© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Agabi119p4|035430 |
| Gene name | |
| Location | scaffold_13:466829..467374 |
| Strand | - |
| Gene length (bp) | 545 |
| Transcript length (bp) | 402 |
| Coding sequence length (bp) | 402 |
| Protein length (aa) | 134 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05347 | Complex1_LYR | Complex 1 protein (LYR family) | 1.5E-08 | 24 | 85 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q02366|NDUA6_BOVIN | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Bos taurus GN=NDUFA6 PE=1 SV=2 | 15 | 121 | 1.0E-22 |
| sp|Q0MQA3|NDUA6_PONPY | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Pongo pygmaeus GN=NDUFA6 PE=2 SV=3 | 15 | 121 | 3.0E-22 |
| sp|Q9CQZ5|NDUA6_MOUSE | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Mus musculus GN=Ndufa6 PE=1 SV=1 | 15 | 121 | 8.0E-22 |
| sp|Q0MQA5|NDUA6_PANTR | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Pan troglodytes GN=NDUFA6 PE=2 SV=3 | 15 | 121 | 4.0E-21 |
| sp|Q0MQA4|NDUA6_GORGO | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Gorilla gorilla gorilla GN=NDUFA6 PE=2 SV=3 | 15 | 121 | 4.0E-21 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q02366|NDUA6_BOVIN | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Bos taurus GN=NDUFA6 PE=1 SV=2 | 15 | 121 | 1.0E-22 |
| sp|Q0MQA3|NDUA6_PONPY | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Pongo pygmaeus GN=NDUFA6 PE=2 SV=3 | 15 | 121 | 3.0E-22 |
| sp|Q9CQZ5|NDUA6_MOUSE | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Mus musculus GN=Ndufa6 PE=1 SV=1 | 15 | 121 | 8.0E-22 |
| sp|Q0MQA5|NDUA6_PANTR | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Pan troglodytes GN=NDUFA6 PE=2 SV=3 | 15 | 121 | 4.0E-21 |
| sp|Q0MQA4|NDUA6_GORGO | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Gorilla gorilla gorilla GN=NDUFA6 PE=2 SV=3 | 15 | 121 | 4.0E-21 |
| sp|P42114|NDUA6_NEUCR | NADH-ubiquinone oxidoreductase 14.8 kDa subunit OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo14.8 PE=1 SV=3 | 1 | 121 | 4.0E-21 |
| sp|P56556|NDUA6_HUMAN | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Homo sapiens GN=NDUFA6 PE=1 SV=3 | 15 | 121 | 7.0E-21 |
| sp|Q9LHI0|NDUA6_ARATH | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thaliana GN=At3g12260 PE=2 SV=1 | 5 | 117 | 8.0E-13 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|035430 MSTIPSRLSRVARPSINSSESRSRVLQLYRDWYRSAPEICTLYALNHSPTYIRHSLRLKFEKNRYVTDQRAIDIL IHKSRLELQETMNVWKQNDHVLGILLANSEEEGPKTFLQKFYEGRDEEAVAPAASGVH* |
| Coding | >Agabi119p4|035430 ATGTCGACAATACCCTCTCGTCTTTCTAGAGTAGCTCGTCCCTCTATCAATTCTTCCGAATCTCGTTCTCGCGTT CTCCAACTCTACCGCGACTGGTACCGTTCCGCTCCAGAAATCTGCACCCTCTACGCCCTAAACCACTCTCCCACC TACATCCGTCACTCCCTCCGTCTCAAATTCGAAAAAAACCGCTATGTGACGGATCAAAGAGCGATTGACATTTTG ATTCATAAATCTCGATTGGAATTACAAGAGACTATGAATGTGTGGAAACAGAATGATCATGTTTTAGGGATTTTG TTGGCTAATTCTGAAGAGGAGGGGCCAAAAACGTTTTTGCAAAAGTTTTATGAAGGGAGAGATGAAGAGGCTGTT GCGCCTGCTGCTTCGGGTGTACATTAG |
| Transcript | >Agabi119p4|035430 ATGTCGACAATACCCTCTCGTCTTTCTAGAGTAGCTCGTCCCTCTATCAATTCTTCCGAATCTCGTTCTCGCGTT CTCCAACTCTACCGCGACTGGTACCGTTCCGCTCCAGAAATCTGCACCCTCTACGCCCTAAACCACTCTCCCACC TACATCCGTCACTCCCTCCGTCTCAAATTCGAAAAAAACCGCTATGTGACGGATCAAAGAGCGATTGACATTTTG ATTCATAAATCTCGATTGGAATTACAAGAGACTATGAATGTGTGGAAACAGAATGATCATGTTTTAGGGATTTTG TTGGCTAATTCTGAAGAGGAGGGGCCAAAAACGTTTTTGCAAAAGTTTTATGAAGGGAGAGATGAAGAGGCTGTT GCGCCTGCTGCTTCGGGTGTACATTAG |
| Gene | >Agabi119p4|035430 ATGTCGACAATACCCTCTCGTCTTTCTAGAGTAGCTCGTCCCTCTATCAATTCTTCCGAATCTCGTTCTCGCGTT CTCCAACTCTACCGCGACTGGTACCGTTCCGTACGTTTCTCTCTCCTCTCCCCCCCCTCTCTCTTCTCTCTCTCT TCATCCTTTTTTACACCACACAAAACACAGGCTCCAGAAATCTGCACCCTCTACGCCCTAAACCACTCTCCCACC TACATCCGTCACTCCCTCCGTCTCAAATTCGAAAAAAACCGCTATGTGACGGATCAAAGAGCGATTGACATTTTG ATTCATAAATCTCGATTGGAATTACAAGAGACTATGAATGTGTGGAAACAGAATGATCATGTTTTAGGGATTTTG TTGGCTAATTCTGAAGAGGAGGGGCCAAAAACGTTTTTGCAAAAGTTTTATGAAGGTGTGTTGGTGTTGTTGCTT GGAGGAAGGGAGGTAGGGTTACTGACGAGTTTTTATTTATTTTTTTAGGGAGAGATGAAGAGGCTGTTGCGCCTG CTGCTTCGGGTGTACATTAG |