.0E-21
sp|B7M0D9|FIXB_ECO8A Protein FixB OS=Escherichia coli O8 (strain IAI1) GN=fixB PE=3 SV=1 124 349 6.0E-21
sp|A7ZVZ4|FIXB_ECOHS Protein FixB OS=Escherichia coli O9:H4 (strain HS) GN=fixB PE=3 SV=1 124 349 6.0E-21
sp|B6HYZ3|FIXB_ECOSE Protein FixB OS=Escherichia coli (strain SE11) GN=fixB PE=3 SV=1 124 349 6.0E-21
sp|Q32K55|FIXB_SHIDS Protein FixB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fixB PE=3 SV=1 124 349 6.0E-21
sp|Q8XA27|FIXB_ECO57 Protein FixB OS=Escherichia coli O157:H7 GN=fixB PE=3 SV=1 124 349 6.0E-21
sp|B5YYD6|FIXB_ECO5E Protein FixB OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=fixB PE=3 SV=1 124 349 6.0E-21
sp|C4ZPW8|FIXB_ECOBW Protein FixB OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=fixB PE=3 SV=1 124 349 6.0E-21
sp|B1XBG7|FIXB_ECODH Protein FixB OS=Escherichia coli (strain K12 / DH10B) GN=fixB PE=3 SV=1 124 349 6.0E-21
sp|B1IRD4|FIXB_ECOLC Protein FixB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=fixB PE=3 SV=1 124 349 6.0E-21
sp|Q3Z5W6|FIXB_SHISS Protein FixB OS=Shigella sonnei (strain Ss046) GN=fixB PE=3 SV=1 124 349 6.0E-21
sp|B7LWN3|FIXB_ESCF3 Protein FixB OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fixB PE=3 SV=1 124 343 3.0E-20
sp|P64095|FIXB_SALTY Protein FixB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fixB PE=3 SV=1 45 349 5.0E-19
sp|P64096|FIXB_SALTI Protein FixB OS=Salmonella typhi GN=fixB PE=3 SV=1 45 349 5.0E-19
sp|B5BL14|FIXB_SALPK Protein FixB OS=Salmonella paratyphi A (strain AKU_12601) GN=fixB PE=3 SV=1 45 349 5.0E-19
sp|Q5PIP0|FIXB_SALPA Protein FixB OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=fixB PE=3 SV=1 45 349 5.0E-19
sp|B5F757|FIXB_SALA4 Protein FixB OS=Salmonella agona (strain SL483) GN=fixB PE=3 SV=1 45 349 5.0E-19
sp|Q46907|YGCQ_ECOLI Putative electron transfer flavoprotein subunit YgcQ OS=Escherichia coli (strain K12) GN=ygcQ PE=3 SV=2 96 347 7.0E-18
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|043170
MLRNRYVHCHRAFVRAYATPASSPHALVFLEHRQGILDSGSLSALTAAQQLGGKISALVVGGPDQVPGIVEKAKK
LKGLDSVLHSTSPQYSAPVPEVLSPLFEKLLTESSPFTHVVSTTSSAAKSLIPRVAARLNVPAISDITSLVHDAA
DSSTTFTRPIYAGNAIATVRAPSSVSIKFFTVRSTAFSAASIQEGADAETLAVDPVDVPDSPTQHLKTTIAKSDR
PDLGVASRVISGGRALKDANTFASTLYPLADVLGAAVGASRAAVDAGYADNSLQVGQTGKVVAPELYMALGISGA
IQHLAGMKDSKLIVAVNKDPDAPIFQVADVGLVADLYEVVPQLIEKLKK*
Coding >Agabi119p4|043170
ATGCTTCGCAACAGGTATGTCCACTGCCACAGAGCTTTTGTTCGCGCATACGCAACACCAGCCTCTTCTCCCCAT
GCCCTCGTCTTCCTTGAACACCGCCAGGGTATACTTGACTCGGGATCTCTCTCCGCCTTGACCGCTGCCCAACAG
CTCGGAGGAAAAATTTCGGCTCTCGTCGTTGGTGGACCCGACCAGGTCCCAGGCATCGTGGAAAAAGCCAAAAAG
CTAAAAGGACTCGACTCTGTCCTGCACTCAACTTCCCCGCAGTACTCAGCACCAGTACCGGAAGTTCTCTCTCCC
TTATTTGAGAAACTTCTAACGGAATCCTCTCCCTTCACACACGTCGTTTCAACCACATCTTCTGCTGCAAAATCT
CTCATACCCCGTGTTGCCGCAAGACTCAATGTCCCTGCAATTTCAGACATCACTTCTCTCGTGCATGATGCCGCG
GATAGCAGTACCACATTCACTCGCCCTATCTATGCCGGAAACGCCATTGCGACTGTGCGTGCCCCTTCGTCAGTC
TCGATTAAATTCTTTACCGTTCGATCAACCGCATTCTCTGCTGCCTCAATTCAAGAAGGTGCGGATGCAGAAACC
CTGGCCGTCGATCCTGTCGATGTTCCCGACTCGCCCACTCAGCACCTTAAAACTACAATTGCCAAATCTGACAGG
CCCGATCTTGGGGTGGCTTCCCGTGTAATCTCTGGTGGAAGGGCTCTCAAGGACGCGAATACCTTTGCTTCAACC
CTTTACCCCCTTGCAGACGTTCTTGGAGCCGCTGTCGGAGCGTCGCGTGCTGCTGTAGATGCTGGTTATGCCGAT
AATTCGCTCCAAGTTGGGCAAACAGGCAAGGTCGTCGCCCCGGAACTTTACATGGCCCTTGGCATCTCTGGTGCT
ATTCAGCATCTTGCAGGAATGAAGGATTCCAAACTCATTGTTGCCGTGAATAAGGATCCCGATGCTCCCATTTTC
CAAGTCGCTGACGTGGGTCTGGTGGCTGACCTTTATGAAGTTGTGCCCCAGCTCATAGAAAAGCTGAAGAAGTAG
Transcript >Agabi119p4|043170
ATGCTTCGCAACAGGTATGTCCACTGCCACAGAGCTTTTGTTCGCGCATACGCAACACCAGCCTCTTCTCCCCAT
GCCCTCGTCTTCCTTGAACACCGCCAGGGTATACTTGACTCGGGATCTCTCTCCGCCTTGACCGCTGCCCAACAG
CTCGGAGGAAAAATTTCGGCTCTCGTCGTTGGTGGACCCGACCAGGTCCCAGGCATCGTGGAAAAAGCCAAAAAG
CTAAAAGGACTCGACTCTGTCCTGCACTCAACTTCCCCGCAGTACTCAGCACCAGTACCGGAAGTTCTCTCTCCC
TTATTTGAGAAACTTCTAACGGAATCCTCTCCCTTCACACACGTCGTTTCAACCACATCTTCTGCTGCAAAATCT
CTCATACCCCGTGTTGCCGCAAGACTCAATGTCCCTGCAATTTCAGACATCACTTCTCTCGTGCATGATGCCGCG
GATAGCAGTACCACATTCACTCGCCCTATCTATGCCGGAAACGCCATTGCGACTGTGCGTGCCCCTTCGTCAGTC
TCGATTAAATTCTTTACCGTTCGATCAACCGCATTCTCTGCTGCCTCAATTCAAGAAGGTGCGGATGCAGAAACC
CTGGCCGTCGATCCTGTCGATGTTCCCGACTCGCCCACTCAGCACCTTAAAACTACAATTGCCAAATCTGACAGG
CCCGATCTTGGGGTGGCTTCCCGTGTAATCTCTGGTGGAAGGGCTCTCAAGGACGCGAATACCTTTGCTTCAACC
CTTTACCCCCTTGCAGACGTTCTTGGAGCCGCTGTCGGAGCGTCGCGTGCTGCTGTAGATGCTGGTTATGCCGAT
AATTCGCTCCAAGTTGGGCAAACAGGCAAGGTCGTCGCCCCGGAACTTTACATGGCCCTTGGCATCTCTGGTGCT
ATTCAGCATCTTGCAGGAATGAAGGATTCCAAACTCATTGTTGCCGTGAATAAGGATCCCGATGCTCCCATTTTC
CAAGTCGCTGACGTGGGTCTGGTGGCTGACCTTTATGAAGTTGTGCCCCAGCTCATAGAAAAGCTGAAGAAGTAG
Gene >Agabi119p4|043170
ATGCTTCGCAACAGGTATGTCCACTGCCACAGAGCTTTTGTTCGCGCATACGCAACACCAGCCTCTTCTCCCCAT
GCCCTCGTCTTCCTTGAACACCGCCAGGGTATACTTGACTCGGGATCTCTCTCCGCCTTGACCGCTGCCCAACAG
CTCGGAGGAAAAATTTCGGCTCTCGTCGTTGGTGGACCCGACCAGGTCCCAGGCATCGTGGAAAAAGCCAAAAAG
TACGTGTGCTAACGGCGTTTAGACAGTCTAACCGACATGTCATCAGGCTAAAAGGACTCGACTCTGTCCTGCACT
CAACTTCCCCGCAGTACTCAGCACCAGTACCGGAAGTTCTCTCTCCCTTATTTGAGAAACTTCTAACGGAATCCT
CTCCCTTCACACACGTCGTTTCAACCACATCTTCTGCTGCAAAATCTCTCATACCCCGTGTTGCCGCAAGACTCA
ATGTCCCTGCAATTTCAGACATCACTTCTCTCGTGCATGATGCCGCGGATAGCAGTACCACATTCACTCGCCCTA
TCTATGCCGGAAACGCCATTGCGACTGTGCGTGCCCCTTCGTCAGTCTCGATTAAATTCTTTACCGTTCGATCAA
CCGCATTCTCTGCTGCCTCAATTCAAGAAGGTGCGGATGCAGAAACCCTGGCCGTCGATCCTGTCGATGTTCCCG
ACTCGCCCACTCAGCACCTTAAAACTACAATTGCCAAATCTGACAGGCCCGATCTTGGGGTGGCTTCCCGTGTAA
TCTCTGGTGGAAGGGCTCTCAAGGACGCGAATACCTTTGCTTCAACCCTTTACCCCCTTGCAGACGTTCTTGGAG
CCGCTGTCGGAGCGTCGCGTGCTGCTGTAGATGCTGGTTATGCCGATAATTCGCTCCAAGTTGGGCAAACAGGCA
AGGTCGTCGCCCCGGAACTTTACATGGCCCTTGGCATCTCTGGTGCTATTCAGCATCTTGCAGGAATGAAGGATT
CCAAACTCATTGTTGCCGTGAATAAGGTTAGTCTTGACTTCATTTCGTCTGCACTCCGATGTGCTGATATCTATC
AAAAGGATCCCGATGCTCCCATTTTCCAAGTCGCTGACGTGGGTCTGGTGGCTGACCTTTATGAAGTTGTGCCCC
AGCTCATAGAAAAGCTGAAGAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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