Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|039650
Gene name
Locationscaffold_02:291182..293901
Strand-
Gene length (bp)2719
Transcript length (bp)1986
Coding sequence length (bp)1986
Protein length (aa) 662

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05653 Mg_trans_NIPA Magnesium transporter NIPA 6.3E-85 33 317
PF00892 EamA EamA-like transporter family 2.9E-07 80 145

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q94AH3|NIPA4_ARATH Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana GN=At1g71900 PE=2 SV=1 17 318 5.0E-69
sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1 34 318 1.0E-66
sp|B3LFA3|NIPA2_ARATH Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana GN=At4g13800 PE=2 SV=1 27 318 3.0E-66
sp|Q9LNK7|NIPA3_ARATH Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana GN=At1g34470 PE=2 SV=1 18 318 1.0E-65
sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1 34 318 9.0E-65
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Swissprot ID Swissprot Description Start End E-value
sp|Q94AH3|NIPA4_ARATH Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana GN=At1g71900 PE=2 SV=1 17 318 5.0E-69
sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1 34 318 1.0E-66
sp|B3LFA3|NIPA2_ARATH Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana GN=At4g13800 PE=2 SV=1 27 318 3.0E-66
sp|Q9LNK7|NIPA3_ARATH Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana GN=At1g34470 PE=2 SV=1 18 318 1.0E-65
sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1 34 318 9.0E-65
sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1 34 318 9.0E-65
sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1 34 318 2.0E-64
sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3 34 328 1.0E-63
sp|Q9LIR9|NIPA1_ARATH Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana GN=At3g23870 PE=2 SV=1 62 318 8.0E-63
sp|F4JKQ7|NIPA5_ARATH Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana GN=At4g09640 PE=2 SV=1 17 315 4.0E-62
sp|Q8GWX2|NIPA6_ARATH Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana GN=At2g21120 PE=2 SV=1 35 288 3.0E-61
sp|Q8GYS1|NIPA7_ARATH Probable magnesium transporter NIPA7 OS=Arabidopsis thaliana GN=At4g38730 PE=2 SV=1 34 356 4.0E-61
sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1 34 323 9.0E-61
sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2 20 318 2.0E-55
sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1 34 359 2.0E-48
sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1 34 359 4.0E-48
sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1 34 318 4.0E-40
sp|Q8BHK1|NIPA1_MOUSE Magnesium transporter NIPA1 OS=Mus musculus GN=Nipa1 PE=1 SV=1 34 318 1.0E-39
sp|Q9H841|NPAL2_HUMAN NIPA-like protein 2 OS=Homo sapiens GN=NIPAL2 PE=2 SV=1 11 288 4.0E-24
sp|Q91WC7|NPAL2_MOUSE NIPA-like protein 2 OS=Mus musculus GN=Nipal2 PE=2 SV=1 11 288 5.0E-21
sp|Q6P499|NPAL3_HUMAN NIPA-like protein 3 OS=Homo sapiens GN=NIPAL3 PE=1 SV=1 32 325 1.0E-19
sp|Q5RD30|NPAL3_PONAB NIPA-like protein 3 OS=Pongo abelii GN=NIPAL3 PE=2 SV=1 32 314 5.0E-18
sp|Q8BGN5|NPAL3_MOUSE NIPA-like protein 3 OS=Mus musculus GN=Nipal3 PE=2 SV=1 32 318 1.0E-13
sp|Q8RWF4|NIPA8_ARATH Probable magnesium transporter NIPA8 OS=Arabidopsis thaliana GN=At3g26670 PE=2 SV=1 78 325 2.0E-10
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GO

GO Term Description Terminal node
GO:0015095 magnesium ion transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0016021 integral component of membrane Yes
GO:0015693 magnesium ion transport Yes
GO:0022857 transmembrane transporter activity No
GO:0046873 metal ion transmembrane transporter activity No
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0006812 cation transport No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0030001 metal ion transport No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0031224 intrinsic component of membrane No
GO:0008324 cation transmembrane transporter activity No
GO:0006810 transport No
GO:0006811 ion transport No
GO:0051234 establishment of localization No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0015075 ion transmembrane transporter activity No
GO:0008150 biological_process No
GO:0051179 localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.5

Transmembrane Domains

Domain # Start End Length
1 33 52 19
2 75 97 22
3 101 123 22
4 130 149 19
5 164 186 22
6 198 220 22
7 235 257 22
8 270 287 17
9 292 314 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|039650
MSSSSPASSATSAAPAASSSIAGSFKAPANLKVVGIILAIVSGILIGSSFVFKKKGLLRSQAGGELGEGVAYLKS
ALWWTGMIMMILGEICNFAAYAFVEAIVVTPLGALSVVICAILSSFFLKEKLTFFGWLGCGLCLLGSTIIALNGP
HEDSVGQIREFQKLFLAPGFLAYAGVLIVVSLVIIFYFAPRYGKKNMLWYIGVCSMIGGISVSVTTGLGAAIVTT
AMGDNQFDYWFTYFLAAFIIITLITEVYYLNVALALFNTAMVTPTYYVIFTFCSIVTTIVLFKGLQASVLQIITL
VMAFLVICVGITILQMSKVDPNEFKKLDRRSTILLQAARSQTEPMDEKDIAALEAPGIDALRGSFGTFGSIARAK
RMSQRSSRMADLHPRPSGATARSGLPYSHDEPLRGMKRHQLYDAPVRKGSDTASLGAASITSLNKRPTVINFASQ
DVIHSYNPHGKKGVDQATHIHRAASGNVPIVYPPIPPPKSPRPEFPRVEIPKEDNLLEIETDSPETAVAVIGDDS
QIGVVPSHVDRSLPQEARSAPPTMYARFRSPPRATSNKDLRHIFNSSQSSTTLLTFPSVTDSARSEGWDEEELQR
RKQEAREKDRGRSARRYPRGDGEDDREESESLWIPIATEDSPTLEGGGIRLVQQSTRGDNS*
Coding >Agabi119p4|039650
ATGTCCTCCTCCTCCCCAGCGTCGTCCGCAACGTCGGCGGCGCCAGCTGCCTCCTCATCTATTGCCGGGTCATTC
AAGGCTCCGGCCAACCTCAAAGTTGTCGGCATTATCCTGGCCATTGTCAGCGGTATACTGATAGGATCCAGTTTT
GTATTCAAAAAGAAAGGGCTACTTCGCTCGCAGGCGGGCGGAGAGCTTGGTGAGGGTGTGGCGTATCTCAAATCG
GCACTATGGTGGACCGGCATGATCATGATGATACTGGGTGAAATATGTAATTTTGCCGCTTACGCATTTGTGGAA
GCTATTGTTGTAACACCACTCGGAGCGCTATCCGTCGTCATCTGCGCTATTCTTTCCTCATTCTTTCTGAAGGAA
AAACTTACGTTTTTTGGTTGGCTGGGCTGTGGGTTATGTCTTCTGGGTTCAACTATAATTGCGCTCAACGGCCCA
CATGAAGATTCTGTTGGACAGATCCGTGAATTTCAAAAGCTGTTTCTCGCACCGGGTTTTTTAGCATATGCTGGA
GTACTTATTGTAGTCTCCTTGGTTATCATATTTTATTTCGCCCCCAGATATGGAAAGAAGAACATGCTTTGGTAT
ATTGGCGTTTGTAGCATGATTGGCGGTATATCCGTTAGCGTCACCACTGGTCTTGGAGCAGCAATAGTCACCACG
GCGATGGGGGATAACCAGTTCGACTACTGGTTTACTTATTTCCTCGCAGCGTTTATTATCATTACCCTTATCACC
GAAGTATATTATTTAAATGTCGCTCTCGCTCTTTTTAACACCGCAATGGTGACACCTACATACTATGTTATTTTC
ACTTTCTGCTCCATTGTCACGACCATTGTATTATTTAAAGGCCTCCAGGCATCAGTCTTGCAAATCATCACCCTT
GTCATGGCATTCCTAGTGATCTGCGTCGGGATTACAATTCTCCAGATGTCCAAGGTCGACCCTAATGAGTTCAAA
AAGCTCGATCGACGCTCTACAATTCTTCTCCAAGCTGCTCGATCACAAACCGAACCTATGGACGAGAAAGACATC
GCTGCTTTGGAAGCCCCCGGAATCGACGCTCTTCGTGGCTCGTTTGGAACTTTTGGTAGTATAGCTCGGGCCAAG
AGGATGAGTCAAAGGAGTAGTCGTATGGCTGATTTACACCCCCGTCCATCTGGTGCTACTGCACGTAGTGGACTC
CCCTATTCACACGATGAACCCCTACGCGGAATGAAACGCCACCAACTTTATGATGCACCAGTTCGCAAAGGGAGC
GATACAGCTTCGCTAGGAGCCGCGTCGATAACGTCTTTAAACAAACGGCCTACTGTTATCAACTTTGCTAGTCAA
GACGTTATTCATTCCTATAACCCACACGGGAAGAAGGGTGTCGATCAAGCTACGCATATACATCGTGCTGCATCT
GGCAATGTACCCATCGTATACCCTCCTATACCTCCCCCCAAATCACCAAGACCAGAATTCCCGAGAGTAGAAATA
CCGAAAGAAGACAACCTTTTGGAGATAGAGACGGATAGTCCAGAAACGGCCGTTGCTGTCATTGGTGACGATAGT
CAAATAGGCGTTGTTCCATCCCACGTAGACCGAAGTCTGCCACAAGAGGCGCGAAGTGCCCCACCGACGATGTAT
GCTCGATTTAGGTCACCACCTCGGGCAACGTCAAATAAAGATCTACGACACATTTTCAACTCTTCGCAAAGCTCG
ACTACACTTTTAACTTTTCCTTCGGTGACGGATTCGGCGAGAAGTGAAGGATGGGATGAGGAGGAGCTGCAGAGA
CGGAAACAAGAGGCGAGGGAGAAGGATCGTGGAAGGTCGGCGAGGAGATATCCGAGGGGTGATGGTGAAGATGAT
AGAGAGGAGAGTGAATCGCTGTGGATACCTATCGCTACTGAAGATTCACCGACGTTGGAAGGGGGTGGAATTAGA
CTTGTACAACAGTCAACTCGGGGGGATAACTCGTGA
Transcript >Agabi119p4|039650
ATGTCCTCCTCCTCCCCAGCGTCGTCCGCAACGTCGGCGGCGCCAGCTGCCTCCTCATCTATTGCCGGGTCATTC
AAGGCTCCGGCCAACCTCAAAGTTGTCGGCATTATCCTGGCCATTGTCAGCGGTATACTGATAGGATCCAGTTTT
GTATTCAAAAAGAAAGGGCTACTTCGCTCGCAGGCGGGCGGAGAGCTTGGTGAGGGTGTGGCGTATCTCAAATCG
GCACTATGGTGGACCGGCATGATCATGATGATACTGGGTGAAATATGTAATTTTGCCGCTTACGCATTTGTGGAA
GCTATTGTTGTAACACCACTCGGAGCGCTATCCGTCGTCATCTGCGCTATTCTTTCCTCATTCTTTCTGAAGGAA
AAACTTACGTTTTTTGGTTGGCTGGGCTGTGGGTTATGTCTTCTGGGTTCAACTATAATTGCGCTCAACGGCCCA
CATGAAGATTCTGTTGGACAGATCCGTGAATTTCAAAAGCTGTTTCTCGCACCGGGTTTTTTAGCATATGCTGGA
GTACTTATTGTAGTCTCCTTGGTTATCATATTTTATTTCGCCCCCAGATATGGAAAGAAGAACATGCTTTGGTAT
ATTGGCGTTTGTAGCATGATTGGCGGTATATCCGTTAGCGTCACCACTGGTCTTGGAGCAGCAATAGTCACCACG
GCGATGGGGGATAACCAGTTCGACTACTGGTTTACTTATTTCCTCGCAGCGTTTATTATCATTACCCTTATCACC
GAAGTATATTATTTAAATGTCGCTCTCGCTCTTTTTAACACCGCAATGGTGACACCTACATACTATGTTATTTTC
ACTTTCTGCTCCATTGTCACGACCATTGTATTATTTAAAGGCCTCCAGGCATCAGTCTTGCAAATCATCACCCTT
GTCATGGCATTCCTAGTGATCTGCGTCGGGATTACAATTCTCCAGATGTCCAAGGTCGACCCTAATGAGTTCAAA
AAGCTCGATCGACGCTCTACAATTCTTCTCCAAGCTGCTCGATCACAAACCGAACCTATGGACGAGAAAGACATC
GCTGCTTTGGAAGCCCCCGGAATCGACGCTCTTCGTGGCTCGTTTGGAACTTTTGGTAGTATAGCTCGGGCCAAG
AGGATGAGTCAAAGGAGTAGTCGTATGGCTGATTTACACCCCCGTCCATCTGGTGCTACTGCACGTAGTGGACTC
CCCTATTCACACGATGAACCCCTACGCGGAATGAAACGCCACCAACTTTATGATGCACCAGTTCGCAAAGGGAGC
GATACAGCTTCGCTAGGAGCCGCGTCGATAACGTCTTTAAACAAACGGCCTACTGTTATCAACTTTGCTAGTCAA
GACGTTATTCATTCCTATAACCCACACGGGAAGAAGGGTGTCGATCAAGCTACGCATATACATCGTGCTGCATCT
GGCAATGTACCCATCGTATACCCTCCTATACCTCCCCCCAAATCACCAAGACCAGAATTCCCGAGAGTAGAAATA
CCGAAAGAAGACAACCTTTTGGAGATAGAGACGGATAGTCCAGAAACGGCCGTTGCTGTCATTGGTGACGATAGT
CAAATAGGCGTTGTTCCATCCCACGTAGACCGAAGTCTGCCACAAGAGGCGCGAAGTGCCCCACCGACGATGTAT
GCTCGATTTAGGTCACCACCTCGGGCAACGTCAAATAAAGATCTACGACACATTTTCAACTCTTCGCAAAGCTCG
ACTACACTTTTAACTTTTCCTTCGGTGACGGATTCGGCGAGAAGTGAAGGATGGGATGAGGAGGAGCTGCAGAGA
CGGAAACAAGAGGCGAGGGAGAAGGATCGTGGAAGGTCGGCGAGGAGATATCCGAGGGGTGATGGTGAAGATGAT
AGAGAGGAGAGTGAATCGCTGTGGATACCTATCGCTACTGAAGATTCACCGACGTTGGAAGGGGGTGGAATTAGA
CTTGTACAACAGTCAACTCGGGGGGATAACTCGTGA
Gene >Agabi119p4|039650
ATGTCCTCCTCCTCCCCAGCGTCGTCCGCAACGTCGGCGGCGCCAGCTGCCTCCTCATCTATTGCCGGGTCATTC
AAGGCTCCGGCCAACCTCAAAGTCCGATTTTTTTTCTCATTTGTTTTTTTGCTTCCACTTACAAAATGTATAGGT
TGTCGGCATTATCCTGGCCATTGTCAGCGGTATACTGATAGGATCCAGTTTTGTATTCAAAAAGAAAGGGCTACT
TCGCTCGCAGGCGGGCGGAGAGCTTGGTGAGGGTGTGGCGTATCTCAAATCGGTACGTCCCTGCTCGTCTGACTT
TAGGTGGCATCGGTCTTGACCATGATCCTCAGGCACTATGGTGGACCGGCATGATCAGTGTGTCTTCTCATCGTC
ATCATATTCCTCTTGAAGGTGCCTGATATCATTACAGTGATGATACTGGGTGAAATATGTAATTTTGCCGGTCTG
TCCCTGTCCCGCAGCATCTTCATAGGCAATCTCCTAACTCCCTATACATGCAGCTTACGCATTTGTGGAAGCTAT
TGTTGTAGTGAGTATGCTCCGCAGCACGCTACCCACTCCCCTAAGCTTCATCAACGCAGACACCACTCGGAGCGC
TATCCGTCGTCATCTGCGCTATTCTTTCCTCATTCTTTCTGAAGGAAAAACTTACGTTTTTTGGTTGGCTGGGCT
GTGGGTTATGTCTTGTGCGTGGCGTTACCCCTCTTTTCCCCCACCTACTTACCCTGCCCTGTAGCTGGGTTCAAC
TATAATTGCGCTCAACGGTTCGACTCATCGCAAAATATCAAACGCGGCCTTGACTCACCGTACACTTGTCTCTAG
GCCCACATGAAGATTCTGTTGGACAGATCCGTGAATTTCAAAAGCTGTTTCTCGCACCGGGTTTTTTAGCATATG
CTGGAGTACTTATTGTAGTCTCCTTGGTTATCATATTTTATTTCGCCCCCAGGTAAAGAACAATTGTATTCGTGA
CGCAGGGATACTCAAAGTGGCTTTCAGATATGGAAAGAAGAACATGCTTTGGTATATTGGCGTTTGTAGCATGAT
TGGCGGTATATCCGTTAGCGTCACCACTGGTCTTGGAGCAGCAATAGTCACCACGGCGATGGGGGATAACCAGGT
GCGTATCATTATGTCTCATTGAAAACCCTGTGATTGACATAGCGTCAAGTTCGACTACTGGTTTACTTATTTCCT
CGCAGCGTTTATTATCATTACCCTTAGTAGGTGCCGCGCTCTACAACACGACTTAAACTCATGCCGCCACAGTCA
CCGAAGTATATTATTTAAATGTCGCTCTCGCTCTTTTTAACACCGGTACGTCCTTCTTCATTGTTGTGTCAGTTC
AATTTCTTAATCCGTACTTTTGTAGCAATGGGTAAGAACGATTGATTATATCGAACTACGCACTATTGACCATAA
CTCAGTGACACCTACATACTATGTTATTTGTAAGTTGTTTCCATCAGAATCATTAAAAAACGGTCGCTCACCTCC
TTCCAGTCACTTTCTGCTCCATTGTCACGACCATTGTGAGTCGAACAAAAAAGCGGAGCTCATAATATTGAATTG
GAAACATTAGGTATTATTTAAAGGCCTCCAGGCATCAGTCTTGCAAATCATCACCCTTGTCATGGCATTCCTAGT
GATCTGCGTCGGGATTACAATTCTCCAGATGTCCAAGGTCGACCCTAATGAGTTCAAAAAGCTCGATCGACGCTC
TACAATTCTTCTCCAAGCTGCTCGATCACAAACCGAACCTATGGACGAGAAAGACATCGCTGCTTTGGAAGCCCC
CGGAATCGACGCTCTTCGTGGCTCGTTTGGAACTTTTGGTAGTATAGCTCGGGCCAAGAGGATGAGTCAAAGGAG
TAGTCGTATGGCTGATTTACACCCCCGTCCATCTGGTGCTACTGCACGTAGTGGACTCCCCTATTCACACGATGA
ACCCCTACGCGGAATGAAACGCCACCAACTTTATGATGCACCAGTTCGCAAAGGGAGCGATACAGCTTCGCTAGG
AGCCGCGTCGATAACGTCTTTAAACAAACGGCCTACTGTTATCAACTTTGCTAGTCAAGACGTTATTCATTCCTA
TAACCCACACGGGAAGAAGGGTGTCGATCAAGCTACGCATATACATCGTGCTGCATCTGGCAATGTACCCATCGT
ATACCCTCCTATACCTCCCCCCAAATCACCAAGACCAGAATTCCCGAGAGTAGAAATACCGAAAGAAGACAACCT
TTTGGAGATAGAGACGGATAGTCCAGAAACGGCCGTTGCTGTCATTGGTGACGATAGTCAAATAGGCGTTGTTCC
ATCCCACGTAGACCGAAGTCTGCCACAAGAGGCGCGAAGTGCCCCACCGACGATGTATGCTCGATTTAGGTCACC
ACCTCGGGCAACGTCAAATAAAGATCTACGACACATTTTCAACTCTTCGCAAAGCTCGACTACACTTTTAACTTT
TCCTTCGGTGACGGATTCGGCGAGAAGTGAAGGATGGGATGAGGAGGAGCTGCAGAGACGGAAACAAGAGGCGAG
GGAGAAGGATCGTGGAAGGTCGGCGAGGAGATATCCGAGGGGTGATGGTGAAGATGATAGAGAGGAGAGTGAATC
GCTGTGGATACCTATCGCTACTGAAGATTCACCGACGTTGGAAGGGGGTGGAATTAGACTTGTACAACAGTCAAC
TCGGGGGGATAACTCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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