Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|034340
Gene name
Locationscaffold_13:231800..234756
Strand+
Gene length (bp)2956
Transcript length (bp)1791
Coding sequence length (bp)1791
Protein length (aa) 597

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03935 SKN1_KRE6_Sbg1 Beta-glucan synthesis-associated protein SKN1/KRE6/Sbg1 3.3E-191 70 593

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P32486|KRE6_YEAST Beta-glucan synthesis-associated protein KRE6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRE6 PE=1 SV=2 67 591 3.0E-121
sp|O13941|YEPB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.11c PE=3 SV=1 48 593 3.0E-118
sp|P87024|SKN1_CANAX Beta-glucan synthesis-associated protein SKN1 OS=Candida albicans GN=SKN1 PE=2 SV=1 67 591 1.0E-117
sp|P87023|KRE6_CANAX Beta-glucan synthesis-associated protein KRE6 OS=Candida albicans GN=KRE6 PE=2 SV=1 51 591 3.0E-111
sp|P33336|SKN1_YEAST Beta-glucan synthesis-associated protein SKN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKN1 PE=1 SV=1 67 596 5.0E-110
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P32486|KRE6_YEAST Beta-glucan synthesis-associated protein KRE6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRE6 PE=1 SV=2 67 591 3.0E-121
sp|O13941|YEPB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.11c PE=3 SV=1 48 593 3.0E-118
sp|P87024|SKN1_CANAX Beta-glucan synthesis-associated protein SKN1 OS=Candida albicans GN=SKN1 PE=2 SV=1 67 591 1.0E-117
sp|P87023|KRE6_CANAX Beta-glucan synthesis-associated protein KRE6 OS=Candida albicans GN=KRE6 PE=2 SV=1 51 591 3.0E-111
sp|P33336|SKN1_YEAST Beta-glucan synthesis-associated protein SKN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKN1 PE=1 SV=1 67 596 5.0E-110
sp|O13789|YEOB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C17G6.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G6.11c PE=3 SV=1 75 596 1.0E-106
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

Domain # Start End Length
1 103 125 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|034340
MVSLSDTPVPKSSAATSFEDLLATNSTTKLNTFQDVLETRSAGIPDCDARSLADKYSLSPSPHSWGMPLLMGAPE
SDDFLHNPDPKRDRKSDKGGTICTGRGIANLGCLFILAAGMLMLFAGFPIMQHFTKHKPTTQGGFNLGGINATGQ
IPKIPGNYALIDKDTPHDAYTKKSYIHPDEELILVFSDEFNQDGRTFYPGEDPYWEAVDLHYWGTNDLEWYDPQQ
AITRDGALRLSLSEVDPVNNHNMKYRSGMVQSWNKFCFTGGLIETSVTLPGSSKVSGLWPAVWAMGNLGRAGYGA
SLEGLWPYSYDACDVGTLPNQTYPGTQTPAAALTGGDPTWDGTLSFLPGQRLSACTCPGESHPGPVRADGSYVGR
SAPEIDIFEATIDGGLGKVSLSAQWAPYNAEYRWQNTSENLIIYDTQETELNQYHGGVYQQTTSGLSTTNQDCYE
LEKGCFSVYGFEYKPGFDNAYITWINDGKQAWTLMGAGMGADTRTEIHARPVPQEPMYVIANLGFSPNFGYIDFD
KLTLPAVMSIDYVRIYQPKNAVNVGCDPVGFPTAKYIETYEEAYTNFNLTLWDSPNYPNEWPKNRLQNDGC*
Coding >Agabi119p4|034340
ATGGTGTCGTTGAGCGACACTCCTGTGCCCAAGAGTTCCGCTGCGACATCCTTCGAAGACCTTTTAGCGACCAAT
TCTACAACCAAACTAAATACCTTTCAAGATGTCCTAGAAACACGTTCGGCGGGCATTCCAGATTGCGATGCTAGG
TCACTGGCAGACAAGTATTCGCTGTCACCTTCCCCTCATTCTTGGGGAATGCCACTTCTTATGGGTGCTCCTGAA
TCCGATGATTTCTTACACAATCCCGATCCAAAGAGAGATAGAAAGTCGGACAAAGGAGGAACGATTTGCACGGGT
CGTGGAATTGCTAATTTGGGATGTCTATTTATTCTCGCTGCAGGGATGTTAATGCTTTTTGCTGGTTTTCCTATC
ATGCAACATTTCACGAAACATAAACCGACCACTCAAGGTGGTTTCAACCTCGGTGGCATCAATGCAACGGGACAA
ATCCCAAAAATACCTGGCAATTATGCTCTCATCGACAAGGATACGCCACACGACGCGTACACCAAAAAATCGTAC
ATTCATCCTGACGAAGAACTCATTTTAGTCTTTTCAGATGAGTTCAACCAGGATGGACGGACGTTCTATCCAGGT
GAAGATCCTTACTGGGAGGCGGTGGATTTACATTATTGGGGAACTAATGATTTGGAGTGGTATGATCCTCAACAA
GCGATAACACGAGACGGTGCCCTACGCTTGAGTTTGTCGGAAGTTGATCCTGTGAACAATCATAATATGAAGTAC
CGTTCTGGGATGGTTCAATCGTGGAATAAGTTTTGCTTCACGGGAGGTCTGATTGAAACATCGGTGACACTACCG
GGCTCCTCCAAAGTGAGTGGATTGTGGCCAGCTGTATGGGCTATGGGCAATTTAGGCCGTGCTGGGTACGGCGCA
AGCTTAGAAGGATTGTGGCCATATTCTTACGATGCTTGTGATGTTGGGACTCTCCCCAATCAAACATACCCAGGA
ACACAGACACCCGCCGCTGCATTAACAGGAGGGGATCCTACGTGGGATGGCACTTTATCATTTTTACCCGGGCAG
CGCCTTTCCGCTTGTACATGCCCGGGAGAATCTCACCCAGGACCGGTTCGTGCGGATGGCAGTTACGTTGGCCGG
TCCGCTCCAGAAATAGATATTTTTGAGGCTACTATCGATGGTGGCCTTGGCAAAGTTTCCCTTTCGGCTCAGTGG
GCCCCATACAACGCCGAATATAGATGGCAAAACACGTCGGAGAATTTGATCATCTATGACACACAGGAAACTGAG
CTCAATCAGTACCATGGCGGTGTTTACCAGCAAACTACGAGTGGATTATCAACGACTAATCAAGACTGCTATGAA
CTGGAGAAGGGTTGTTTCTCGGTGTATGGGTTCGAGTATAAGCCTGGATTCGACAACGCCTATATTACTTGGATC
AATGATGGAAAACAAGCATGGACTCTGATGGGAGCTGGGATGGGAGCTGATACTCGAACCGAGATCCATGCGCGA
CCTGTTCCGCAAGAACCAATGTATGTTATCGCAAACTTGGGATTCTCGCCGAATTTTGGTTATATCGATTTCGAC
AAACTGACGCTCCCTGCCGTTATGAGCATTGACTATGTACGCATATACCAACCCAAAAACGCTGTCAATGTTGGA
TGTGATCCTGTCGGATTTCCCACTGCCAAATACATAGAAACATACGAAGAAGCATACACCAATTTCAACCTAACG
CTATGGGACAGCCCCAACTATCCGAATGAATGGCCTAAAAATCGCCTCCAGAACGACGGATGCTAA
Transcript >Agabi119p4|034340
ATGGTGTCGTTGAGCGACACTCCTGTGCCCAAGAGTTCCGCTGCGACATCCTTCGAAGACCTTTTAGCGACCAAT
TCTACAACCAAACTAAATACCTTTCAAGATGTCCTAGAAACACGTTCGGCGGGCATTCCAGATTGCGATGCTAGG
TCACTGGCAGACAAGTATTCGCTGTCACCTTCCCCTCATTCTTGGGGAATGCCACTTCTTATGGGTGCTCCTGAA
TCCGATGATTTCTTACACAATCCCGATCCAAAGAGAGATAGAAAGTCGGACAAAGGAGGAACGATTTGCACGGGT
CGTGGAATTGCTAATTTGGGATGTCTATTTATTCTCGCTGCAGGGATGTTAATGCTTTTTGCTGGTTTTCCTATC
ATGCAACATTTCACGAAACATAAACCGACCACTCAAGGTGGTTTCAACCTCGGTGGCATCAATGCAACGGGACAA
ATCCCAAAAATACCTGGCAATTATGCTCTCATCGACAAGGATACGCCACACGACGCGTACACCAAAAAATCGTAC
ATTCATCCTGACGAAGAACTCATTTTAGTCTTTTCAGATGAGTTCAACCAGGATGGACGGACGTTCTATCCAGGT
GAAGATCCTTACTGGGAGGCGGTGGATTTACATTATTGGGGAACTAATGATTTGGAGTGGTATGATCCTCAACAA
GCGATAACACGAGACGGTGCCCTACGCTTGAGTTTGTCGGAAGTTGATCCTGTGAACAATCATAATATGAAGTAC
CGTTCTGGGATGGTTCAATCGTGGAATAAGTTTTGCTTCACGGGAGGTCTGATTGAAACATCGGTGACACTACCG
GGCTCCTCCAAAGTGAGTGGATTGTGGCCAGCTGTATGGGCTATGGGCAATTTAGGCCGTGCTGGGTACGGCGCA
AGCTTAGAAGGATTGTGGCCATATTCTTACGATGCTTGTGATGTTGGGACTCTCCCCAATCAAACATACCCAGGA
ACACAGACACCCGCCGCTGCATTAACAGGAGGGGATCCTACGTGGGATGGCACTTTATCATTTTTACCCGGGCAG
CGCCTTTCCGCTTGTACATGCCCGGGAGAATCTCACCCAGGACCGGTTCGTGCGGATGGCAGTTACGTTGGCCGG
TCCGCTCCAGAAATAGATATTTTTGAGGCTACTATCGATGGTGGCCTTGGCAAAGTTTCCCTTTCGGCTCAGTGG
GCCCCATACAACGCCGAATATAGATGGCAAAACACGTCGGAGAATTTGATCATCTATGACACACAGGAAACTGAG
CTCAATCAGTACCATGGCGGTGTTTACCAGCAAACTACGAGTGGATTATCAACGACTAATCAAGACTGCTATGAA
CTGGAGAAGGGTTGTTTCTCGGTGTATGGGTTCGAGTATAAGCCTGGATTCGACAACGCCTATATTACTTGGATC
AATGATGGAAAACAAGCATGGACTCTGATGGGAGCTGGGATGGGAGCTGATACTCGAACCGAGATCCATGCGCGA
CCTGTTCCGCAAGAACCAATGTATGTTATCGCAAACTTGGGATTCTCGCCGAATTTTGGTTATATCGATTTCGAC
AAACTGACGCTCCCTGCCGTTATGAGCATTGACTATGTACGCATATACCAACCCAAAAACGCTGTCAATGTTGGA
TGTGATCCTGTCGGATTTCCCACTGCCAAATACATAGAAACATACGAAGAAGCATACACCAATTTCAACCTAACG
CTATGGGACAGCCCCAACTATCCGAATGAATGGCCTAAAAATCGCCTCCAGAACGACGGATGCTAA
Gene >Agabi119p4|034340
ATGGTGTCGTTGAGCGACACTCCTGTGCCCAAGAGTTCCGCTGCGACATCCTTCGAAGACCTTTTAGCGACCAAT
TCTACAACCAAACTAAATACCTTTCAAGATGTCCTAGAAACACGTTCGGCGGGCATTCCAGATTGCGATGCTGTA
CGTTTACTCTTATATGTGGTAATTGATTGAGGCTGACGGTAGATTCTTGTGTAGAGGTCACTGGCAGACAAGGCT
CGTTGACAACTTCGATGATTTTGGCATCTTTTACCAGTACTGACTGACATTCCGTCGCCTACAGTATTCGCTGTC
ACCTTCCCCTCATTCTTGGGGAATGCCACTTCTTATGGGTGCTCCTGAATCCGATGATTTCTTACACAATCCCGA
TCCAAAGAGAGATAGAAAGTCGGACAAAGGAGGAACGATTTGCACGGGTCGTGGAATTGCTAATTTGGGATGTCT
ATTTATTCTCGCTGCAGGGATGTTAATGCTTTTGTGAGTTCTATCACCTAATAATTATTTGCAATTGAAATGACT
CTTGCTATAGTGCTGGTGTGTGCCATAGTTCCATTGGTTTGATTACTCTTTGTGCCGAGTATCAATAACCTTCAT
CAGGTTTTCCTATCATGCAACATTTCACGAAACATAAACCGACCACTCAAGGTGGTTTCAACCTCGGTGGCATCA
ATGCAACGGGACAAATCCCAAAAATACCTGGCAATTATGCTCTCATCGACAAGGATACGCCACACGACGCGTACA
CCAAAAAATCGTACATTCATCCTGACGAAGAACTCATTTTAGTCTTTTCAGATGAGTTCAACCAGGATGGACGGA
CGTTCTATCCAGGTGAAGATCCTTACTGGGAGGCGGTGGATTTACATTATTGGGGAACTGTACGTTAAACGGATT
TCCATTCAGAGATGTCTGGGAGACTAATTCTTTCGGCTATAGAATGATTTGGAGTGGTATGATCCTCAACAAGGT
CGGGTCTTCATTACTCCTTTTAGGAAGTACCATGCTGAAGATAGCTTTGAAGCGATAACACGAGACGGTGCCCTA
CGCTTGAGTTTGTCGGAAGTTGATCCTGTGAACAATCATAATATGAAGTACCGTTCTGGGATGGTAGGTGAAATA
AACCTCTTTCGTTGAAGCGACTCAAAGTTCCATCATTAGGTTCAATCGTGGTATGTTGTTCTGCAATTACATGTG
TGCCATCAACATCCAACTGTTGGATCCATCACAGGAATAAGTTTTGCTTCACGGGAGGTCTGATTGAAAGTACGT
ATCTAGTTACCCGAGGATATAGTCGCAAGCCTGAATCATGTTACCAGCATCGGTGACACTACCGGGCTCCTCCAA
AGTGAGGTAAGTCATTGTTCCGAAGCTTTTGTGTATTCCAAATGATTTATTTTCGTTGTGTCAAAATCAATCGAA
TTCAGTGGATTGTGGCCAGCTGTGTGAGTTACACCTTTTCCCGCCCAATCAAAAGATGCTGATTTTTTTTCGTTG
ATATTGGACAGATGGGCTATGGGCAATTTAGGTATGGTAGTGGTATTCAGATAGAAAACACCCATTCATTATTCT
CATTTCTCAAGGCCGTGCTGGGTACGGCGCAAGCTTAGAAGGATTGGTAAACCTTTATCCATGCTTGTTGAGTTT
ACGGAATTCATGTGTCTGGTTCAGTGGCCATATTCTTACGATGCTTGTGATGTTGGGACTCTCCCCAATCAAACA
TACCCAGGAACACAGACACCCGCCGCTGCATTAACAGGAGGGGATCCTACGTGGGATGGCACTTTAGTAAGTGGA
CCATAGAGCATCATCAATGGAAGGTCGTCTGATTTTTTTGCGTAGTCATTTTTACCCGGGCAGCGCCTTTGTGAG
CACAAACGTGATGATATTGCGTTCCGAAAGTAATATTGATTGTTTCCACCAGCCGCTTGTACATGCCCGGGAGAA
TCTCACCCAGGACCGGTTCGTGCGGATGGCAGTTACGTTGGCCGGTCCGCTCCAGAAATAGATATTTTTGAGGCT
ACTATCGATGGTGGCCTTGGCAAAGTTTCCCTTTCGGCTCAGTGGGCCCCATACAACGTGAGAAGAGTTTGCTTT
AATTGCTTTTTGTTGATGTTGTGATCTCGCTTCCGGTAGGCCGAATATAGATGGCAAAACACGTCGGAGAATTTG
ATCATCTATGACACACAGGAAACTGAGCTCAATCAGTACCATGGCGGTGAGTTGATTGATTGCAGACCTCCCTTG
GTTCACAACTGAAGGGTCCAACGCATGGTCACTTAGGTGTTTACCAGCAAACTACGAGTGGATTATCAACGACTA
ATCAAGACTGCTATGAACTGGAGAAGGGTTGTTTCTCGGTGTATGGGTTCGAGTATAAGCCTGGGTACATAATCA
CATTCTACTACTCAAGTTGATTGAATGGATAATGAATGATTTTTAGATTCGACAACGCCTATATTACTTGGATCA
ATGATGGAAAACAAGCATGGACTCTGATGGGAGCTGGGATGGGAGCTGATACTCGAACCGAGATCCATGCGCGAC
CTGTTCCGCAAGAACCAATGGTAGGTGTCCATTCCTAATCATTTTTAAGTGTATGTCGAATCTTGAACCTTTCCC
CCTACAGTATGTTATCGCAAACTTGGGATTCTCGCCGAATTTTGGTTATATCGATTTCGACAAACTGACGCTCCC
TGCCGTTATGAGCATTGACTATGTACGCATATACCAACCCAAAAACGCTGTCAATGTTGGATGTGATCCTGTCGG
ATTTCCCACTGCCAAATACATAGAAACGTATGTCCTCCCTTCGCCCATTGTCTCCCATGTTCTTATATCCAATTT
TCGCAGATACGAAGAAGCATACACCAATTTCAACCTAACGCTATGGGACAGCCCCAACTATCCGAATGAATGGCC
TAAAAATCGCCTCCAGAACGACGGATGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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