Fungal Genomics

General Properties

Protein ID	Agabi119p4|037880
Gene name
Location	scaffold_13:1145468..1147142
Strand	+
Gene length (bp)	1674
Transcript length (bp)	1623
Coding sequence length (bp)	1623
Protein length (aa)	541

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	1.5E-05	41	94

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain #	Start	End	Length
1	67	89	22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	2931
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|037880
Agaricus bisporus var bisporus H97	AgabiH97|037880
Agaricus bisporus var burnettii H119p4	Agabi119p4|037880 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|037880 MRDMNNLDDNDKNLRAVVLKCWEEEKENEENDNNSKVSTQVLPPELLSVVFLYVCAEESFARNNRHSIFLLASVC SYWRALVLGMTFLWSRLTLTVNPNSQGDPSVLQYFLDNVKQTPFALCLLFSQKQEYFSVPLGRMSAIEALLLKDR NRGKLETLRIEGFSLALCGYLPRFQSICRLEIGGIPYLNYWQPDSLQPLDLSNLAGLNQVEFYSSGCSLGVVMPW TQITSLTLKSEDIYVCVFFFTQCPNLQEFHCFSPLKFNTRVSYPEIVDNFTSEKVENLSWTSNPEQKCVTLFSRL RLPSLRSLQWYSRSYRMSDIRPDEASALHNLFSSSAFTLSCFRLHNAGSWTIDFIKTILSRAKNLRVLHLTKCNY KFVIDTLFVLRHEPDGGTFLPLLETLIIQEPEGSIRPSERERQEIQLASHIIPIFQTRDPEKKKSFSLQLSQTAG LHSKDMRTVYNALRSEGYAFNIWVDSAMTCSVKEVLERERWKKGMRNAPMVSGTHWYTSRNDEDEDQDWGDEPST RLIREAACCSLSPTT*
Coding	>Agabi119p4|037880 ATGCGCGACATGAACAATCTTGACGATAACGACAAAAATTTGAGGGCTGTTGTATTGAAGTGCTGGGAAGAAGAG AAGGAGAATGAGGAGAATGACAACAATTCCAAAGTTTCAACTCAAGTCCTGCCCCCCGAACTGCTTTCTGTAGTA TTCCTATACGTATGCGCGGAAGAAAGCTTCGCCAGAAACAACCGACACAGCATCTTTCTACTCGCGTCAGTATGC TCCTATTGGCGAGCCCTGGTTCTGGGCATGACTTTCCTGTGGTCGCGGCTCACCTTGACAGTCAATCCCAACTCT CAAGGAGATCCCTCAGTACTTCAGTACTTCCTCGATAATGTCAAACAGACCCCTTTCGCACTTTGCTTGCTATTT TCGCAAAAACAAGAATACTTCTCTGTACCTCTCGGGCGTATGTCTGCGATTGAGGCTCTGCTGTTGAAAGATAGA AATAGGGGCAAGCTAGAGACCCTCCGAATAGAGGGCTTCTCCCTCGCCTTGTGTGGTTATCTCCCCCGATTCCAA TCCATCTGTCGTCTTGAGATTGGTGGCATCCCATATTTAAATTACTGGCAACCCGATTCTCTTCAACCACTCGAT CTGTCCAACCTCGCTGGCTTGAATCAAGTTGAATTTTACTCGTCAGGGTGCTCTCTCGGCGTTGTTATGCCCTGG ACTCAAATCACGTCCTTGACACTCAAGTCCGAAGACATCTATGTATGCGTGTTCTTCTTCACTCAATGCCCCAAC CTTCAAGAATTCCACTGTTTTTCTCCTCTGAAATTCAATACGCGGGTCTCTTATCCTGAAATCGTTGATAACTTC ACTTCTGAAAAAGTGGAGAACCTTTCATGGACCTCCAACCCAGAACAGAAATGCGTGACGCTCTTCTCAAGGCTC CGACTCCCATCGTTACGATCTCTTCAATGGTACAGTCGATCTTATCGAATGTCTGATATCCGACCCGATGAAGCA TCCGCTCTACATAACCTTTTCTCCAGTTCTGCGTTCACATTATCTTGTTTCCGACTCCACAACGCAGGATCATGG ACAATCGATTTCATCAAAACCATTCTCTCTCGCGCCAAGAACTTACGAGTTTTACACCTCACCAAATGCAATTAC AAATTCGTCATCGACACTCTTTTTGTTCTCAGACACGAACCCGATGGTGGCACCTTCCTTCCTCTTCTAGAAACC CTCATTATACAAGAACCCGAAGGATCCATCCGCCCATCAGAAAGGGAAAGACAAGAAATTCAACTGGCATCGCAT ATCATTCCTATATTCCAAACTCGGGATCCTGAGAAGAAGAAGTCGTTTTCGTTGCAGCTTTCACAGACTGCTGGA TTACATTCGAAAGATATGCGAACGGTGTATAATGCGTTGCGTTCGGAAGGATATGCGTTTAATATTTGGGTTGAT TCGGCGATGACATGTTCTGTGAAGGAAGTTTTGGAACGTGAGAGGTGGAAGAAGGGAATGAGGAATGCTCCTATG GTGTCGGGGACTCATTGGTATACGTCACGTAACGACGAGGATGAGGACCAGGATTGGGGTGATGAACCAAGTACT CGGTTGATTAGAGAAGCTGCTTGTTGTTCCTTGTCTCCTACAACTTGA
Transcript	>Agabi119p4|037880 ATGCGCGACATGAACAATCTTGACGATAACGACAAAAATTTGAGGGCTGTTGTATTGAAGTGCTGGGAAGAAGAG AAGGAGAATGAGGAGAATGACAACAATTCCAAAGTTTCAACTCAAGTCCTGCCCCCCGAACTGCTTTCTGTAGTA TTCCTATACGTATGCGCGGAAGAAAGCTTCGCCAGAAACAACCGACACAGCATCTTTCTACTCGCGTCAGTATGC TCCTATTGGCGAGCCCTGGTTCTGGGCATGACTTTCCTGTGGTCGCGGCTCACCTTGACAGTCAATCCCAACTCT CAAGGAGATCCCTCAGTACTTCAGTACTTCCTCGATAATGTCAAACAGACCCCTTTCGCACTTTGCTTGCTATTT TCGCAAAAACAAGAATACTTCTCTGTACCTCTCGGGCGTATGTCTGCGATTGAGGCTCTGCTGTTGAAAGATAGA AATAGGGGCAAGCTAGAGACCCTCCGAATAGAGGGCTTCTCCCTCGCCTTGTGTGGTTATCTCCCCCGATTCCAA TCCATCTGTCGTCTTGAGATTGGTGGCATCCCATATTTAAATTACTGGCAACCCGATTCTCTTCAACCACTCGAT CTGTCCAACCTCGCTGGCTTGAATCAAGTTGAATTTTACTCGTCAGGGTGCTCTCTCGGCGTTGTTATGCCCTGG ACTCAAATCACGTCCTTGACACTCAAGTCCGAAGACATCTATGTATGCGTGTTCTTCTTCACTCAATGCCCCAAC CTTCAAGAATTCCACTGTTTTTCTCCTCTGAAATTCAATACGCGGGTCTCTTATCCTGAAATCGTTGATAACTTC ACTTCTGAAAAAGTGGAGAACCTTTCATGGACCTCCAACCCAGAACAGAAATGCGTGACGCTCTTCTCAAGGCTC CGACTCCCATCGTTACGATCTCTTCAATGGTACAGTCGATCTTATCGAATGTCTGATATCCGACCCGATGAAGCA TCCGCTCTACATAACCTTTTCTCCAGTTCTGCGTTCACATTATCTTGTTTCCGACTCCACAACGCAGGATCATGG ACAATCGATTTCATCAAAACCATTCTCTCTCGCGCCAAGAACTTACGAGTTTTACACCTCACCAAATGCAATTAC AAATTCGTCATCGACACTCTTTTTGTTCTCAGACACGAACCCGATGGTGGCACCTTCCTTCCTCTTCTAGAAACC CTCATTATACAAGAACCCGAAGGATCCATCCGCCCATCAGAAAGGGAAAGACAAGAAATTCAACTGGCATCGCAT ATCATTCCTATATTCCAAACTCGGGATCCTGAGAAGAAGAAGTCGTTTTCGTTGCAGCTTTCACAGACTGCTGGA TTACATTCGAAAGATATGCGAACGGTGTATAATGCGTTGCGTTCGGAAGGATATGCGTTTAATATTTGGGTTGAT TCGGCGATGACATGTTCTGTGAAGGAAGTTTTGGAACGTGAGAGGTGGAAGAAGGGAATGAGGAATGCTCCTATG GTGTCGGGGACTCATTGGTATACGTCACGTAACGACGAGGATGAGGACCAGGATTGGGGTGATGAACCAAGTACT CGGTTGATTAGAGAAGCTGCTTGTTGTTCCTTGTCTCCTACAACTTGA
Gene	>Agabi119p4|037880 ATGCGCGACATGAACAATCTTGACGATAACGACAAAAATTTGAGGGCTGTTGTATTGAAGTGCTGGGAAGAAGAG AAGGAGAATGAGGAGAATGACGTAACCTTTCAACGCATTCGAACCAGACATCTTGCTCACTTGTGAAAGCAGAAC AATTCCAAAGTTTCAACTCAAGTCCTGCCCCCCGAACTGCTTTCTGTAGTATTCCTATACGTATGCGCGGAAGAA AGCTTCGCCAGAAACAACCGACACAGCATCTTTCTACTCGCGTCAGTATGCTCCTATTGGCGAGCCCTGGTTCTG GGCATGACTTTCCTGTGGTCGCGGCTCACCTTGACAGTCAATCCCAACTCTCAAGGAGATCCCTCAGTACTTCAG TACTTCCTCGATAATGTCAAACAGACCCCTTTCGCACTTTGCTTGCTATTTTCGCAAAAACAAGAATACTTCTCT GTACCTCTCGGGCGTATGTCTGCGATTGAGGCTCTGCTGTTGAAAGATAGAAATAGGGGCAAGCTAGAGACCCTC CGAATAGAGGGCTTCTCCCTCGCCTTGTGTGGTTATCTCCCCCGATTCCAATCCATCTGTCGTCTTGAGATTGGT GGCATCCCATATTTAAATTACTGGCAACCCGATTCTCTTCAACCACTCGATCTGTCCAACCTCGCTGGCTTGAAT CAAGTTGAATTTTACTCGTCAGGGTGCTCTCTCGGCGTTGTTATGCCCTGGACTCAAATCACGTCCTTGACACTC AAGTCCGAAGACATCTATGTATGCGTGTTCTTCTTCACTCAATGCCCCAACCTTCAAGAATTCCACTGTTTTTCT CCTCTGAAATTCAATACGCGGGTCTCTTATCCTGAAATCGTTGATAACTTCACTTCTGAAAAAGTGGAGAACCTT TCATGGACCTCCAACCCAGAACAGAAATGCGTGACGCTCTTCTCAAGGCTCCGACTCCCATCGTTACGATCTCTT CAATGGTACAGTCGATCTTATCGAATGTCTGATATCCGACCCGATGAAGCATCCGCTCTACATAACCTTTTCTCC AGTTCTGCGTTCACATTATCTTGTTTCCGACTCCACAACGCAGGATCATGGACAATCGATTTCATCAAAACCATT CTCTCTCGCGCCAAGAACTTACGAGTTTTACACCTCACCAAATGCAATTACAAATTCGTCATCGACACTCTTTTT GTTCTCAGACACGAACCCGATGGTGGCACCTTCCTTCCTCTTCTAGAAACCCTCATTATACAAGAACCCGAAGGA TCCATCCGCCCATCAGAAAGGGAAAGACAAGAAATTCAACTGGCATCGCATATCATTCCTATATTCCAAACTCGG GATCCTGAGAAGAAGAAGTCGTTTTCGTTGCAGCTTTCACAGACTGCTGGATTACATTCGAAAGATATGCGAACG GTGTATAATGCGTTGCGTTCGGAAGGATATGCGTTTAATATTTGGGTTGATTCGGCGATGACATGTTCTGTGAAG GAAGTTTTGGAACGTGAGAGGTGGAAGAAGGGAATGAGGAATGCTCCTATGGTGTCGGGGACTCATTGGTATACG TCACGTAACGACGAGGATGAGGACCAGGATTGGGGTGATGAACCAAGTACTCGGTTGATTAGAGAAGCTGCTTGT TGTTCCTTGTCTCCTACAACTTGA