Fungal Genomics

General Properties

Protein ID	Agabi119p4|038860
Gene name
Location	scaffold_02:88626..90271
Strand	+
Gene length (bp)	1645
Transcript length (bp)	1482
Coding sequence length (bp)	1482
Protein length (aa)	494

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	5.1E-06	13	54
PF00646	F-box	F-box domain	2.9E-05	13	51

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	208
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|038860
Agaricus bisporus var bisporus H39	AgabiH39|038870
Agaricus bisporus var bisporus H97	AgabiH97|038850
Agaricus bisporus var bisporus H97	AgabiH97|038860
Agaricus bisporus var bisporus H97	AgabiH97|038870
Agaricus bisporus var burnettii H119p4	Agabi119p4|038850
Agaricus bisporus var burnettii H119p4	Agabi119p4|038860 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|038860 MSRISQMATGLVSMPPEIVVEIFKQLHWKDLLAARQTCTLFHNISKSRDIWENLIQIHAAATHRPPTTLEKPIRM YTAGKLEEHFLRGARNESKWLDDIPFEERSIPSPHKFRHCHLLRGGRWFLCSATGGEVLYCDLESPGSGLVPLIP YPFPYPCDSITSMAIEEDNEAEILCFTIALVHILEEDWSYRSSGETAVTGDSRVDVWFGKVVLGEDGNATHLHAE KLASVPLPVYLGKPILGASLRGSLLAFTVEWESLDGFGTQCDAIILDWKAPPRTKHQLCIRKTVHFSITWASGVK TELMLLPGDHLLTVIRSMIRIYDHSLVPWASERRHWREALSLSEQCAHVINILPPFGPVPRDFSPIFSLSGDRYR VVFNCFRGIRGLTLQYKDGGLFKATLVDFLEWPRTIDAFIEDRQSHFSYNYGVTLGSYGSLFRSHFTWPDEEESP SNRLSAITGNLSCLPAVMDMDVNTGRVLWISNRGELKEASLTA*
Coding	>Agabi119p4|038860 ATGTCAAGAATTTCCCAAATGGCCACTGGGCTCGTCTCTATGCCACCCGAAATTGTCGTTGAGATCTTCAAGCAG TTACATTGGAAAGATCTACTGGCGGCGCGCCAGACCTGTACGCTCTTTCACAATATTTCTAAATCTAGGGATATA TGGGAGAACCTGATTCAAATTCACGCTGCTGCCACACATAGGCCCCCGACAACGTTAGAAAAACCGATACGTATG TATACTGCTGGCAAACTCGAGGAGCATTTCCTTCGTGGCGCACGAAATGAGTCCAAATGGCTGGACGATATTCCG TTTGAGGAACGGAGTATTCCGTCTCCTCACAAATTCCGACATTGTCATCTCCTTCGAGGCGGACGGTGGTTCCTC TGCTCCGCTACTGGAGGTGAGGTGCTCTATTGTGACCTCGAATCGCCTGGATCTGGATTAGTTCCCTTAATCCCA TATCCATTCCCATACCCATGCGACTCTATCACTTCAATGGCTATCGAAGAAGACAATGAGGCGGAAATTCTATGT TTTACTATCGCTCTAGTCCATATTTTGGAGGAAGATTGGTCATACAGATCGAGTGGCGAAACGGCTGTGACTGGA GACTCCAGGGTTGACGTGTGGTTTGGAAAGGTCGTTTTGGGTGAAGATGGGAATGCTACGCATTTGCACGCTGAG AAGCTTGCCTCCGTTCCCTTGCCTGTTTATCTTGGTAAACCAATATTGGGTGCATCTTTACGCGGCTCCCTGCTT GCTTTTACTGTTGAATGGGAATCTCTGGATGGATTTGGCACGCAATGCGATGCGATCATATTAGACTGGAAAGCG CCGCCGAGGACTAAACATCAACTCTGTATCCGCAAAACTGTCCATTTTTCTATCACTTGGGCTTCTGGCGTCAAG ACGGAATTGATGCTCCTCCCCGGAGATCACTTGCTTACCGTAATTCGATCGATGATCCGCATTTATGACCACTCC TTGGTTCCATGGGCCTCAGAGCGGCGGCACTGGCGTGAGGCACTTTCGCTATCTGAGCAATGTGCGCACGTTATC AATATACTCCCACCCTTTGGCCCCGTTCCTCGCGATTTCTCGCCAATTTTCTCCCTCTCTGGAGATCGATATCGT GTAGTGTTCAATTGCTTTCGTGGGATAAGGGGTTTGACGTTGCAATATAAAGACGGGGGCTTATTCAAAGCCACT TTAGTTGACTTTTTGGAATGGCCCAGAACGATAGATGCATTCATCGAGGATCGCCAGTCCCACTTCTCATATAAC TATGGCGTGACTCTTGGCAGCTATGGCTCTCTTTTTCGTTCTCATTTTACCTGGCCTGATGAGGAGGAGTCACCG TCAAACAGGCTCTCAGCTATCACGGGAAACCTGAGTTGCCTTCCTGCTGTCATGGACATGGATGTCAATACGGGG AGAGTGTTATGGATATCAAACCGAGGTGAACTGAAAGAGGCTTCGCTCACAGCTTGA
Transcript	>Agabi119p4|038860 ATGTCAAGAATTTCCCAAATGGCCACTGGGCTCGTCTCTATGCCACCCGAAATTGTCGTTGAGATCTTCAAGCAG TTACATTGGAAAGATCTACTGGCGGCGCGCCAGACCTGTACGCTCTTTCACAATATTTCTAAATCTAGGGATATA TGGGAGAACCTGATTCAAATTCACGCTGCTGCCACACATAGGCCCCCGACAACGTTAGAAAAACCGATACGTATG TATACTGCTGGCAAACTCGAGGAGCATTTCCTTCGTGGCGCACGAAATGAGTCCAAATGGCTGGACGATATTCCG TTTGAGGAACGGAGTATTCCGTCTCCTCACAAATTCCGACATTGTCATCTCCTTCGAGGCGGACGGTGGTTCCTC TGCTCCGCTACTGGAGGTGAGGTGCTCTATTGTGACCTCGAATCGCCTGGATCTGGATTAGTTCCCTTAATCCCA TATCCATTCCCATACCCATGCGACTCTATCACTTCAATGGCTATCGAAGAAGACAATGAGGCGGAAATTCTATGT TTTACTATCGCTCTAGTCCATATTTTGGAGGAAGATTGGTCATACAGATCGAGTGGCGAAACGGCTGTGACTGGA GACTCCAGGGTTGACGTGTGGTTTGGAAAGGTCGTTTTGGGTGAAGATGGGAATGCTACGCATTTGCACGCTGAG AAGCTTGCCTCCGTTCCCTTGCCTGTTTATCTTGGTAAACCAATATTGGGTGCATCTTTACGCGGCTCCCTGCTT GCTTTTACTGTTGAATGGGAATCTCTGGATGGATTTGGCACGCAATGCGATGCGATCATATTAGACTGGAAAGCG CCGCCGAGGACTAAACATCAACTCTGTATCCGCAAAACTGTCCATTTTTCTATCACTTGGGCTTCTGGCGTCAAG ACGGAATTGATGCTCCTCCCCGGAGATCACTTGCTTACCGTAATTCGATCGATGATCCGCATTTATGACCACTCC TTGGTTCCATGGGCCTCAGAGCGGCGGCACTGGCGTGAGGCACTTTCGCTATCTGAGCAATGTGCGCACGTTATC AATATACTCCCACCCTTTGGCCCCGTTCCTCGCGATTTCTCGCCAATTTTCTCCCTCTCTGGAGATCGATATCGT GTAGTGTTCAATTGCTTTCGTGGGATAAGGGGTTTGACGTTGCAATATAAAGACGGGGGCTTATTCAAAGCCACT TTAGTTGACTTTTTGGAATGGCCCAGAACGATAGATGCATTCATCGAGGATCGCCAGTCCCACTTCTCATATAAC TATGGCGTGACTCTTGGCAGCTATGGCTCTCTTTTTCGTTCTCATTTTACCTGGCCTGATGAGGAGGAGTCACCG TCAAACAGGCTCTCAGCTATCACGGGAAACCTGAGTTGCCTTCCTGCTGTCATGGACATGGATGTCAATACGGGG AGAGTGTTATGGATATCAAACCGAGGTGAACTGAAAGAGGCTTCGCTCACAGCTTGA
Gene	>Agabi119p4|038860 ATGTCAAGAATTTCCCAAATGGCCGTGAGTCTTTATGTGAAGAACTGCTAGACACCTCCTCACAGATAAACATAC AACTTTCGAAGACTGGGCTCGTCTCTATGCCACCCGAAATTGTCGTTGAGATCTTCAAGCAGTTACATTGGAAAG ATCTACTGGCGGCGCGCCAGGTGAGTGTAGACCGGCCATACTTCTTTCTATATACCATTCTAATCCTGTAGACCT GTACGCTCTTTCACAATATTTCTAAATCTAGGGATATATGGGAGAACCTGATTCAAATTCACGCTGCTGCCACAC ATAGGCCCCCGACAACGTTAGAAAAACCGATACGTATGTATACTGCTGGCAAACTCGAGGAGCATTTCCTTCGTG GCGCACGAAATGAGTCCAAATGGCTGGACGATATTCCGTTTGAGGAACGGAGTATTCCGTCTCCTCACAAATTCC GACATTGTCATCTCCTTCGAGGCGGACGGTGGTTCCTCTGCTCCGCTACTGGAGGTGAGGTGCTCTATTGTGACC TCGAATCGCCTGGATCTGGATTAGTTCCCTTAATCCCATATCCATTCCCATACCCATGCGACTCTATCACTTCAA TGGCTATCGAAGAAGACAATGAGGCGGAAATTCTATGTTTTACTATCGCTCTAGTCCATATTTTGGAGGAAGATT GGTCATACAGATCGAGTGGCGAAACGGCTGTGACTGGAGACTCCAGGGTTGACGTGTGGTTTGGAAAGGTCGTTT TGGGTGAAGATGGGAATGCTACGCATTTGCACGCTGAGAAGCTTGCCTCCGTTCCCTTGCCTGTTTATCTTGGTA AACCAATATTGGGTGCATCTTTACGCGGCTCCCTGCTTGCTTTTACTGTTGAATGGGAATCTCTGGATGGATTTG GCACGCAATGCGATGCGATCATATTAGACTGGAAAGCGCCGCCGAGGACTAAACATCAACTCTGTATCCGCAAAA CTGTCCATTTTTCTATCACTTGGGCTTCTGGCGTCAAGGTACGCTTGTTCATTGGGTTTGTGTACTACCATTAAA ACAGTTCTATTAGACGGAATTGATGCTCCTCCCCGGAGATCACTTGCTTACCGTAATTCGATCGATGATCCGCAT TTATGACCACTCCTTGGTTCCATGGGCCTCAGAGCGGCGGCACTGGCGTGAGGCACTTTCGCTATCTGAGCAATG TGCGCACGTTATCAATATACTCCCACCCTTTGGCCCCGTTCCTCGCGATTTCTCGCCAATTTTCTCCCTCTCTGG AGATCGATATCGTGTAGTGTTCAATTGCTTTCGTGGGATAAGGGGTTTGACGTTGCAATATAAAGACGGGGGCTT ATTCAAAGCCACTTTAGTTGACTTTTTGGAATGGCCCAGAACGATAGATGCATTCATCGAGGATCGCCAGTCCCA CTTCTCATATAACTATGGCGTGACTCTTGGCAGCTATGGCTCTCTTTTTCGTTCTCATTTTACCTGGCCTGATGA GGAGGAGTCACCGTCAAACAGGCTCTCAGCTATCACGGGAAACCTGAGTTGCCTTCCTGCTGTCATGGACATGGA TGTCAATACGGGGAGAGTGTTATGGATATCAAACCGAGGTGAACTGAAAGAGGCTTCGCTCACAGCTTGA