Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|034250
Gene name
Locationscaffold_13:214517..216093
Strand-
Gene length (bp)1576
Transcript length (bp)1089
Coding sequence length (bp)1089
Protein length (aa) 363

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04909 Amidohydro_2 Amidohydrolase 2.8E-28 76 360

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P80402|DBD23_ASPOR 2,3-dihydroxybenzoate decarboxylase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=AO090005000447 PE=1 SV=2 34 335 2.0E-78
sp|P0CT50|SDC_TRIMF Salicylate decarboxylase OS=Trichosporon moniliiforme GN=sdc PE=1 SV=1 34 362 2.0E-71
sp|Q0II68|ACMSD_BOVIN 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Bos taurus GN=ACMSD PE=2 SV=1 65 362 3.0E-17
sp|Q8TDX5|ACMSD_HUMAN 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Homo sapiens GN=ACMSD PE=1 SV=1 23 362 6.0E-17
sp|Q8R5M5|ACMSD_RAT 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Rattus norvegicus GN=Acmsd PE=1 SV=1 23 362 3.0E-16
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Swissprot ID Swissprot Description Start End E-value
sp|P80402|DBD23_ASPOR 2,3-dihydroxybenzoate decarboxylase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=AO090005000447 PE=1 SV=2 34 335 2.0E-78
sp|P0CT50|SDC_TRIMF Salicylate decarboxylase OS=Trichosporon moniliiforme GN=sdc PE=1 SV=1 34 362 2.0E-71
sp|Q0II68|ACMSD_BOVIN 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Bos taurus GN=ACMSD PE=2 SV=1 65 362 3.0E-17
sp|Q8TDX5|ACMSD_HUMAN 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Homo sapiens GN=ACMSD PE=1 SV=1 23 362 6.0E-17
sp|Q8R5M5|ACMSD_RAT 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Rattus norvegicus GN=Acmsd PE=1 SV=1 23 362 3.0E-16
sp|Q8R519|ACMSD_MOUSE 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Mus musculus GN=Acmsd PE=1 SV=2 23 362 3.0E-15
sp|Q54LN9|ACMSD_DICDI 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Dictyostelium discoideum GN=acmsd PE=3 SV=1 64 361 4.0E-15
sp|P80346|DBD23_ASPNG 2,3-dihydroxybenzoate decarboxylase (Fragments) OS=Aspergillus niger PE=1 SV=1 34 168 1.0E-06
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GO

GO Term Description Terminal node
GO:0016787 hydrolase activity Yes
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|034250
MLSLAALRLVILGVCVMNSLPKVLSKEWRNSGNGRIVLEEAWTVPELIHQIGNTSAALGGTNAELKANLLDIHNQ
RRQFMDENNIDFMVVSCANPCIQGLSDPVEAENMAVTVNNRLAETIANDTERFGGFASLSMHNATNAALELNRTV
TELGFVGALVNDYQQSGPDNTTLLYYDQPEYDVFWQMVSDLDVPVYFHPRSNIAQIGSLMTGHARWLKGPAQEFA
ATLSNHILGLCTNGVFDRFPKAKIIVGHLGERIPSDLGRIDEQLLRQIPNGIPMKLNVSSYWQTNIWETTSGNFQ
TPLMKFHMDTIGLNRIMYSVDYPYVAIPEGEAWLQTLPSVLSAEELNSLTRNVAIEVLGLNK*
Coding >Agabi119p4|034250
ATGCTTTCTCTTGCCGCACTGCGACTTGTCATCCTTGGGGTCTGTGTCATGAACAGTCTTCCGAAAGTCCTTTCC
AAAGAGTGGAGGAATAGTGGAAACGGAAGAATCGTTCTTGAAGAAGCCTGGACTGTCCCAGAGCTTATTCATCAG
ATCGGTAACACAAGCGCGGCATTGGGAGGGACAAATGCAGAATTGAAGGCGAATTTGTTAGACATTCATAATCAA
CGTCGTCAATTCATGGATGAAAATAATATCGATTTTATGGTTGTGTCTTGTGCTAACCCGTGTATTCAAGGATTA
TCTGATCCTGTTGAGGCCGAAAATATGGCAGTAACGGTAAACAACAGGCTCGCGGAAACCATTGCCAACGACACG
GAAAGGTTCGGAGGCTTTGCTTCGTTGTCAATGCACAATGCCACGAATGCCGCCCTTGAACTGAACCGTACCGTC
ACGGAGCTTGGTTTTGTAGGAGCATTGGTAAACGACTACCAACAATCCGGACCTGATAACACCACACTTCTTTAT
TACGATCAGCCCGAATATGACGTGTTTTGGCAAATGGTCTCTGACCTTGACGTGCCTGTTTATTTCCATCCGCGG
TCCAACATCGCGCAAATAGGCAGCCTCATGACCGGACATGCGAGATGGCTCAAAGGCCCTGCCCAAGAATTCGCC
GCCACTCTGTCAAACCACATCTTGGGGCTTTGTACGAACGGAGTTTTCGACCGATTTCCCAAGGCAAAAATTATC
GTAGGCCACCTGGGTGAACGCATTCCGTCGGACCTTGGCAGGATAGACGAACAACTCTTGCGTCAAATACCGAAC
GGCATACCAATGAAACTCAACGTCAGCTCTTATTGGCAGACCAATATTTGGGAGACAACATCTGGGAACTTTCAA
ACTCCTCTGATGAAATTCCACATGGACACTATTGGGTTAAACCGCATCATGTATTCCGTTGATTATCCCTATGTT
GCAATACCTGAAGGTGAAGCTTGGCTTCAAACTTTGCCTTCGGTTCTTTCTGCGGAGGAGTTGAACAGTCTTACA
CGTAACGTCGCTATTGAGGTTTTGGGATTGAACAAGTAG
Transcript >Agabi119p4|034250
ATGCTTTCTCTTGCCGCACTGCGACTTGTCATCCTTGGGGTCTGTGTCATGAACAGTCTTCCGAAAGTCCTTTCC
AAAGAGTGGAGGAATAGTGGAAACGGAAGAATCGTTCTTGAAGAAGCCTGGACTGTCCCAGAGCTTATTCATCAG
ATCGGTAACACAAGCGCGGCATTGGGAGGGACAAATGCAGAATTGAAGGCGAATTTGTTAGACATTCATAATCAA
CGTCGTCAATTCATGGATGAAAATAATATCGATTTTATGGTTGTGTCTTGTGCTAACCCGTGTATTCAAGGATTA
TCTGATCCTGTTGAGGCCGAAAATATGGCAGTAACGGTAAACAACAGGCTCGCGGAAACCATTGCCAACGACACG
GAAAGGTTCGGAGGCTTTGCTTCGTTGTCAATGCACAATGCCACGAATGCCGCCCTTGAACTGAACCGTACCGTC
ACGGAGCTTGGTTTTGTAGGAGCATTGGTAAACGACTACCAACAATCCGGACCTGATAACACCACACTTCTTTAT
TACGATCAGCCCGAATATGACGTGTTTTGGCAAATGGTCTCTGACCTTGACGTGCCTGTTTATTTCCATCCGCGG
TCCAACATCGCGCAAATAGGCAGCCTCATGACCGGACATGCGAGATGGCTCAAAGGCCCTGCCCAAGAATTCGCC
GCCACTCTGTCAAACCACATCTTGGGGCTTTGTACGAACGGAGTTTTCGACCGATTTCCCAAGGCAAAAATTATC
GTAGGCCACCTGGGTGAACGCATTCCGTCGGACCTTGGCAGGATAGACGAACAACTCTTGCGTCAAATACCGAAC
GGCATACCAATGAAACTCAACGTCAGCTCTTATTGGCAGACCAATATTTGGGAGACAACATCTGGGAACTTTCAA
ACTCCTCTGATGAAATTCCACATGGACACTATTGGGTTAAACCGCATCATGTATTCCGTTGATTATCCCTATGTT
GCAATACCTGAAGGTGAAGCTTGGCTTCAAACTTTGCCTTCGGTTCTTTCTGCGGAGGAGTTGAACAGTCTTACA
CGTAACGTCGCTATTGAGGTTTTGGGATTGAACAAGTAG
Gene >Agabi119p4|034250
ATGCTTTCTCTTGCCGCACTGCGACTTGTCATCCTTGGGGTCTGTGTCATGAACAGTCTTCCGAAAGTCCTTTCC
AAAGAGTGGAGGAATAGTGGAAACGGAAGAATCGTTCTTGAAGAAGCCTGGACTGTCCCAGAGCTTATTCATCAG
ATCGGGTGAGTCCAGATTTTTGCGGATGTCCGAAAAGACACTCAGACGTGAACAGTAACACAAGCGCGGCATTGG
GTATCAACAAGTCACGGTTTTTTTCTTCCCCTAGTTGATTTGGCTCCAGGAGGGACAAATGCAGAATTGAAGGCG
AATTTGTTAGACATTCATAATCAACGTCGTCAATTCATGGATGAAAATAATATCGATTTTGTAAGACAATGCCTC
GTAAATCACGTTTGTCTGATCTGCTCACCATCTCATATTCTCTCACAGATGGTTGTGTCTTGTGCTAACCCGTGT
ATTCAAGGATTATCTGATCCTGTTGAGGCCGAAAATATGGCAGTAACGGTAAACAACAGGCTCGCGGAAACCATT
GCCAACGACACGGAAAGGTTCGGAGGCTTTGCTTCGTTGTCAATGCACAATGCCACGAATGCCGCCCTTGAACTG
AACCGTACCGTCACGGAGCTTGGTTTTGTAGGCATGTAGGGTTCCAACATCCCGACTCTCGACGCTAAATCTACA
AATTCAGGAGCATTGGTAAACGACTACCAACAATCCGGACCTGATAACAGTGAGCATCCATTTATCTTCCATAAA
TCACTGTTAGTGAAACGCGTTTCAGCCACACTTCTTTATTACGATCAGCCCGAATATGACGTGTTTTGGCAAATG
GTCTCTGACCTTGACGTGCCTGTTTATTTCCATCCGCGGTCCAACATCGCGCAAATAGGCAGCCTCATGACCGGA
CATGCGAGATGGCTCAAAGGCCCTGCCCAAGAATTCGCCGCCACTCTGTCAAACCACATCTTGGGGTATGTAGTT
CGTAATGCGACTAGGTTTCTGACCGATGGGTTTATACCTGTTTCAGGCTTTGTACGAACGGAGTTTTCGAGTAAT
TGTCTACCTCTTCCTTATTCTTGTTGCGACTCATTATGATAATTACAGCCGATTTCCCAAGGCAAAAATTATCGT
AGGCCACCTGGGTGAACGCATTCCGTCGGACCTTGGCAGGATAGACGAACGTAGGTCGGTTTCCTTCCAAAATGA
CACGTAGACTAATATTCTCATACGTCAGAACTCTTGCGTCAAATACCGAACGGCATACCAATGAAACTCAACGTC
AGCTCTTATTGGCAGACCAATATTTGGGAGACAACATCTGGGAACTTTCAAACTCCTCTGATGAAATTCCACATG
GACACTATTGGGTTAAACCGCATCATGTATTCCGTTGATTATCCCTATGTGAGTAAACAAAGAACGCTTCTGAAG
TTCGAATTCAGGCTATAACTAAGAGCAATTAAAGGTTGCAATACCTGAAGGTGAAGCTTGGCTTCAAACTTTGCC
TTCGGTTCTTTCTGCGGAGGAGTTGAACAGTCTTACACGTAACGTCGCTATTGAGGTTTTGGGATTGAACAAGTA
G

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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