© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|041740 |
| Gene name | |
| Location | scaffold_02:690608..692387 |
| Strand | - |
| Gene length (bp) | 1779 |
| Transcript length (bp) | 972 |
| Coding sequence length (bp) | 972 |
| Protein length (aa) | 324 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02353 | CMAS | Mycolic acid cyclopropane synthetase | 9.7E-30 | 67 | 269 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 4.8E-14 | 126 | 219 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 4.5E-13 | 121 | 223 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 5.0E-12 | 127 | 219 |
| PF05175 | MTS | Methyltransferase small domain | 1.3E-08 | 123 | 197 |
| PF08242 | Methyltransf_12 | Methyltransferase domain | 3.0E-08 | 127 | 219 |
| PF13489 | Methyltransf_23 | Methyltransferase domain | 1.1E-07 | 120 | 219 |
| PF03848 | TehB | Tellurite resistance protein TehB | 3.8E-06 | 125 | 206 |
| PF02390 | Methyltransf_4 | Putative methyltransferase | 6.0E-06 | 125 | 184 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5C9L6|CNMT_THLFG | (S)-coclaurine N-methyltransferase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1 | 17 | 282 | 5.0E-56 |
| sp|Q7XB08|CNMT_PAPSO | (S)-coclaurine N-methyltransferase OS=Papaver somniferum GN=CNMT PE=1 SV=1 | 12 | 280 | 4.0E-50 |
| sp|C3SBS8|TNMT_ESCCA | (S)-tetrahydroprotoberberine N-methyltransferase OS=Eschscholzia californica PE=1 SV=1 | 12 | 284 | 1.0E-48 |
| sp|Q108P1|TNMT_PAPSO | (S)-tetrahydroprotoberberine N-methyltransferase OS=Papaver somniferum PE=1 SV=1 | 12 | 284 | 8.0E-47 |
| sp|C3SBU4|TNMT2_PAPBR | Probable (S)-tetrahydroprotoberberine N-methyltransferase 2 OS=Papaver bracteatum PE=2 SV=1 | 14 | 284 | 1.0E-45 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5C9L6|CNMT_THLFG | (S)-coclaurine N-methyltransferase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1 | 17 | 282 | 5.0E-56 |
| sp|Q7XB08|CNMT_PAPSO | (S)-coclaurine N-methyltransferase OS=Papaver somniferum GN=CNMT PE=1 SV=1 | 12 | 280 | 4.0E-50 |
| sp|C3SBS8|TNMT_ESCCA | (S)-tetrahydroprotoberberine N-methyltransferase OS=Eschscholzia californica PE=1 SV=1 | 12 | 284 | 1.0E-48 |
| sp|Q108P1|TNMT_PAPSO | (S)-tetrahydroprotoberberine N-methyltransferase OS=Papaver somniferum PE=1 SV=1 | 12 | 284 | 8.0E-47 |
| sp|C3SBU4|TNMT2_PAPBR | Probable (S)-tetrahydroprotoberberine N-methyltransferase 2 OS=Papaver bracteatum PE=2 SV=1 | 14 | 284 | 1.0E-45 |
| sp|C3SBU5|TNMT1_PAPBR | (S)-tetrahydroprotoberberine N-methyltransferase 1 OS=Papaver bracteatum PE=1 SV=1 | 12 | 284 | 1.0E-45 |
| sp|C3SBW0|PNMT_THLFG | Pavine N-methyltransferase OS=Thalictrum flavum subsp. glaucum PE=1 SV=1 | 12 | 282 | 1.0E-42 |
| sp|P0A9H7|CFA_ECOLI | Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli (strain K12) GN=cfa PE=1 SV=2 | 69 | 266 | 8.0E-20 |
| sp|P0A9H8|CFA_ECOL6 | Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=cfa PE=3 SV=2 | 69 | 266 | 8.0E-20 |
| sp|P31049|FAMT_PSEPU | Probable fatty acid methyltransferase OS=Pseudomonas putida PE=3 SV=1 | 67 | 206 | 2.0E-14 |
| sp|P9WPB7|CMAS1_MYCTU | Cyclopropane mycolic acid synthase 1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=cmaA1 PE=1 SV=1 | 66 | 211 | 6.0E-14 |
| sp|A5U866|CMAS1_MYCTA | Cyclopropane mycolic acid synthase 1 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=cmaA1 PE=1 SV=1 | 66 | 211 | 6.0E-14 |
| sp|P9WPB6|CMAS1_MYCTO | Cyclopropane mycolic acid synthase 1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=cmaA1 PE=3 SV=1 | 66 | 211 | 6.0E-14 |
| sp|O69687|FAMT_MYCTU | Probable fatty acid methyltransferase Rv3720 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv3720 PE=1 SV=4 | 67 | 220 | 2.0E-13 |
| sp|Q5APD4|C9MT_CANAL | Sphingolipid C9-methyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MTS1 PE=1 SV=1 | 73 | 261 | 2.0E-13 |
| sp|Q49807|CMAS2_MYCLE | Cyclopropane mycolic acid synthase 2 OS=Mycobacterium leprae (strain TN) GN=cmaA2 PE=3 SV=1 | 66 | 265 | 5.0E-13 |
| sp|C4R7Z3|C9MT_PICPG | Sphingolipid C9-methyltransferase OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr4_0465 PE=1 SV=1 | 61 | 286 | 2.0E-11 |
| sp|I1RNL0|C9MT2_GIBZE | Sphingolipid C9-methyltransferase 2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MT2 PE=3 SV=1 | 61 | 236 | 3.0E-11 |
| sp|Q7U1K0|MMAA3_MYCBO | Methoxy mycolic acid synthase MmaA3 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaB PE=1 SV=1 | 57 | 203 | 1.0E-10 |
| sp|P0CH91|MMAA3_MYCTU | Methoxy mycolic acid synthase MmaA3 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmaA3 PE=1 SV=1 | 57 | 203 | 1.0E-10 |
| sp|I1RJD6|C9MT1_GIBZE | Sphingolipid C9-methyltransferase 1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MT1 PE=3 SV=1 | 85 | 204 | 1.0E-10 |
| sp|A5U028|MMAA3_MYCTA | Methoxy mycolic acid synthase MmaA3 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mmaA3 PE=1 SV=1 | 57 | 203 | 1.0E-10 |
| sp|Q6MX39|UMAA_MYCTU | S-adenosylmethionine-dependent methyltransferase UmaA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=umaA PE=1 SV=1 | 74 | 274 | 2.0E-10 |
| sp|P9WPB3|CMAS3_MYCTU | Cyclopropane mycolic acid synthase 3 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=pcaA PE=1 SV=1 | 66 | 233 | 4.0E-10 |
| sp|P9WPB2|CMAS3_MYCTO | Cyclopropane mycolic acid synthase 3 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=pcaA PE=3 SV=1 | 66 | 233 | 4.0E-10 |
| sp|Q79FX8|MMAA4_MYCTU | Hydroxymycolate synthase MmaA4 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmaA4 PE=1 SV=1 | 53 | 213 | 6.0E-10 |
| sp|A5U027|MMAA4_MYCTA | Hydroxymycolate synthase MmaA4 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mmaA4 PE=1 SV=1 | 53 | 213 | 6.0E-10 |
| sp|P0A5P1|CMAS2_MYCBO | Cyclopropane mycolic acid synthase 2 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaA2 PE=3 SV=1 | 66 | 273 | 7.0E-10 |
| sp|A5U029|MMAA2_MYCTA | Cyclopropane mycolic acid synthase MmaA2 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mmaA2 PE=1 SV=1 | 71 | 206 | 7.0E-10 |
| sp|Q79FX6|MMAA2_MYCTU | Cyclopropane mycolic acid synthase MmaA2 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmaA2 PE=1 SV=1 | 71 | 206 | 7.0E-10 |
| sp|P9WPB4|CMAS2_MYCTO | Cyclopropane mycolic acid synthase 2 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=cmaA2 PE=3 SV=1 | 66 | 273 | 7.0E-10 |
| sp|P9WPB5|CMAS2_MYCTU | Cyclopropane mycolic acid synthase 2 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=cmaA2 PE=1 SV=1 | 66 | 273 | 7.0E-10 |
| sp|Q7U1K1|MMAA4_MYCBO | Hydroxymycolate synthase MmaA4 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaA PE=1 SV=1 | 53 | 213 | 8.0E-10 |
| sp|Q7U1J9|MMAA2_MYCBO | Cyclopropane mycolic acid synthase MmaA2 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaC PE=1 SV=1 | 71 | 206 | 8.0E-10 |
| sp|Q482G8|UBIG_COLP3 | Ubiquinone biosynthesis O-methyltransferase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=ubiG PE=3 SV=1 | 124 | 219 | 5.0E-07 |
| sp|P9WPB1|MMAA1_MYCTU | Mycolic acid methyltransferase MmaA1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmaA1 PE=1 SV=1 | 70 | 266 | 9.0E-07 |
| sp|P9WPB0|MMAA1_MYCTO | Mycolic acid methyltransferase MmaA1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=mmaA1 PE=3 SV=1 | 70 | 266 | 9.0E-07 |
| sp|A5U030|MMAA1_MYCTA | Mycolic acid methyltransferase MmaA1 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mmaA1 PE=1 SV=1 | 70 | 266 | 9.0E-07 |
| sp|P0A5Q1|MMAA1_MYCBO | Mycolic acid methyltransferase MmaA1 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=cmaD PE=3 SV=1 | 70 | 266 | 9.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | Yes |
| GO:0006400 | tRNA modification | Yes |
| GO:0008168 | methyltransferase activity | Yes |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0006396 | RNA processing | No |
| GO:0009451 | RNA modification | No |
| GO:0008173 | RNA methyltransferase activity | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | No |
| GO:0034470 | ncRNA processing | No |
| GO:0006399 | tRNA metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0140101 | catalytic activity, acting on a tRNA | No |
| GO:0008152 | metabolic process | No |
| GO:0016740 | transferase activity | No |
| GO:0008033 | tRNA processing | No |
| GO:0003824 | catalytic activity | No |
| GO:0008150 | biological_process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0034660 | ncRNA metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0140098 | catalytic activity, acting on RNA | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0016423 | tRNA (guanine) methyltransferase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043412 | macromolecule modification | No |
| GO:0140640 | catalytic activity, acting on a nucleic acid | No |
| GO:0008175 | tRNA methyltransferase activity | No |
| GO:0016070 | RNA metabolic process | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0009987 | cellular process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|041740 MDFILQNGYNLLDRGLVPDFVLRRVIRLLCHGRLREIDLGSFEANHAAKMQWIEDVKARAVIADVPAKANEQHYE VSTKFMLSTLGPHAKYSSCLYPTGNETLAEAEECMLESYCWKAQLRDGMEILDLGCGWGSLSLFLAKKYPNSNIT GLSNSATQKSYIDSTAKERGLTNIKIITADVNTFDFENPKKFDRILSVEMFEHMKNYQALFQKISTWLRSTKETT EIDDPALLFVHIFCHKSTPYHFVEDDGWMAKNFFSGGTMPSHDLFTYFQDDLTLMKNIVKKDCRSLNRTPLRRVA RLKRAEKPSTGSVTRMGSRTLSL* |
| Coding | >Agabi119p4|041740 ATGGATTTCATTCTACAAAACGGGTACAACTTATTGGATAGGGGACTGGTACCGGATTTTGTTCTACGGCGTGTC ATTCGACTTCTTTGCCATGGGCGCCTCCGCGAGATTGATCTTGGTTCCTTTGAGGCCAACCATGCTGCTAAAATG CAATGGATCGAAGATGTGAAAGCCCGTGCGGTAATTGCAGACGTACCCGCCAAAGCCAACGAACAACATTACGAG GTTTCAACCAAGTTTATGCTGTCGACTTTGGGTCCTCATGCCAAATACTCATCATGTCTCTACCCGACTGGAAAT GAAACCCTGGCAGAAGCAGAAGAATGTATGCTGGAAAGTTACTGCTGGAAAGCTCAGCTAAGAGATGGGATGGAA ATCCTCGACCTTGGATGTGGATGGGGGAGTCTTTCTCTTTTCTTAGCCAAGAAATATCCCAATTCGAATATCACT GGTCTTTCAAACTCGGCGACGCAGAAATCATATATCGATTCGACGGCTAAAGAACGGGGATTGACGAATATAAAG ATTATCACCGCAGATGTCAATACGTTTGATTTCGAAAATCCCAAAAAGTTCGACCGCATTTTGTCTGTTGAGATG TTTGAACATATGAAGAACTATCAAGCACTTTTCCAGAAAATATCTACCTGGCTCCGGTCGACTAAAGAGACTACA GAAATAGACGACCCTGCACTCTTATTTGTTCATATCTTCTGCCACAAATCTACACCTTACCATTTCGTCGAGGAT GACGGTTGGATGGCCAAGAACTTTTTCTCAGGCGGAACAATGCCTTCACACGATCTTTTCACTTATTTCCAAGAT GATCTGACGTTAATGAAGAACATAGTAAAGAAGGATTGCAGGAGCTTGAACAGGACGCCGTTGCGAAGGGTAGCT CGGCTGAAGAGGGCAGAAAAGCCTTCTACAGGTTCCGTGACAAGAATGGGGAGTCGGACATTATCTCTTTAA |
| Transcript | >Agabi119p4|041740 ATGGATTTCATTCTACAAAACGGGTACAACTTATTGGATAGGGGACTGGTACCGGATTTTGTTCTACGGCGTGTC ATTCGACTTCTTTGCCATGGGCGCCTCCGCGAGATTGATCTTGGTTCCTTTGAGGCCAACCATGCTGCTAAAATG CAATGGATCGAAGATGTGAAAGCCCGTGCGGTAATTGCAGACGTACCCGCCAAAGCCAACGAACAACATTACGAG GTTTCAACCAAGTTTATGCTGTCGACTTTGGGTCCTCATGCCAAATACTCATCATGTCTCTACCCGACTGGAAAT GAAACCCTGGCAGAAGCAGAAGAATGTATGCTGGAAAGTTACTGCTGGAAAGCTCAGCTAAGAGATGGGATGGAA ATCCTCGACCTTGGATGTGGATGGGGGAGTCTTTCTCTTTTCTTAGCCAAGAAATATCCCAATTCGAATATCACT GGTCTTTCAAACTCGGCGACGCAGAAATCATATATCGATTCGACGGCTAAAGAACGGGGATTGACGAATATAAAG ATTATCACCGCAGATGTCAATACGTTTGATTTCGAAAATCCCAAAAAGTTCGACCGCATTTTGTCTGTTGAGATG TTTGAACATATGAAGAACTATCAAGCACTTTTCCAGAAAATATCTACCTGGCTCCGGTCGACTAAAGAGACTACA GAAATAGACGACCCTGCACTCTTATTTGTTCATATCTTCTGCCACAAATCTACACCTTACCATTTCGTCGAGGAT GACGGTTGGATGGCCAAGAACTTTTTCTCAGGCGGAACAATGCCTTCACACGATCTTTTCACTTATTTCCAAGAT GATCTGACGTTAATGAAGAACATAGTAAAGAAGGATTGCAGGAGCTTGAACAGGACGCCGTTGCGAAGGGTAGCT CGGCTGAAGAGGGCAGAAAAGCCTTCTACAGGTTCCGTGACAAGAATGGGGAGTCGGACATTATCTCTTTAA |
| Gene | >Agabi119p4|041740 ATGGATTTCATTCTACAAAACGGGTACAACTTATTGGATAGGGTCTGTCATGACACAAGTCCGTATACCTCGTCT GACACGATGCAACGCAGGGACTGGTACCGGATTTTGTTCTACGGCGTGTCATTCGACTTCTTTGCCATGGGCGCC TCCGCGAGATTGATCTTGGTTCCTTTGAGGCCAACCATGCTGCTAAAATGCAATGGATCGAAGATGTGAAAGCCC GTGCGGTAATTGCAGACGTACCCGCCAAAGCCAACGAACAACATTACGAGGTGTGTCCAGGTCAACGTCTAACAA CCGTTCGTGCCTGGTTAAACAAATCTAGGTTTCAACCAAGTTTATGCTGTCGACTTTGGGTCCTCATGCCAAATA CTCATCATGTCTCTACCCGACTGGAAATGAAACCCTGGCAGAAGCAGAAGAATGTATGCTGGAAAGTTACTGCTG GAAAGCTCAGCTAAGAGATGGGATGGAAATCCTCGACCTTGGATGTGGTATGGCTACGTTTATTTCTCAAACTCA GGGTTGTGATGGTAACGAGGATTACAATAAAAGGATGGGGGAGTCTTTCTCTTTTCTTAGCCAAGGTTCGTAGTG CGGAACATCATCGGCATTAGAGTTGCGCACGCTTACTTTTGCTTTTCATCAGAAATATCCCAATTCGAATATCAC TGGTCTTTCAAACTCGGCGACGCAGAAATCATATATCGATTCGACGGCTAAAGAACGGGGATTGACGAATATAAA GGTATCGGAACCAATATATATCGTTAGCCATGACTAACAACCTAATAGATTATCACCGCAGATGTCAATACGTTT GATTTCGAAAATCCCAAAAAGTAAGCGACGCCGCCTAAAATCGACTCAACCGCATATCTGAAGCAATTCAAAGGT TCGACCGCATTTTGTCTGTTGAGGTAAGTAGACTTTCACGTATTCTACATCCATCTGTCAACATGACTCCACTGT TGGGCATCATGACGCAGATGTTTGAACATATGAAGAACTATCAAGCACTTTTCCAGAAAATATCTACCTGGCTCC GGTCGACTAAAGAGACTACAGAAATAGACGACCCTGCACTCTTATTTGTTCATATCTTCTGCCACAAATCTACAC CTTACCATTTCGTCGAGGATGACGGTTGGATGGCCAAGAACTTTTTCTCAGGTGACTTCCATCACTATTCAACTG TTTCATCTGAGTGAAGGATTCAAATCTTTTGTCAATTACATACTACTCACTTAGGCGGAACAATGCCTTCACACG ATCTTTTCGTGAGTACCATTGATTGTAACTCCCCCCTTAGCAACACGAAGTATTGATGAAACGTCCGTTGTTTAG ACTTATTTCCAAGATGATCTGACGTTAATGAAGAGTTGGTTTATTTCTGGCACCAACTATTCCAGAACATGCGAA GATTGGCTGAAGACTCAAGATAGACATAGTAAAGGTGTCCAACAACTCCTCAATCATCTCACTTCCCACTAACGT TTGCCTGCCCGAAATAAAGAAGGATTGCAGGAGCTTGAACAGGACGCCGTTGCGAAGGGTAGCTCGGCTGAAGAG GGCAGAAAAGCCTTCTACAGGTTAGCCTTTTTCGTTCCAGTGTCGAGCTAAATGACAACGTAATGGCAGGTTCCG TGTATTTTATATGGCTTGTTCAGAGTTGTTTAACCTGAACGGAGGACAAGAGTATGTGGTCATATGTTTAGCCAA CATAACTGATTCTCACAATCTGGCCAGATGGGGAGTCGGACATTATCTCTTTAA |