Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|038480
Gene name
Locationscaffold_13:1301159..1301802
Strand+
Gene length (bp)643
Transcript length (bp)588
Coding sequence length (bp)588
Protein length (aa) 196

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10342 Kre9_KNH Kre9/KNH-like N-terminal Ig-like domain 2.9E-05 33 120

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 27 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 169 191 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|038480
MPYSRPLYACTLISVFLFFITTSVSAYFLIDEPSTDTQWVNNEAYSMRWKKGRLDGIVTFDVEMARLNSDGLVLV
AKNVPATQESLNIFVQDLPSGDDYFLVFINSTHGVMYATSPRFSILDSGSNPTNKGLEPDSTVPTVTVNGGPNPT
KAFSTTFPALPQNGAVGIWPGSWELLIIGFTSLLCVLAGGVRTML*
Coding >Agabi119p4|038480
ATGCCATACTCACGGCCGCTATACGCCTGCACTCTCATCTCTGTTTTTCTCTTTTTCATTACGACCTCGGTATCT
GCCTATTTTCTCATTGACGAACCAAGCACCGATACTCAGTGGGTAAACAATGAGGCGTACTCGATGAGATGGAAG
AAAGGGCGTTTGGATGGCATAGTCACCTTTGACGTTGAAATGGCGCGCTTGAACAGCGACGGACTAGTATTAGTC
GCCAAAAACGTACCCGCTACGCAAGAATCCCTCAACATTTTCGTTCAAGACCTACCTTCGGGCGACGATTACTTC
CTCGTGTTCATTAATTCAACCCACGGCGTCATGTATGCCACCTCACCCAGATTTTCCATTCTCGATTCAGGTAGT
AATCCTACCAACAAAGGCCTTGAACCGGATAGTACAGTGCCTACTGTCACGGTCAACGGAGGGCCGAACCCTACA
AAAGCCTTCTCAACGACGTTTCCCGCATTACCACAGAATGGTGCTGTAGGCATATGGCCGGGAAGCTGGGAACTA
CTCATCATCGGCTTCACTTCACTTCTGTGTGTGCTGGCGGGTGGTGTACGGACAATGTTATGA
Transcript >Agabi119p4|038480
ATGCCATACTCACGGCCGCTATACGCCTGCACTCTCATCTCTGTTTTTCTCTTTTTCATTACGACCTCGGTATCT
GCCTATTTTCTCATTGACGAACCAAGCACCGATACTCAGTGGGTAAACAATGAGGCGTACTCGATGAGATGGAAG
AAAGGGCGTTTGGATGGCATAGTCACCTTTGACGTTGAAATGGCGCGCTTGAACAGCGACGGACTAGTATTAGTC
GCCAAAAACGTACCCGCTACGCAAGAATCCCTCAACATTTTCGTTCAAGACCTACCTTCGGGCGACGATTACTTC
CTCGTGTTCATTAATTCAACCCACGGCGTCATGTATGCCACCTCACCCAGATTTTCCATTCTCGATTCAGGTAGT
AATCCTACCAACAAAGGCCTTGAACCGGATAGTACAGTGCCTACTGTCACGGTCAACGGAGGGCCGAACCCTACA
AAAGCCTTCTCAACGACGTTTCCCGCATTACCACAGAATGGTGCTGTAGGCATATGGCCGGGAAGCTGGGAACTA
CTCATCATCGGCTTCACTTCACTTCTGTGTGTGCTGGCGGGTGGTGTACGGACAATGTTATGA
Gene >Agabi119p4|038480
ATGCCATACTCACGGCCGCTATACGCCTGCACTCTCATCTCTGTTTTTCTCTTTTTCATTACGACCTCGGTATCT
GGTACGCTGTCGTTGTGTCTGCCGTTTTTCAGCTACAAGTATTGATTCTCATCTAGCCTATTTTCTCATTGACGA
ACCAAGCACCGATACTCAGTGGGTAAACAATGAGGCGTACTCGATGAGATGGAAGAAAGGGCGTTTGGATGGCAT
AGTCACCTTTGACGTTGAAATGGCGCGCTTGAACAGCGACGGACTAGTATTAGTCGCCAAAAACGTACCCGCTAC
GCAAGAATCCCTCAACATTTTCGTTCAAGACCTACCTTCGGGCGACGATTACTTCCTCGTGTTCATTAATTCAAC
CCACGGCGTCATGTATGCCACCTCACCCAGATTTTCCATTCTCGATTCAGGTAGTAATCCTACCAACAAAGGCCT
TGAACCGGATAGTACAGTGCCTACTGTCACGGTCAACGGAGGGCCGAACCCTACAAAAGCCTTCTCAACGACGTT
TCCCGCATTACCACAGAATGGTGCTGTAGGCATATGGCCGGGAAGCTGGGAACTACTCATCATCGGCTTCACTTC
ACTTCTGTGTGTGCTGGCGGGTGGTGTACGGACAATGTTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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