Fungal Genomics

General Properties

Protein ID	Agabi119p4|038480
Gene name
Location	scaffold_13:1301159..1301802
Strand	+
Gene length (bp)	643
Transcript length (bp)	588
Coding sequence length (bp)	588
Protein length (aa)	196

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10342	Kre9_KNH	Kre9/KNH-like N-terminal Ig-like domain	2.9E-05	33	120

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 26	0.874515

Transmembrane Domains

Domain #	Start	End	Length
1	7	29	22
2	169	191	22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	2962
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|038480
Agaricus bisporus var bisporus H97	AgabiH97|038480
Agaricus bisporus var burnettii H119p4	Agabi119p4|038480 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|038480 MPYSRPLYACTLISVFLFFITTSVSAYFLIDEPSTDTQWVNNEAYSMRWKKGRLDGIVTFDVEMARLNSDGLVLV AKNVPATQESLNIFVQDLPSGDDYFLVFINSTHGVMYATSPRFSILDSGSNPTNKGLEPDSTVPTVTVNGGPNPT KAFSTTFPALPQNGAVGIWPGSWELLIIGFTSLLCVLAGGVRTML*
Coding	>Agabi119p4|038480 ATGCCATACTCACGGCCGCTATACGCCTGCACTCTCATCTCTGTTTTTCTCTTTTTCATTACGACCTCGGTATCT GCCTATTTTCTCATTGACGAACCAAGCACCGATACTCAGTGGGTAAACAATGAGGCGTACTCGATGAGATGGAAG AAAGGGCGTTTGGATGGCATAGTCACCTTTGACGTTGAAATGGCGCGCTTGAACAGCGACGGACTAGTATTAGTC GCCAAAAACGTACCCGCTACGCAAGAATCCCTCAACATTTTCGTTCAAGACCTACCTTCGGGCGACGATTACTTC CTCGTGTTCATTAATTCAACCCACGGCGTCATGTATGCCACCTCACCCAGATTTTCCATTCTCGATTCAGGTAGT AATCCTACCAACAAAGGCCTTGAACCGGATAGTACAGTGCCTACTGTCACGGTCAACGGAGGGCCGAACCCTACA AAAGCCTTCTCAACGACGTTTCCCGCATTACCACAGAATGGTGCTGTAGGCATATGGCCGGGAAGCTGGGAACTA CTCATCATCGGCTTCACTTCACTTCTGTGTGTGCTGGCGGGTGGTGTACGGACAATGTTATGA
Transcript	>Agabi119p4|038480 ATGCCATACTCACGGCCGCTATACGCCTGCACTCTCATCTCTGTTTTTCTCTTTTTCATTACGACCTCGGTATCT GCCTATTTTCTCATTGACGAACCAAGCACCGATACTCAGTGGGTAAACAATGAGGCGTACTCGATGAGATGGAAG AAAGGGCGTTTGGATGGCATAGTCACCTTTGACGTTGAAATGGCGCGCTTGAACAGCGACGGACTAGTATTAGTC GCCAAAAACGTACCCGCTACGCAAGAATCCCTCAACATTTTCGTTCAAGACCTACCTTCGGGCGACGATTACTTC CTCGTGTTCATTAATTCAACCCACGGCGTCATGTATGCCACCTCACCCAGATTTTCCATTCTCGATTCAGGTAGT AATCCTACCAACAAAGGCCTTGAACCGGATAGTACAGTGCCTACTGTCACGGTCAACGGAGGGCCGAACCCTACA AAAGCCTTCTCAACGACGTTTCCCGCATTACCACAGAATGGTGCTGTAGGCATATGGCCGGGAAGCTGGGAACTA CTCATCATCGGCTTCACTTCACTTCTGTGTGTGCTGGCGGGTGGTGTACGGACAATGTTATGA
Gene	>Agabi119p4|038480 ATGCCATACTCACGGCCGCTATACGCCTGCACTCTCATCTCTGTTTTTCTCTTTTTCATTACGACCTCGGTATCT GGTACGCTGTCGTTGTGTCTGCCGTTTTTCAGCTACAAGTATTGATTCTCATCTAGCCTATTTTCTCATTGACGA ACCAAGCACCGATACTCAGTGGGTAAACAATGAGGCGTACTCGATGAGATGGAAGAAAGGGCGTTTGGATGGCAT AGTCACCTTTGACGTTGAAATGGCGCGCTTGAACAGCGACGGACTAGTATTAGTCGCCAAAAACGTACCCGCTAC GCAAGAATCCCTCAACATTTTCGTTCAAGACCTACCTTCGGGCGACGATTACTTCCTCGTGTTCATTAATTCAAC CCACGGCGTCATGTATGCCACCTCACCCAGATTTTCCATTCTCGATTCAGGTAGTAATCCTACCAACAAAGGCCT TGAACCGGATAGTACAGTGCCTACTGTCACGGTCAACGGAGGGCCGAACCCTACAAAAGCCTTCTCAACGACGTT TCCCGCATTACCACAGAATGGTGCTGTAGGCATATGGCCGGGAAGCTGGGAACTACTCATCATCGGCTTCACTTC ACTTCTGTGTGTGCTGGCGGGTGGTGTACGGACAATGTTATGA