© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|038390 |
| Gene name | |
| Location | scaffold_13:1282190..1283251 |
| Strand | + |
| Gene length (bp) | 1061 |
| Transcript length (bp) | 957 |
| Coding sequence length (bp) | 957 |
| Protein length (aa) | 319 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 4.5E-13 | 48 | 302 |
| PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 6.7E-07 | 49 | 169 |
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 2.3E-06 | 49 | 305 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C3K630|LAAA_PSEFS | L-amino acid amidase OS=Pseudomonas fluorescens (strain SBW25) GN=laaA PE=3 SV=1 | 33 | 316 | 5.0E-65 |
| sp|Q76KX0|LAAA_PSEAZ | L-amino acid amidase OS=Pseudomonas azotoformans GN=laaA PE=1 SV=1 | 33 | 316 | 5.0E-64 |
| sp|C0ZKI1|PIP_BREBN | Proline iminopeptidase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pip PE=3 SV=1 | 48 | 314 | 4.0E-50 |
| sp|P46541|PIP_BACCO | Proline iminopeptidase OS=Bacillus coagulans GN=pip PE=1 SV=2 | 41 | 315 | 2.0E-46 |
| sp|Q97UA2|PIP_SULSO | Proline iminopeptidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=pip PE=3 SV=1 | 35 | 316 | 1.0E-41 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C3K630|LAAA_PSEFS | L-amino acid amidase OS=Pseudomonas fluorescens (strain SBW25) GN=laaA PE=3 SV=1 | 33 | 316 | 5.0E-65 |
| sp|Q76KX0|LAAA_PSEAZ | L-amino acid amidase OS=Pseudomonas azotoformans GN=laaA PE=1 SV=1 | 33 | 316 | 5.0E-64 |
| sp|C0ZKI1|PIP_BREBN | Proline iminopeptidase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pip PE=3 SV=1 | 48 | 314 | 4.0E-50 |
| sp|P46541|PIP_BACCO | Proline iminopeptidase OS=Bacillus coagulans GN=pip PE=1 SV=2 | 41 | 315 | 2.0E-46 |
| sp|Q97UA2|PIP_SULSO | Proline iminopeptidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=pip PE=3 SV=1 | 35 | 316 | 1.0E-41 |
| sp|A5I3F5|PIP_CLOBH | Proline iminopeptidase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pip PE=3 SV=1 | 31 | 317 | 1.0E-39 |
| sp|Q890D8|PIP_LACPL | Proline iminopeptidase OS=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=pip PE=3 SV=2 | 33 | 307 | 2.0E-33 |
| sp|Q97A76|PIP_THEVO | Proline iminopeptidase OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=pip PE=3 SV=1 | 49 | 318 | 5.0E-33 |
| sp|P96084|PIP_THEAC | Proline iminopeptidase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=pip PE=1 SV=1 | 49 | 314 | 2.0E-31 |
| sp|Q03NE0|PIP_LACBA | Proline iminopeptidase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=pip PE=3 SV=1 | 30 | 306 | 5.0E-31 |
| sp|P46542|PIP_LACDL | Proline iminopeptidase OS=Lactobacillus delbrueckii subsp. lactis GN=pip PE=1 SV=1 | 33 | 314 | 1.0E-30 |
| sp|C7TMK0|PIP_LACRL | Proline iminopeptidase OS=Lactobacillus rhamnosus (strain Lc 705) GN=pip PE=3 SV=1 | 31 | 315 | 2.0E-30 |
| sp|Q1G8L9|PIP_LACDA | Proline iminopeptidase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081 / JCM 1002 / NBRC 13953 / NCIMB 11778) GN=pepIP PE=3 SV=1 | 33 | 314 | 2.0E-30 |
| sp|P46544|PIP_LACDE | Proline iminopeptidase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pepIP PE=1 SV=2 | 33 | 314 | 2.0E-30 |
| sp|Q184M8|PIP_PEPD6 | Proline iminopeptidase OS=Peptoclostridium difficile (strain 630) GN=pip PE=3 SV=1 | 30 | 317 | 3.0E-30 |
| sp|A5FIF5|PIP_FLAJ1 | Proline iminopeptidase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=fpaP PE=3 SV=2 | 49 | 316 | 1.0E-24 |
| sp|O05420|PIP_ELIME | Proline iminopeptidase OS=Elizabethkingia meningoseptica GN=fpaP PE=1 SV=1 | 45 | 316 | 4.0E-24 |
| sp|P52278|PIP_LACHE | Proline iminopeptidase OS=Lactobacillus helveticus GN=pip PE=1 SV=1 | 17 | 316 | 4.0E-24 |
| sp|A8YWL3|PIP_LACH4 | Proline iminopeptidase OS=Lactobacillus helveticus (strain DPC 4571) GN=pip PE=3 SV=1 | 17 | 316 | 4.0E-24 |
| sp|Q5FMT1|PIP_LACAC | Proline iminopeptidase OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) GN=pip PE=3 SV=1 | 17 | 314 | 1.0E-23 |
| sp|C7PDD8|PIP_CHIPD | Proline iminopeptidase OS=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) GN=Cpin_0261 PE=3 SV=2 | 49 | 316 | 5.0E-22 |
| sp|D5H0J3|PIP_LACCS | Proline iminopeptidase OS=Lactobacillus crispatus (strain ST1) GN=pip PE=3 SV=1 | 17 | 316 | 2.0E-21 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|038390 MASTTSTESTSKIVNSVEGELVWEAPNAGKECRTFYKVYGDLKSGVRPLVCVHGGPGVSSHYLDVLSDITLERSI PIVLYDQIGNGRSTHFQEKGGDLSFWKEELFLEELKCLLVHLGVYDDYDLLGHAWGGMLASRHSVRHPGGLKRLI IWSSASSSALWLEAQAVLRKKLPQNVQDVIDRCEREGTTATQEFQEAVAVFYGRHLCTLDPVPAAMQESIRYMKT NPIIYHTLNGPTEFTMVGPNKDFSMLDEAHKISVPTLLMNGWHDQAADSCMYPYFKLIPRVRWVQFANSSQVAHL EEREKFMEIVGLFLTEDI* |
| Coding | >Agabi119p4|038390 ATGGCTTCCACGACTTCTACCGAATCCACCTCTAAAATTGTCAATTCCGTTGAAGGAGAATTGGTATGGGAGGCT CCTAACGCAGGAAAGGAATGCAGAACTTTTTACAAGGTATATGGTGATTTGAAGTCGGGCGTTCGCCCGTTGGTC TGTGTTCATGGAGGGCCTGGTGTCAGTTCGCATTACCTCGACGTATTATCCGATATCACGCTGGAGAGGTCAATT CCCATTGTTCTTTACGACCAGATTGGGAACGGACGTTCTACGCACTTTCAGGAGAAGGGAGGCGATTTATCGTTC TGGAAGGAAGAGTTGTTCTTAGAGGAGCTGAAGTGTTTGTTGGTTCATCTCGGGGTCTATGATGATTACGATCTC CTCGGCCATGCCTGGGGTGGAATGTTAGCTTCTCGTCACTCGGTCAGGCACCCAGGAGGGTTGAAACGCCTAATC ATCTGGTCTTCGGCATCCTCGAGCGCCCTCTGGCTCGAAGCCCAAGCAGTGCTCCGGAAGAAGCTCCCACAGAAC GTTCAAGACGTTATCGATAGATGTGAAAGAGAGGGTACAACCGCCACTCAAGAATTCCAAGAGGCTGTCGCTGTC TTCTATGGTCGACACCTTTGTACGCTCGACCCGGTGCCTGCGGCGATGCAAGAGAGCATCCGTTACATGAAAACG AATCCGATCATTTACCACACACTGAATGGTCCAACAGAATTTACTATGGTTGGCCCAAACAAAGATTTTTCGATG TTGGACGAGGCGCATAAGATTTCCGTTCCAACTCTCTTGATGAACGGCTGGCATGATCAGGCAGCTGACAGCTGT ATGTATCCTTATTTCAAGCTAATCCCTCGTGTTCGCTGGGTTCAGTTCGCGAATTCCAGCCAGGTGGCGCATCTC GAGGAGCGTGAAAAGTTCATGGAAATCGTCGGTCTTTTCTTGACAGAAGACATTTAG |
| Transcript | >Agabi119p4|038390 ATGGCTTCCACGACTTCTACCGAATCCACCTCTAAAATTGTCAATTCCGTTGAAGGAGAATTGGTATGGGAGGCT CCTAACGCAGGAAAGGAATGCAGAACTTTTTACAAGGTATATGGTGATTTGAAGTCGGGCGTTCGCCCGTTGGTC TGTGTTCATGGAGGGCCTGGTGTCAGTTCGCATTACCTCGACGTATTATCCGATATCACGCTGGAGAGGTCAATT CCCATTGTTCTTTACGACCAGATTGGGAACGGACGTTCTACGCACTTTCAGGAGAAGGGAGGCGATTTATCGTTC TGGAAGGAAGAGTTGTTCTTAGAGGAGCTGAAGTGTTTGTTGGTTCATCTCGGGGTCTATGATGATTACGATCTC CTCGGCCATGCCTGGGGTGGAATGTTAGCTTCTCGTCACTCGGTCAGGCACCCAGGAGGGTTGAAACGCCTAATC ATCTGGTCTTCGGCATCCTCGAGCGCCCTCTGGCTCGAAGCCCAAGCAGTGCTCCGGAAGAAGCTCCCACAGAAC GTTCAAGACGTTATCGATAGATGTGAAAGAGAGGGTACAACCGCCACTCAAGAATTCCAAGAGGCTGTCGCTGTC TTCTATGGTCGACACCTTTGTACGCTCGACCCGGTGCCTGCGGCGATGCAAGAGAGCATCCGTTACATGAAAACG AATCCGATCATTTACCACACACTGAATGGTCCAACAGAATTTACTATGGTTGGCCCAAACAAAGATTTTTCGATG TTGGACGAGGCGCATAAGATTTCCGTTCCAACTCTCTTGATGAACGGCTGGCATGATCAGGCAGCTGACAGCTGT ATGTATCCTTATTTCAAGCTAATCCCTCGTGTTCGCTGGGTTCAGTTCGCGAATTCCAGCCAGGTGGCGCATCTC GAGGAGCGTGAAAAGTTCATGGAAATCGTCGGTCTTTTCTTGACAGAAGACATTTAG |
| Gene | >Agabi119p4|038390 ATGGCTTCCACGACTTCTACCGAATCCACCTCTAAAATTGTCAATTCCGTTGAAGGAGAATTGGTATGGGAGGCT CCTAACGCAGGAAAGGAATGCAGAACTTTTTACAAGGTATATGGTGATTTGAAGTCGGGCGTTCGCCCGTTGGTC TGTGTTCATGGAGGGCCTGGTGTCAGTTCGCATTACCTCGACGTATTATCCGATATCACGCTGGAGAGGTCAATT CCCATTGTTCTTTACGACCAGATTGGGAACGGACGTTCTACGCACTTTCAGGAGAAGGGAGGCGATTTATCGTTC TGGAAGGAAGAGTTGTTCTTAGAGGAGCTGAAGTGTTTGTTGGTTCATCTCGGGGTCTATGATGATTACGATCTC CTCGGCCATGCCTGGGGTGGAATGTTAGCTTCTCGTCACTCGGTCAGGCACCCAGGAGGGTTGAAACGCCTAATC ATCTGGTCTTCGGCATCCTCGAGCGCCCTCTGGCTCGAAGCCCAAGCAGTGCTCCGGAAGAAGCTCCCACAGAAC GTTCAAGACGTTATCGATAGATGTGAAAGAGAGGGTACAACCGCCACTCAAGAATTCCAAGAGGCTGTCGCTGTC TTCTATGGTCGACACCTTTGTACGCTCGACCCGGTGCCTGCGGCGATGCAAGAGAGCATCCGTTACATGAAAACG AATCCGATCATTTACCACACACTGTAAGGCTGGCTCTCATATTCCGCATCATACTTACAACTTTATTTATAGGAA TGGTCCAACAGAATTTACTATGGTTGGCCCAAACAAAGATTTTTCGATGTTGGACGAGGCGCATAAGATTTCCGT TCCAACTCTCTTGATGAACGGCTGGCATGATCAGGCAGCTGACAGCTGTATGTATCCTTATTTCAAGCTAATCCC TCGTGTTCGCTGGGTTCAGTTCGCGGTACGTCTTCTAAGAATGTGTGGCTGTGGTGGACTTCTGATAAACGGGTA TATAGAATTCCAGCCAGGTGGCGCATCTCGAGGAGCGTGAAAAGTTCATGGAAATCGTCGGTCTTTTCTTGACAG AAGACATTTAG |