Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|037500
Gene name
Locationscaffold_13:1021583..1022814
Strand+
Gene length (bp)1231
Transcript length (bp)597
Coding sequence length (bp)597
Protein length (aa) 199

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4B3I5|A3024_ARTBC Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 28 146 2.0E-10
sp|P0DN32|CUPR1_ARTBC Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 35 129 2.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 4 26 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|037500
MKSAALVALLFGSSYVLAAEYLVGVGKDETTGKKGIGFDPSVIHPLAGDVVTFEFRSGEHSAVQTTFETPCVPLD
GGFNSGIFTVEDNISVDAPNLPTARLTINDTSPIWFFDQASRQCQQGAVFAINPTLAQTPAQFKDNAARSPVAPL
TSTDQAPTSTESPSTPAQTSGTGEPNGASRLNIYGVGGRNGMILAIND*
Coding >Agabi119p4|037500
ATGAAATCCGCTGCTCTCGTCGCTCTTTTATTTGGATCTTCCTATGTTCTTGCAGCTGAATATCTTGTCGGGGTT
GGAAAGGACGAGACAACTGGCAAGAAAGGCATTGGCTTCGATCCTTCCGTTATTCACCCTTTAGCTGGGGATGTC
GTTACATTCGAGTTCAGAAGCGGTGAACACAGTGCTGTTCAAACAACGTTTGAGACGCCATGCGTACCGCTCGAT
GGAGGATTCAATAGTGGCATATTCACCGTTGAAGATAATATTTCTGTCGATGCGCCGAATCTACCCACTGCCAGA
CTAACAATCAATGACACTAGTCCTATCTGGTTCTTCGACCAAGCATCCAGACAATGCCAACAAGGAGCGGTATTC
GCTATCAACCCGACATTGGCACAAACGCCGGCACAATTCAAAGACAACGCTGCCAGGTCACCTGTCGCTCCTTTA
ACTTCGACTGACCAAGCTCCAACTTCAACAGAGAGCCCCAGTACTCCCGCTCAAACTTCTGGAACTGGCGAGCCT
AACGGCGCGTCGAGGCTAAATATCTACGGAGTAGGCGGGCGTAACGGAATGATTTTGGCGATCAATGACTGA
Transcript >Agabi119p4|037500
ATGAAATCCGCTGCTCTCGTCGCTCTTTTATTTGGATCTTCCTATGTTCTTGCAGCTGAATATCTTGTCGGGGTT
GGAAAGGACGAGACAACTGGCAAGAAAGGCATTGGCTTCGATCCTTCCGTTATTCACCCTTTAGCTGGGGATGTC
GTTACATTCGAGTTCAGAAGCGGTGAACACAGTGCTGTTCAAACAACGTTTGAGACGCCATGCGTACCGCTCGAT
GGAGGATTCAATAGTGGCATATTCACCGTTGAAGATAATATTTCTGTCGATGCGCCGAATCTACCCACTGCCAGA
CTAACAATCAATGACACTAGTCCTATCTGGTTCTTCGACCAAGCATCCAGACAATGCCAACAAGGAGCGGTATTC
GCTATCAACCCGACATTGGCACAAACGCCGGCACAATTCAAAGACAACGCTGCCAGGTCACCTGTCGCTCCTTTA
ACTTCGACTGACCAAGCTCCAACTTCAACAGAGAGCCCCAGTACTCCCGCTCAAACTTCTGGAACTGGCGAGCCT
AACGGCGCGTCGAGGCTAAATATCTACGGAGTAGGCGGGCGTAACGGAATGATTTTGGCGATCAATGACTGA
Gene >Agabi119p4|037500
ATGAAATCCGCTGCTCTCGTCGCTCTTTTATTTGGATCTTCCTATGTTCTTGCAGCTGAATATCTTGTCGGGGTT
GGAAAGGACGAGACAACTGGGTATATTTGACAAACTCAAATTTAAACTGTCACTGAAACTACCTGCTTCTTTAGC
AAGAAAGGCATTGGCTTCGATCCTTCCGTTATTCACCCTTTAGCTGGGGATGTCGTTACATTCGAGTTCAGAAGC
GGTGAACACAGTGCTGTTCGTGAGTGCTGGATCTGTTTTTTATTGCTATGATGTTGCTAAAGGTTGGTTATACTT
AGAAACAACGTTTGAGACGCCATGCGTACCGCTCGATGGAGGATTCAATAGTGGCATATTCACCGTAGGTGGTCA
ACAGTCTCCAGAGTAGAGCAGTTCATAGAATGATATCACTCTCGGATTAGGTTGAAGATAATATTTCTGTCGATG
CGCCGAATCTACCCACTGCCAGACTAACAATCAATGACACTAGTCCTATCTGGTATGCTGTCCTGATGTTCTGAG
CGAAGACTTACTCATTCGTACCTGGTGTCTGGCAGGTTCTTCGACCAAGCATCCAGACAATGCCAACAAGGAGCG
GTATTCGCTATCAACCCGACATTGGCACAAACGCCGGCACAATTCAAAGACAACGCTGCCAGGTCACCTGTCGCT
CCTTTAACTTCGACTGACCAAGCTCCAACTTCAACAGAGAGCCCCAGTACTCCCGCTCAAACTTCTGGAACTGGC
GAGCCTAACGGCGCGTCGAGGCTAAATATCTACGGAGTAGGCGTGGGTCTGACTGGTATGGGATTGAGTGCTCTG
ATTACATTTCTGCTTTGATTTATAACGGAATGTTATGCTTGAGCAATCGCTTGCTAATTTCGACCACGCTCTCTT
ACCTAGTCATACCCCTACGCGCTTTTACCATTTTTCTGTGGTTCGTGTATAACTCTGGAAATGCATCCACTTACT
TTGAGCATTAAAGAAAGGCTGGTATCTTGACAATCCTCGATAACGTTCGCGAGTCACCGTGAAACAGTGCTTGCC
CAGCAACTTGATATATCTGCGTTCACTTAGGGGCTATTGGATACAACATTGGCCTCATTGATGTTGTCGAGTTGA
TAGGGGCGTAACGGAATGGTAGGTACTGGGTCATCTATGTATTCACCGAAGTGATTTAAGCACTCATCGACATCT
GCCATTTCAGATTTTGGCGATCAATGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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