Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|042420
Gene name
Location	scaffold_02:859637..860268
Strand	+
Gene length (bp)	631
Transcript length (bp)	534
Coding sequence length (bp)	534
Protein length (aa)	178

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02179	BAG	BAG domain	3.2E-20	88	170

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O59739\|BAG1B_SCHPO	BAG family molecular chaperone regulator 1B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bag102 PE=1 SV=1	40	169	1.0E-07

GO

GO Term	Description	Terminal node
GO:0051087	chaperone binding	Yes
GO:0005515	protein binding	No
GO:0003674	molecular_function	No
GO:0005488	binding	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 16	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|042420 MLLKWQKQRFTVPFPGPAAPLAALRHHAAELSHLPPAAFKLIHAGAVMKDDAAPLSAYKLTENSTVFLIGDDPTT PASASEHHSVSRIQAELSSVRSQLTPHVHAFLAALRPPSDMPPTPQDHTRLGELLLQSLLRLDAIAPERDWPTAR AERKAAVREVQELLDNLDSAWAAYSNP*
Coding	>Agabi119p4\|042420 ATGCTCCTCAAGTGGCAGAAACAAAGATTCACCGTTCCCTTCCCCGGCCCCGCCGCACCCCTCGCCGCCCTCCGC CACCATGCCGCAGAGCTTTCCCACCTTCCCCCCGCCGCTTTCAAGCTCATCCATGCCGGCGCAGTCATGAAAGAC GACGCCGCCCCCCTGTCCGCCTACAAGCTCACCGAAAACTCCACCGTCTTTCTGATCGGAGACGACCCGACCACC CCTGCCTCTGCCTCTGAGCACCACTCCGTCTCCCGCATCCAAGCAGAACTCTCCTCCGTCCGCTCCCAGCTCACC CCCCACGTCCACGCCTTCCTCGCCGCCCTCCGCCCCCCATCCGACATGCCTCCCACCCCGCAGGACCACACCCGT CTCGGCGAATTGCTTCTCCAGTCTCTCCTCCGTCTTGACGCAATCGCTCCGGAGCGCGACTGGCCGACCGCCCGT GCAGAGCGCAAGGCCGCTGTCCGAGAAGTCCAGGAGCTTCTCGACAATCTAGACTCGGCCTGGGCTGCCTATTCA AATCCGTAA
Transcript	>Agabi119p4\|042420 ATGCTCCTCAAGTGGCAGAAACAAAGATTCACCGTTCCCTTCCCCGGCCCCGCCGCACCCCTCGCCGCCCTCCGC CACCATGCCGCAGAGCTTTCCCACCTTCCCCCCGCCGCTTTCAAGCTCATCCATGCCGGCGCAGTCATGAAAGAC GACGCCGCCCCCCTGTCCGCCTACAAGCTCACCGAAAACTCCACCGTCTTTCTGATCGGAGACGACCCGACCACC CCTGCCTCTGCCTCTGAGCACCACTCCGTCTCCCGCATCCAAGCAGAACTCTCCTCCGTCCGCTCCCAGCTCACC CCCCACGTCCACGCCTTCCTCGCCGCCCTCCGCCCCCCATCCGACATGCCTCCCACCCCGCAGGACCACACCCGT CTCGGCGAATTGCTTCTCCAGTCTCTCCTCCGTCTTGACGCAATCGCTCCGGAGCGCGACTGGCCGACCGCCCGT GCAGAGCGCAAGGCCGCTGTCCGAGAAGTCCAGGAGCTTCTCGACAATCTAGACTCGGCCTGGGCTGCCTATTCA AATCCGTAA
Gene	>Agabi119p4\|042420 ATGCTCCTCAAGTGGCAGAAACAAAGGCACGCCCTCTCTCCCAGCCCACTGACCGACACTGACTCCCTTCACAGA TTCACCGTTCCCTTCCCCGGCCCCGCCGCACCCCTCGCCGCCCTCCGCCACCATGCCGCAGAGCTTTCCCACCTT CCCCCCGCCGCTTTCAAGCTCATCCATGCCGGCGCAGTCATGAAAGACGACGCCGCCCCCCGTACGCTCTCTTTT TTTCTTACTCAACCCCTCGCTCACGTTGCTGTCAGTGTCCGCCTACAAGCTCACCGAAAACTCCACCGTCTTTCT GATCGGAGACGACCCGACCACCCCTGCCTCTGCCTCTGAGCACCACTCCGTCTCCCGCATCCAAGCAGAACTCTC CTCCGTCCGCTCCCAGCTCACCCCCCACGTCCACGCCTTCCTCGCCGCCCTCCGCCCCCCATCCGACATGCCTCC CACCCCGCAGGACCACACCCGTCTCGGCGAATTGCTTCTCCAGTCTCTCCTCCGTCTTGACGCAATCGCTCCGGA GCGCGACTGGCCGACCGCCCGTGCAGAGCGCAAGGCCGCTGTCCGAGAAGTCCAGGAGCTTCTCGACAATCTAGA CTCGGCCTGGGCTGCCTATTCAAATCCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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