Protein ID | Agabi119p4|039650 |
Gene name | |
Location | scaffold_02:291182..293901 |
Strand | - |
Gene length (bp) | 2719 |
Transcript length (bp) | 1986 |
Coding sequence length (bp) | 1986 |
Protein length (aa) | 662 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05653 | Mg_trans_NIPA | Magnesium transporter NIPA | 6.3E-85 | 33 | 317 |
PF00892 | EamA | EamA-like transporter family | 2.9E-07 | 80 | 145 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q94AH3|NIPA4_ARATH | Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana GN=At1g71900 PE=2 SV=1 | 17 | 318 | 5.0E-69 |
sp|Q3SWX0|NIPA2_BOVIN | Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1 | 34 | 318 | 1.0E-66 |
sp|B3LFA3|NIPA2_ARATH | Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana GN=At4g13800 PE=2 SV=1 | 27 | 318 | 3.0E-66 |
sp|Q9LNK7|NIPA3_ARATH | Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana GN=At1g34470 PE=2 SV=1 | 18 | 318 | 1.0E-65 |
sp|Q5R7Q3|NIPA2_PONAB | Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1 | 34 | 318 | 9.0E-65 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q94AH3|NIPA4_ARATH | Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana GN=At1g71900 PE=2 SV=1 | 17 | 318 | 5.0E-69 |
sp|Q3SWX0|NIPA2_BOVIN | Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1 | 34 | 318 | 1.0E-66 |
sp|B3LFA3|NIPA2_ARATH | Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana GN=At4g13800 PE=2 SV=1 | 27 | 318 | 3.0E-66 |
sp|Q9LNK7|NIPA3_ARATH | Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana GN=At1g34470 PE=2 SV=1 | 18 | 318 | 1.0E-65 |
sp|Q5R7Q3|NIPA2_PONAB | Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1 | 34 | 318 | 9.0E-65 |
sp|Q8N8Q9|NIPA2_HUMAN | Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1 | 34 | 318 | 9.0E-65 |
sp|Q9JJC8|NIPA2_MOUSE | Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1 | 34 | 318 | 2.0E-64 |
sp|Q0D2K0|NIPA4_HUMAN | Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3 | 34 | 328 | 1.0E-63 |
sp|Q9LIR9|NIPA1_ARATH | Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana GN=At3g23870 PE=2 SV=1 | 62 | 318 | 8.0E-63 |
sp|F4JKQ7|NIPA5_ARATH | Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana GN=At4g09640 PE=2 SV=1 | 17 | 315 | 4.0E-62 |
sp|Q8GWX2|NIPA6_ARATH | Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana GN=At2g21120 PE=2 SV=1 | 35 | 288 | 3.0E-61 |
sp|Q8GYS1|NIPA7_ARATH | Probable magnesium transporter NIPA7 OS=Arabidopsis thaliana GN=At4g38730 PE=2 SV=1 | 34 | 356 | 4.0E-61 |
sp|Q8BZF2|NIPA4_MOUSE | Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1 | 34 | 323 | 9.0E-61 |
sp|Q8BMW7|NIPA3_MOUSE | Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2 | 20 | 318 | 2.0E-55 |
sp|Q5RDB8|NIPA3_PONAB | Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1 | 34 | 359 | 2.0E-48 |
sp|Q6NVV3|NIPA3_HUMAN | Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1 | 34 | 359 | 4.0E-48 |
sp|Q7RTP0|NIPA1_HUMAN | Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1 | 34 | 318 | 4.0E-40 |
sp|Q8BHK1|NIPA1_MOUSE | Magnesium transporter NIPA1 OS=Mus musculus GN=Nipa1 PE=1 SV=1 | 34 | 318 | 1.0E-39 |
sp|Q9H841|NPAL2_HUMAN | NIPA-like protein 2 OS=Homo sapiens GN=NIPAL2 PE=2 SV=1 | 11 | 288 | 4.0E-24 |
sp|Q91WC7|NPAL2_MOUSE | NIPA-like protein 2 OS=Mus musculus GN=Nipal2 PE=2 SV=1 | 11 | 288 | 5.0E-21 |
sp|Q6P499|NPAL3_HUMAN | NIPA-like protein 3 OS=Homo sapiens GN=NIPAL3 PE=1 SV=1 | 32 | 325 | 1.0E-19 |
sp|Q5RD30|NPAL3_PONAB | NIPA-like protein 3 OS=Pongo abelii GN=NIPAL3 PE=2 SV=1 | 32 | 314 | 5.0E-18 |
sp|Q8BGN5|NPAL3_MOUSE | NIPA-like protein 3 OS=Mus musculus GN=Nipal3 PE=2 SV=1 | 32 | 318 | 1.0E-13 |
sp|Q8RWF4|NIPA8_ARATH | Probable magnesium transporter NIPA8 OS=Arabidopsis thaliana GN=At3g26670 PE=2 SV=1 | 78 | 325 | 2.0E-10 |
GO Term | Description | Terminal node |
---|---|---|
GO:0015095 | magnesium ion transmembrane transporter activity | Yes |
GO:0016020 | membrane | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0015693 | magnesium ion transport | Yes |
GO:0022857 | transmembrane transporter activity | No |
GO:0046873 | metal ion transmembrane transporter activity | No |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0006812 | cation transport | No |
GO:0022890 | inorganic cation transmembrane transporter activity | No |
GO:0030001 | metal ion transport | No |
GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0008324 | cation transmembrane transporter activity | No |
GO:0006810 | transport | No |
GO:0006811 | ion transport | No |
GO:0051234 | establishment of localization | No |
GO:0005215 | transporter activity | No |
GO:0110165 | cellular anatomical entity | No |
GO:0015075 | ion transmembrane transporter activity | No |
GO:0008150 | biological_process | No |
GO:0051179 | localization | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 34 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 33 | 52 | 19 |
2 | 75 | 97 | 22 |
3 | 101 | 123 | 22 |
4 | 130 | 149 | 19 |
5 | 164 | 186 | 22 |
6 | 198 | 220 | 22 |
7 | 235 | 257 | 22 |
8 | 270 | 287 | 17 |
9 | 292 | 314 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Agabi119p4|039650 MSSSSPASSATSAAPAASSSIAGSFKAPANLKVVGIILAIVSGILIGSSFVFKKKGLLRSQAGGELGEGVAYLKS ALWWTGMIMMILGEICNFAAYAFVEAIVVTPLGALSVVICAILSSFFLKEKLTFFGWLGCGLCLLGSTIIALNGP HEDSVGQIREFQKLFLAPGFLAYAGVLIVVSLVIIFYFAPRYGKKNMLWYIGVCSMIGGISVSVTTGLGAAIVTT AMGDNQFDYWFTYFLAAFIIITLITEVYYLNVALALFNTAMVTPTYYVIFTFCSIVTTIVLFKGLQASVLQIITL VMAFLVICVGITILQMSKVDPNEFKKLDRRSTILLQAARSQTEPMDEKDIAALEAPGIDALRGSFGTFGSIARAK RMSQRSSRMADLHPRPSGATARSGLPYSHDEPLRGMKRHQLYDAPVRKGSDTASLGAASITSLNKRPTVINFASQ DVIHSYNPHGKKGVDQATHIHRAASGNVPIVYPPIPPPKSPRPEFPRVEIPKEDNLLEIETDSPETAVAVIGDDS QIGVVPSHVDRSLPQEARSAPPTMYARFRSPPRATSNKDLRHIFNSSQSSTTLLTFPSVTDSARSEGWDEEELQR RKQEAREKDRGRSARRYPRGDGEDDREESESLWIPIATEDSPTLEGGGIRLVQQSTRGDNS* |
Coding | >Agabi119p4|039650 ATGTCCTCCTCCTCCCCAGCGTCGTCCGCAACGTCGGCGGCGCCAGCTGCCTCCTCATCTATTGCCGGGTCATTC AAGGCTCCGGCCAACCTCAAAGTTGTCGGCATTATCCTGGCCATTGTCAGCGGTATACTGATAGGATCCAGTTTT GTATTCAAAAAGAAAGGGCTACTTCGCTCGCAGGCGGGCGGAGAGCTTGGTGAGGGTGTGGCGTATCTCAAATCG GCACTATGGTGGACCGGCATGATCATGATGATACTGGGTGAAATATGTAATTTTGCCGCTTACGCATTTGTGGAA GCTATTGTTGTAACACCACTCGGAGCGCTATCCGTCGTCATCTGCGCTATTCTTTCCTCATTCTTTCTGAAGGAA AAACTTACGTTTTTTGGTTGGCTGGGCTGTGGGTTATGTCTTCTGGGTTCAACTATAATTGCGCTCAACGGCCCA CATGAAGATTCTGTTGGACAGATCCGTGAATTTCAAAAGCTGTTTCTCGCACCGGGTTTTTTAGCATATGCTGGA GTACTTATTGTAGTCTCCTTGGTTATCATATTTTATTTCGCCCCCAGATATGGAAAGAAGAACATGCTTTGGTAT ATTGGCGTTTGTAGCATGATTGGCGGTATATCCGTTAGCGTCACCACTGGTCTTGGAGCAGCAATAGTCACCACG GCGATGGGGGATAACCAGTTCGACTACTGGTTTACTTATTTCCTCGCAGCGTTTATTATCATTACCCTTATCACC GAAGTATATTATTTAAATGTCGCTCTCGCTCTTTTTAACACCGCAATGGTGACACCTACATACTATGTTATTTTC ACTTTCTGCTCCATTGTCACGACCATTGTATTATTTAAAGGCCTCCAGGCATCAGTCTTGCAAATCATCACCCTT GTCATGGCATTCCTAGTGATCTGCGTCGGGATTACAATTCTCCAGATGTCCAAGGTCGACCCTAATGAGTTCAAA AAGCTCGATCGACGCTCTACAATTCTTCTCCAAGCTGCTCGATCACAAACCGAACCTATGGACGAGAAAGACATC GCTGCTTTGGAAGCCCCCGGAATCGACGCTCTTCGTGGCTCGTTTGGAACTTTTGGTAGTATAGCTCGGGCCAAG AGGATGAGTCAAAGGAGTAGTCGTATGGCTGATTTACACCCCCGTCCATCTGGTGCTACTGCACGTAGTGGACTC CCCTATTCACACGATGAACCCCTACGCGGAATGAAACGCCACCAACTTTATGATGCACCAGTTCGCAAAGGGAGC GATACAGCTTCGCTAGGAGCCGCGTCGATAACGTCTTTAAACAAACGGCCTACTGTTATCAACTTTGCTAGTCAA GACGTTATTCATTCCTATAACCCACACGGGAAGAAGGGTGTCGATCAAGCTACGCATATACATCGTGCTGCATCT GGCAATGTACCCATCGTATACCCTCCTATACCTCCCCCCAAATCACCAAGACCAGAATTCCCGAGAGTAGAAATA CCGAAAGAAGACAACCTTTTGGAGATAGAGACGGATAGTCCAGAAACGGCCGTTGCTGTCATTGGTGACGATAGT CAAATAGGCGTTGTTCCATCCCACGTAGACCGAAGTCTGCCACAAGAGGCGCGAAGTGCCCCACCGACGATGTAT GCTCGATTTAGGTCACCACCTCGGGCAACGTCAAATAAAGATCTACGACACATTTTCAACTCTTCGCAAAGCTCG ACTACACTTTTAACTTTTCCTTCGGTGACGGATTCGGCGAGAAGTGAAGGATGGGATGAGGAGGAGCTGCAGAGA CGGAAACAAGAGGCGAGGGAGAAGGATCGTGGAAGGTCGGCGAGGAGATATCCGAGGGGTGATGGTGAAGATGAT AGAGAGGAGAGTGAATCGCTGTGGATACCTATCGCTACTGAAGATTCACCGACGTTGGAAGGGGGTGGAATTAGA CTTGTACAACAGTCAACTCGGGGGGATAACTCGTGA |
Transcript | >Agabi119p4|039650 ATGTCCTCCTCCTCCCCAGCGTCGTCCGCAACGTCGGCGGCGCCAGCTGCCTCCTCATCTATTGCCGGGTCATTC AAGGCTCCGGCCAACCTCAAAGTTGTCGGCATTATCCTGGCCATTGTCAGCGGTATACTGATAGGATCCAGTTTT GTATTCAAAAAGAAAGGGCTACTTCGCTCGCAGGCGGGCGGAGAGCTTGGTGAGGGTGTGGCGTATCTCAAATCG GCACTATGGTGGACCGGCATGATCATGATGATACTGGGTGAAATATGTAATTTTGCCGCTTACGCATTTGTGGAA GCTATTGTTGTAACACCACTCGGAGCGCTATCCGTCGTCATCTGCGCTATTCTTTCCTCATTCTTTCTGAAGGAA AAACTTACGTTTTTTGGTTGGCTGGGCTGTGGGTTATGTCTTCTGGGTTCAACTATAATTGCGCTCAACGGCCCA CATGAAGATTCTGTTGGACAGATCCGTGAATTTCAAAAGCTGTTTCTCGCACCGGGTTTTTTAGCATATGCTGGA GTACTTATTGTAGTCTCCTTGGTTATCATATTTTATTTCGCCCCCAGATATGGAAAGAAGAACATGCTTTGGTAT ATTGGCGTTTGTAGCATGATTGGCGGTATATCCGTTAGCGTCACCACTGGTCTTGGAGCAGCAATAGTCACCACG GCGATGGGGGATAACCAGTTCGACTACTGGTTTACTTATTTCCTCGCAGCGTTTATTATCATTACCCTTATCACC GAAGTATATTATTTAAATGTCGCTCTCGCTCTTTTTAACACCGCAATGGTGACACCTACATACTATGTTATTTTC ACTTTCTGCTCCATTGTCACGACCATTGTATTATTTAAAGGCCTCCAGGCATCAGTCTTGCAAATCATCACCCTT GTCATGGCATTCCTAGTGATCTGCGTCGGGATTACAATTCTCCAGATGTCCAAGGTCGACCCTAATGAGTTCAAA AAGCTCGATCGACGCTCTACAATTCTTCTCCAAGCTGCTCGATCACAAACCGAACCTATGGACGAGAAAGACATC GCTGCTTTGGAAGCCCCCGGAATCGACGCTCTTCGTGGCTCGTTTGGAACTTTTGGTAGTATAGCTCGGGCCAAG AGGATGAGTCAAAGGAGTAGTCGTATGGCTGATTTACACCCCCGTCCATCTGGTGCTACTGCACGTAGTGGACTC CCCTATTCACACGATGAACCCCTACGCGGAATGAAACGCCACCAACTTTATGATGCACCAGTTCGCAAAGGGAGC GATACAGCTTCGCTAGGAGCCGCGTCGATAACGTCTTTAAACAAACGGCCTACTGTTATCAACTTTGCTAGTCAA GACGTTATTCATTCCTATAACCCACACGGGAAGAAGGGTGTCGATCAAGCTACGCATATACATCGTGCTGCATCT GGCAATGTACCCATCGTATACCCTCCTATACCTCCCCCCAAATCACCAAGACCAGAATTCCCGAGAGTAGAAATA CCGAAAGAAGACAACCTTTTGGAGATAGAGACGGATAGTCCAGAAACGGCCGTTGCTGTCATTGGTGACGATAGT CAAATAGGCGTTGTTCCATCCCACGTAGACCGAAGTCTGCCACAAGAGGCGCGAAGTGCCCCACCGACGATGTAT GCTCGATTTAGGTCACCACCTCGGGCAACGTCAAATAAAGATCTACGACACATTTTCAACTCTTCGCAAAGCTCG ACTACACTTTTAACTTTTCCTTCGGTGACGGATTCGGCGAGAAGTGAAGGATGGGATGAGGAGGAGCTGCAGAGA CGGAAACAAGAGGCGAGGGAGAAGGATCGTGGAAGGTCGGCGAGGAGATATCCGAGGGGTGATGGTGAAGATGAT AGAGAGGAGAGTGAATCGCTGTGGATACCTATCGCTACTGAAGATTCACCGACGTTGGAAGGGGGTGGAATTAGA CTTGTACAACAGTCAACTCGGGGGGATAACTCGTGA |
Gene | >Agabi119p4|039650 ATGTCCTCCTCCTCCCCAGCGTCGTCCGCAACGTCGGCGGCGCCAGCTGCCTCCTCATCTATTGCCGGGTCATTC AAGGCTCCGGCCAACCTCAAAGTCCGATTTTTTTTCTCATTTGTTTTTTTGCTTCCACTTACAAAATGTATAGGT TGTCGGCATTATCCTGGCCATTGTCAGCGGTATACTGATAGGATCCAGTTTTGTATTCAAAAAGAAAGGGCTACT TCGCTCGCAGGCGGGCGGAGAGCTTGGTGAGGGTGTGGCGTATCTCAAATCGGTACGTCCCTGCTCGTCTGACTT TAGGTGGCATCGGTCTTGACCATGATCCTCAGGCACTATGGTGGACCGGCATGATCAGTGTGTCTTCTCATCGTC ATCATATTCCTCTTGAAGGTGCCTGATATCATTACAGTGATGATACTGGGTGAAATATGTAATTTTGCCGGTCTG TCCCTGTCCCGCAGCATCTTCATAGGCAATCTCCTAACTCCCTATACATGCAGCTTACGCATTTGTGGAAGCTAT TGTTGTAGTGAGTATGCTCCGCAGCACGCTACCCACTCCCCTAAGCTTCATCAACGCAGACACCACTCGGAGCGC TATCCGTCGTCATCTGCGCTATTCTTTCCTCATTCTTTCTGAAGGAAAAACTTACGTTTTTTGGTTGGCTGGGCT GTGGGTTATGTCTTGTGCGTGGCGTTACCCCTCTTTTCCCCCACCTACTTACCCTGCCCTGTAGCTGGGTTCAAC TATAATTGCGCTCAACGGTTCGACTCATCGCAAAATATCAAACGCGGCCTTGACTCACCGTACACTTGTCTCTAG GCCCACATGAAGATTCTGTTGGACAGATCCGTGAATTTCAAAAGCTGTTTCTCGCACCGGGTTTTTTAGCATATG CTGGAGTACTTATTGTAGTCTCCTTGGTTATCATATTTTATTTCGCCCCCAGGTAAAGAACAATTGTATTCGTGA CGCAGGGATACTCAAAGTGGCTTTCAGATATGGAAAGAAGAACATGCTTTGGTATATTGGCGTTTGTAGCATGAT TGGCGGTATATCCGTTAGCGTCACCACTGGTCTTGGAGCAGCAATAGTCACCACGGCGATGGGGGATAACCAGGT GCGTATCATTATGTCTCATTGAAAACCCTGTGATTGACATAGCGTCAAGTTCGACTACTGGTTTACTTATTTCCT CGCAGCGTTTATTATCATTACCCTTAGTAGGTGCCGCGCTCTACAACACGACTTAAACTCATGCCGCCACAGTCA CCGAAGTATATTATTTAAATGTCGCTCTCGCTCTTTTTAACACCGGTACGTCCTTCTTCATTGTTGTGTCAGTTC AATTTCTTAATCCGTACTTTTGTAGCAATGGGTAAGAACGATTGATTATATCGAACTACGCACTATTGACCATAA CTCAGTGACACCTACATACTATGTTATTTGTAAGTTGTTTCCATCAGAATCATTAAAAAACGGTCGCTCACCTCC TTCCAGTCACTTTCTGCTCCATTGTCACGACCATTGTGAGTCGAACAAAAAAGCGGAGCTCATAATATTGAATTG GAAACATTAGGTATTATTTAAAGGCCTCCAGGCATCAGTCTTGCAAATCATCACCCTTGTCATGGCATTCCTAGT GATCTGCGTCGGGATTACAATTCTCCAGATGTCCAAGGTCGACCCTAATGAGTTCAAAAAGCTCGATCGACGCTC TACAATTCTTCTCCAAGCTGCTCGATCACAAACCGAACCTATGGACGAGAAAGACATCGCTGCTTTGGAAGCCCC CGGAATCGACGCTCTTCGTGGCTCGTTTGGAACTTTTGGTAGTATAGCTCGGGCCAAGAGGATGAGTCAAAGGAG TAGTCGTATGGCTGATTTACACCCCCGTCCATCTGGTGCTACTGCACGTAGTGGACTCCCCTATTCACACGATGA ACCCCTACGCGGAATGAAACGCCACCAACTTTATGATGCACCAGTTCGCAAAGGGAGCGATACAGCTTCGCTAGG AGCCGCGTCGATAACGTCTTTAAACAAACGGCCTACTGTTATCAACTTTGCTAGTCAAGACGTTATTCATTCCTA TAACCCACACGGGAAGAAGGGTGTCGATCAAGCTACGCATATACATCGTGCTGCATCTGGCAATGTACCCATCGT ATACCCTCCTATACCTCCCCCCAAATCACCAAGACCAGAATTCCCGAGAGTAGAAATACCGAAAGAAGACAACCT TTTGGAGATAGAGACGGATAGTCCAGAAACGGCCGTTGCTGTCATTGGTGACGATAGTCAAATAGGCGTTGTTCC ATCCCACGTAGACCGAAGTCTGCCACAAGAGGCGCGAAGTGCCCCACCGACGATGTATGCTCGATTTAGGTCACC ACCTCGGGCAACGTCAAATAAAGATCTACGACACATTTTCAACTCTTCGCAAAGCTCGACTACACTTTTAACTTT TCCTTCGGTGACGGATTCGGCGAGAAGTGAAGGATGGGATGAGGAGGAGCTGCAGAGACGGAAACAAGAGGCGAG GGAGAAGGATCGTGGAAGGTCGGCGAGGAGATATCCGAGGGGTGATGGTGAAGATGATAGAGAGGAGAGTGAATC GCTGTGGATACCTATCGCTACTGAAGATTCACCGACGTTGGAAGGGGGTGGAATTAGACTTGTACAACAGTCAAC TCGGGGGGATAACTCGTGA |