© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|040570 |
| Gene name | |
| Location | scaffold_02:470214..472755 |
| Strand | - |
| Gene length (bp) | 2541 |
| Transcript length (bp) | 2139 |
| Coding sequence length (bp) | 2139 |
| Protein length (aa) | 713 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05346 | DUF747 | Eukaryotic membrane protein family | 1.4E-112 | 263 | 632 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O60067|TAPT1_SCHPO | Endoplasmic reticulum membrane protein 65 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC13G1.05 PE=1 SV=1 | 181 | 677 | 3.0E-95 |
| sp|Q4VBD2|TAPT1_MOUSE | Transmembrane anterior posterior transformation protein 1 OS=Mus musculus GN=Tapt1 PE=1 SV=2 | 181 | 561 | 1.0E-77 |
| sp|Q6NXT6|TAPT1_HUMAN | Transmembrane anterior posterior transformation protein 1 homolog OS=Homo sapiens GN=TAPT1 PE=1 SV=1 | 181 | 561 | 2.0E-77 |
| sp|Q5ZLG8|TAPT1_CHICK | Transmembrane anterior posterior transformation protein 1 homolog OS=Gallus gallus GN=TAPT1 PE=2 SV=2 | 169 | 561 | 1.0E-76 |
| sp|Q550C1|TAPT1_DICDI | Protein TAPT1 homolog OS=Dictyostelium discoideum GN=DDB_G0277313 PE=3 SV=2 | 181 | 552 | 3.0E-75 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O60067|TAPT1_SCHPO | Endoplasmic reticulum membrane protein 65 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC13G1.05 PE=1 SV=1 | 181 | 677 | 3.0E-95 |
| sp|Q4VBD2|TAPT1_MOUSE | Transmembrane anterior posterior transformation protein 1 OS=Mus musculus GN=Tapt1 PE=1 SV=2 | 181 | 561 | 1.0E-77 |
| sp|Q6NXT6|TAPT1_HUMAN | Transmembrane anterior posterior transformation protein 1 homolog OS=Homo sapiens GN=TAPT1 PE=1 SV=1 | 181 | 561 | 2.0E-77 |
| sp|Q5ZLG8|TAPT1_CHICK | Transmembrane anterior posterior transformation protein 1 homolog OS=Gallus gallus GN=TAPT1 PE=2 SV=2 | 169 | 561 | 1.0E-76 |
| sp|Q550C1|TAPT1_DICDI | Protein TAPT1 homolog OS=Dictyostelium discoideum GN=DDB_G0277313 PE=3 SV=2 | 181 | 552 | 3.0E-75 |
| sp|Q5EAY8|TAPT1_XENLA | Transmembrane anterior posterior transformation protein 1 homolog OS=Xenopus laevis GN=tapt1 PE=2 SV=1 | 168 | 561 | 1.0E-70 |
| sp|Q9VED0|TAPT1_DROME | Protein TAPT1 homolog OS=Drosophila melanogaster GN=CG7218 PE=2 SV=2 | 181 | 552 | 8.0E-70 |
| sp|A2BIE7|TAPT1_DANRE | Transmembrane anterior posterior transformation protein 1 homolog OS=Danio rerio GN=tapt1 PE=3 SV=1 | 181 | 542 | 2.0E-64 |
| sp|Q9U3H8|TAPT1_CAEEL | Protein TAPT1 homolog OS=Caenorhabditis elegans GN=F26F2.7 PE=3 SV=1 | 156 | 561 | 5.0E-62 |
| sp|P40085|TAPT1_YEAST | Endoplasmic reticulum membrane protein 65 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP65 PE=1 SV=1 | 204 | 568 | 1.0E-59 |
| sp|F4HVJ3|POD1_ARATH | Protein POLLEN DEFECTIVE IN GUIDANCE 1 OS=Arabidopsis thaliana GN=POD1 PE=1 SV=1 | 199 | 510 | 4.0E-49 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 232 | 254 | 22 |
| 2 | 267 | 286 | 19 |
| 3 | 351 | 373 | 22 |
| 4 | 541 | 563 | 22 |
| 5 | 603 | 625 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|040570 MTTSPPQKPKKLHRRFSSGSHDILTIITNQGQSRTRDKPALQTSPSAPLVQKPGLQKRDFSLPEQRPTHTHERTY STDGSDVDVGTDWVQRERAHRPQLNGLTNGSLPGNLGFQGGRHSPPTAYASLPATPRLESFEDKADPPSLKMPLS ASLQVPILDPPTSRRQHAREDSKVYGPPPFSIWDYLREELLATDFDSHQELKWERVSNFLNIPVAVEKIIGFGFF LCLDSFLYTFTVLPIRFSLAFIRLIVNLFRRSASPLPPSQKADLLRALLLVISVIVLVPMTDASKIYHKIRGQDT IKLYVIFNALEIADRLCSSIGQDILDCLFSRSTLVPLSHKIPVTANTLTPFLYFFLALAYVLSHTLVMVYQLISL NVAINSYEYALLTLLVSNQFVEIKGSVFKKFEKDTLFQITCADVVERFNLALMLAVVAFRNLIELSGSDFDFAGG YVLPKSFGWFRGNNVLWTISYPVLTVLCSEMLVDWLKHAFITKFNHIRPSVYERYTDVLCLDLASASAVNRKGAR KHSYADQAPLVARRLGFASLPLAVMVILLGSQSISLLFSDLQPLPYSFWNLLSIYNLDLNTLSLSLRSAEVVKYI TLGVMGVLFWLCFVVIKVIIGVNLLTYATRRQAGMDEREAMDIVNNFGRDPIGEGNDERKYNKNLKKYLDDDEDD APRLPDMGEIRPGQEMNKKERVKLEDLTRFTMVKRIY* |
| Coding | >Agabi119p4|040570 ATGACGACATCTCCGCCCCAAAAGCCCAAGAAATTGCATCGACGCTTTTCCTCTGGCAGCCACGACATTCTTACG ATTATAACTAATCAAGGCCAATCCAGGACCCGGGACAAACCTGCTCTCCAAACTTCTCCTTCCGCTCCACTCGTA CAAAAGCCCGGTCTGCAAAAGCGGGATTTCTCACTGCCAGAACAACGGCCTACGCACACACATGAACGAACGTAT TCTACCGACGGGTCTGATGTAGATGTAGGTACAGATTGGGTGCAGAGAGAAAGGGCGCACAGGCCACAGTTGAAC GGCTTGACAAATGGCAGTCTTCCTGGTAATTTGGGTTTTCAAGGCGGACGTCACAGTCCCCCAACGGCGTATGCA TCGTTACCAGCAACCCCGCGCCTAGAGTCGTTCGAAGACAAAGCAGACCCTCCTTCACTGAAGATGCCTCTCTCG GCGAGCCTACAAGTGCCAATATTAGACCCACCTACCTCGCGGCGCCAACATGCCAGAGAAGATAGTAAAGTGTAT GGACCTCCACCTTTCTCAATATGGGATTACCTCCGGGAAGAACTTTTGGCGACGGATTTCGATTCGCACCAAGAG TTGAAGTGGGAACGTGTCAGCAATTTCCTAAACATACCTGTGGCCGTGGAAAAAATCATTGGCTTTGGTTTTTTC CTATGCTTGGATAGTTTCTTGTACACCTTTACCGTTCTTCCCATCCGTTTCAGTCTCGCCTTCATCCGCCTCATT GTTAATTTATTCCGGAGATCTGCATCTCCCCTTCCCCCATCGCAGAAAGCCGATCTGCTCAGAGCGTTATTACTC GTCATCTCGGTAATTGTGCTGGTACCGATGACAGATGCGAGCAAAATTTATCACAAAATTCGTGGTCAGGATACT ATTAAGTTATATGTTATATTCAATGCACTAGAGATTGCGGATAGGCTCTGCTCCTCCATAGGCCAGGATATCCTT GATTGTTTGTTCTCGCGCTCGACGCTCGTACCACTTTCTCATAAAATTCCTGTCACGGCGAATACGCTCACACCT TTCCTGTACTTCTTTCTTGCGCTTGCATACGTTTTGTCTCACACTCTAGTCATGGTATATCAACTGATCTCTCTC AATGTTGCCATCAATTCGTATGAATACGCTCTATTGACGCTTCTTGTATCCAACCAATTCGTCGAGATCAAGGGC AGTGTCTTCAAGAAGTTTGAAAAAGATACCCTTTTCCAGATAACGTGTGCTGATGTCGTTGAACGGTTCAACCTT GCTTTAATGCTTGCAGTCGTAGCATTCAGAAATCTCATAGAGCTCAGTGGCTCCGATTTTGATTTTGCTGGAGGT TATGTTCTACCCAAGAGTTTCGGTTGGTTCAGGGGAAACAACGTTCTGTGGACCATATCTTATCCCGTGCTCACT GTGCTGTGCTCTGAAATGCTTGTCGACTGGTTGAAGCACGCCTTCATTACGAAGTTCAACCACATTCGGCCGTCA GTTTATGAGCGCTATACAGACGTCTTGTGTCTCGACCTAGCTAGTGCTAGTGCTGTCAATAGAAAAGGCGCCAGA AAGCACTCGTATGCTGACCAAGCCCCACTCGTGGCCCGCCGGCTTGGATTTGCTTCGTTACCCCTTGCAGTTATG GTGATCCTTCTGGGATCTCAGTCGATTAGTCTATTGTTTTCCGATCTCCAACCTCTACCATATTCCTTCTGGAAT CTGCTGTCAATCTATAATCTCGATCTCAACACCCTTTCGCTATCGCTCCGAAGCGCTGAGGTAGTCAAGTACATA ACTCTGGGTGTAATGGGCGTGTTGTTTTGGTTGTGTTTTGTGGTCATCAAGGTCATTATTGGCGTGAATTTACTA ACTTATGCCACCCGAAGGCAGGCTGGTATGGATGAACGGGAAGCAATGGACATTGTTAATAATTTCGGTCGCGAT CCCATAGGGGAAGGGAATGATGAACGAAAATACAATAAGAATCTGAAGAAGTATTTGGATGACGACGAAGACGAT GCTCCACGGCTGCCGGACATGGGCGAAATTCGGCCAGGTCAAGAGATGAATAAGAAGGAAAGAGTGAAATTAGAG GATCTGACGAGGTTTACGATGGTGAAGCGAATTTATTAG |
| Transcript | >Agabi119p4|040570 ATGACGACATCTCCGCCCCAAAAGCCCAAGAAATTGCATCGACGCTTTTCCTCTGGCAGCCACGACATTCTTACG ATTATAACTAATCAAGGCCAATCCAGGACCCGGGACAAACCTGCTCTCCAAACTTCTCCTTCCGCTCCACTCGTA CAAAAGCCCGGTCTGCAAAAGCGGGATTTCTCACTGCCAGAACAACGGCCTACGCACACACATGAACGAACGTAT TCTACCGACGGGTCTGATGTAGATGTAGGTACAGATTGGGTGCAGAGAGAAAGGGCGCACAGGCCACAGTTGAAC GGCTTGACAAATGGCAGTCTTCCTGGTAATTTGGGTTTTCAAGGCGGACGTCACAGTCCCCCAACGGCGTATGCA TCGTTACCAGCAACCCCGCGCCTAGAGTCGTTCGAAGACAAAGCAGACCCTCCTTCACTGAAGATGCCTCTCTCG GCGAGCCTACAAGTGCCAATATTAGACCCACCTACCTCGCGGCGCCAACATGCCAGAGAAGATAGTAAAGTGTAT GGACCTCCACCTTTCTCAATATGGGATTACCTCCGGGAAGAACTTTTGGCGACGGATTTCGATTCGCACCAAGAG TTGAAGTGGGAACGTGTCAGCAATTTCCTAAACATACCTGTGGCCGTGGAAAAAATCATTGGCTTTGGTTTTTTC CTATGCTTGGATAGTTTCTTGTACACCTTTACCGTTCTTCCCATCCGTTTCAGTCTCGCCTTCATCCGCCTCATT GTTAATTTATTCCGGAGATCTGCATCTCCCCTTCCCCCATCGCAGAAAGCCGATCTGCTCAGAGCGTTATTACTC GTCATCTCGGTAATTGTGCTGGTACCGATGACAGATGCGAGCAAAATTTATCACAAAATTCGTGGTCAGGATACT ATTAAGTTATATGTTATATTCAATGCACTAGAGATTGCGGATAGGCTCTGCTCCTCCATAGGCCAGGATATCCTT GATTGTTTGTTCTCGCGCTCGACGCTCGTACCACTTTCTCATAAAATTCCTGTCACGGCGAATACGCTCACACCT TTCCTGTACTTCTTTCTTGCGCTTGCATACGTTTTGTCTCACACTCTAGTCATGGTATATCAACTGATCTCTCTC AATGTTGCCATCAATTCGTATGAATACGCTCTATTGACGCTTCTTGTATCCAACCAATTCGTCGAGATCAAGGGC AGTGTCTTCAAGAAGTTTGAAAAAGATACCCTTTTCCAGATAACGTGTGCTGATGTCGTTGAACGGTTCAACCTT GCTTTAATGCTTGCAGTCGTAGCATTCAGAAATCTCATAGAGCTCAGTGGCTCCGATTTTGATTTTGCTGGAGGT TATGTTCTACCCAAGAGTTTCGGTTGGTTCAGGGGAAACAACGTTCTGTGGACCATATCTTATCCCGTGCTCACT GTGCTGTGCTCTGAAATGCTTGTCGACTGGTTGAAGCACGCCTTCATTACGAAGTTCAACCACATTCGGCCGTCA GTTTATGAGCGCTATACAGACGTCTTGTGTCTCGACCTAGCTAGTGCTAGTGCTGTCAATAGAAAAGGCGCCAGA AAGCACTCGTATGCTGACCAAGCCCCACTCGTGGCCCGCCGGCTTGGATTTGCTTCGTTACCCCTTGCAGTTATG GTGATCCTTCTGGGATCTCAGTCGATTAGTCTATTGTTTTCCGATCTCCAACCTCTACCATATTCCTTCTGGAAT CTGCTGTCAATCTATAATCTCGATCTCAACACCCTTTCGCTATCGCTCCGAAGCGCTGAGGTAGTCAAGTACATA ACTCTGGGTGTAATGGGCGTGTTGTTTTGGTTGTGTTTTGTGGTCATCAAGGTCATTATTGGCGTGAATTTACTA ACTTATGCCACCCGAAGGCAGGCTGGTATGGATGAACGGGAAGCAATGGACATTGTTAATAATTTCGGTCGCGAT CCCATAGGGGAAGGGAATGATGAACGAAAATACAATAAGAATCTGAAGAAGTATTTGGATGACGACGAAGACGAT GCTCCACGGCTGCCGGACATGGGCGAAATTCGGCCAGGTCAAGAGATGAATAAGAAGGAAAGAGTGAAATTAGAG GATCTGACGAGGTTTACGATGGTGAAGCGAATTTATTAG |
| Gene | >Agabi119p4|040570 ATGACGACATCTCCGCCCCAAAAGCCCAAGAAATTGCATCGACGCTTTTCCTCTGGCAGCCACGACATTCTTACG ATTATAACTAATCAAGGCCAATCCAGGACCCGGGACAAACCTGCTCTCCAAACTTCTCCTTCCGCTCCACTCGTA CAAAAGCCCGGTCTGCAAAAGCGGGATTTCTCACTGCCAGAACAACGGCCTACGCACACACATGAACGAACGTAT TCTACCGACGGGTCTGATGTAGATGTAGGTACAGATTGGGTGCAGAGAGAAAGGGCGCACAGGCCACAGTTGAAC GGCTTGACAAATGGCAGTCTTCCTGGTAATTTGGGTTTTCAAGGCGGACGTCACAGTCCCCCAACGGCGTATGCA TCGTTACCAGCAACCCCGCGCCTAGAGTCGTTCGAAGACAAAGCAGACCCTCCTTCACTGAAGATGCCTCTCTCG GCGAGCCTACAAGTGCCAATATTAGACCCACCTACCTCGCGGCGCCAACATGCCAGAGAAGATAGTAAAGTGTAT GGACCTCCACCTTTCTCAATATGGGATTACCTCCGGGAAGAACTTTTGGCGACGGATTTCGATTCGCACCAAGAG TTGAAGTGGGAACGTGTCAGCAATTTCCTAAACATACCTGTGGCCGTGGAAAAAGTATGTTGACCCAAATCACAT ATTCAATCAGCCGTTTCTTGACCACGGTGCTTAGATCATTGGCTTTGGTTTTTTCCTATGCTTGGATAGTTTCTT GTACACCTTTACCGTTCTTCCCATCCGTTTCAGTCTCGCCTTCATCCGCCTCATTGTTAATTTATTCCGGAGATC TGCATCTCCCCTTCCCCCATCGCAGAAAGCCGATCTGCTCAGAGCGTTATTACTCGTCATCTCGGTAATTGTGCT GGTACCGATGACAGATGCGAGCAAAATTTATCACAAAATTCGTGGTCAGGATACTATTAAGTTATATGTTATATT CAATGCACTAGAGGTGAGTTTGGACGTCATTCCCATCCAACTTTTGATTGACTGGATCTTGAGATTGCGGATAGG CTCTGCTCCTCCATAGGCCAGGATATCCTTGATTGTTTGTTCTCGCGCTCGACGCTCGTACCACTTTCTCATAAA ATTCCTGTCACGGCGAATACGCTCACACCTTTCCTGTACTTCTTTCTTGCGCTTGCATACGTTTGTGGGTCGAGC GCTTTATTTTTTGATCCAATTTGCTGACTCTATTTAGTGTCTCACACTCTAGTCATGGTATATCAACTGATCTCT CTCAATGTTGCCATCAATTCGTATGAATACGCTCTATTGACGCTTCTTGTATCCAACCAATTCGTCGAGATCAAG GGCAGTGTCTTCAAGAAGTTTGAAAAAGATACCCTTTTCCAGATAACGTGTGCTGGTAAGGATGAACAGTTTTTC ACAAGCTCATACTCAAGTGACTTTCTTTAGATGTCGTTGAACGGTTCAACCTTGCTTTAATGCTTGCAGTCGTAG CATTCAGAAATCTCATAGAGCTCAGTGGCTCCGATTTTGATTTTGCTGGAGGTTATGTTCTACCCAAGAGTTTCG GTTGGTTCAGGGGAAACAACGTTCTGTGGACCATATCTTATGTGAGTGATCAAATTTCCCGCCTTTGTACAGTTC TCTACCATTTTATTACAGCCCGTGCTCACTGTGCTGTGCTCTGAAATGCTTGTCGACTGGTTGAAGCACGCCTTC ATTACGAAGTTCAACCACATTCGGCCGTCAGTTTATGAGCGCTATACAGACGTCTTGTGTCTCGACCTAGCTAGT GCTAGTGCTGTCAATAGAAAAGGCGCCAGAAAGGTGATTAAATATTTGCCACTTGTTAAACCCCAACTTATCGTA GATTTAGCACTCGTATGCTGACCAAGCCCCACTCGTGGCCCGCCGGCTTGGATTTGCTTCGTTACCCCTTGCAGT TATGGTGATCCTTCTGGGATCTCAGTCGATTAGTCTATTGTTTTCCGATCTCCAACCTCTACCATATTCCTTCTG GAATCTGCTGTCAATCTATAATCTCGATCTCAACACCCTTTCGCTATCGCTCCGAAGCGCTGAGGTAGTCAAGTA CATAACTCTGGGTGTAATGGGCGTGTTGTTTTGGTTGTGGTATGATCAGCACCTGTCCGATGTTATACCACTCAC TACTCTGTGATAGTTTTGTGGTCATCAAGGTCATTATTGGCGTGAATTTACTAACTTATGCCACCCGAAGGCAGG CTGGTATGGATGAACGGGAAGCAATGGACATTGTTAATAATTTCGGTCGCGATCCCATAGGGGAAGGGAATGATG AACGAGTGAGTGTTCTATGCTTTGGCCACGGCTTTCTATGCTGAAATTCTGTAGAAATACAATAAGAATCTGAAG AAGTATTTGGATGACGACGAAGACGATGCTCCACGGCTGCCGGACATGGGCGAAATTCGGCCAGGTCAAGAGATG AATAAGAAGGAAAGAGTGAAATTAGAGGATCTGACGAGGTTTACGATGGTGAAGCGAATTTATTAG |