© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Agabi119p4|031610 |
| Gene name | |
| Location | scaffold_12:1006931..1009203 |
| Strand | + |
| Gene length (bp) | 2272 |
| Transcript length (bp) | 1749 |
| Coding sequence length (bp) | 1749 |
| Protein length (aa) | 583 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02538 | Hydantoinase_B | Hydantoinase B/oxoprolinase | 7.2E-207 | 8 | 549 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10093|YAOE_SCHPO | Uncharacterized protein C11D3.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.14c PE=3 SV=1 | 8 | 549 | 0.0E+00 |
| sp|Q10094|YAOF_SCHPO | Uncharacterized protein C11D3.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.15 PE=3 SV=1 | 8 | 542 | 0.0E+00 |
| sp|Q9FIZ7|OPLA_ARATH | 5-oxoprolinase OS=Arabidopsis thaliana GN=OXP1 PE=2 SV=1 | 8 | 549 | 0.0E+00 |
| sp|O14841|OPLA_HUMAN | 5-oxoprolinase OS=Homo sapiens GN=OPLAH PE=1 SV=3 | 8 | 581 | 0.0E+00 |
| sp|P28273|OPLA_YEAST | 5-oxoprolinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OXP1 PE=1 SV=2 | 8 | 549 | 0.0E+00 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q10093|YAOE_SCHPO | Uncharacterized protein C11D3.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.14c PE=3 SV=1 | 8 | 549 | 0.0E+00 |
| sp|Q10094|YAOF_SCHPO | Uncharacterized protein C11D3.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.15 PE=3 SV=1 | 8 | 542 | 0.0E+00 |
| sp|Q9FIZ7|OPLA_ARATH | 5-oxoprolinase OS=Arabidopsis thaliana GN=OXP1 PE=2 SV=1 | 8 | 549 | 0.0E+00 |
| sp|O14841|OPLA_HUMAN | 5-oxoprolinase OS=Homo sapiens GN=OPLAH PE=1 SV=3 | 8 | 581 | 0.0E+00 |
| sp|P28273|OPLA_YEAST | 5-oxoprolinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OXP1 PE=1 SV=2 | 8 | 549 | 0.0E+00 |
| sp|Q8K010|OPLA_MOUSE | 5-oxoprolinase OS=Mus musculus GN=Oplah PE=1 SV=1 | 8 | 581 | 0.0E+00 |
| sp|P97608|OPLA_RAT | 5-oxoprolinase OS=Rattus norvegicus GN=Oplah PE=1 SV=2 | 8 | 581 | 0.0E+00 |
| sp|Q75WB5|OPLA_BOVIN | 5-oxoprolinase OS=Bos taurus GN=OPLAH PE=1 SV=1 | 8 | 542 | 0.0E+00 |
| sp|Q54NW6|OPLA_DICDI | 5-oxoprolinase OS=Dictyostelium discoideum GN=oplah PE=3 SV=2 | 8 | 549 | 4.0E-176 |
| sp|Q58373|Y963_METJA | Uncharacterized protein MJ0963 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0963 PE=3 SV=1 | 8 | 543 | 1.0E-89 |
| sp|Q01263|HYUB_PSESN | Hydantoin utilization protein B OS=Pseudomonas sp. (strain NS671) GN=hyuB PE=3 SV=1 | 5 | 496 | 1.0E-49 |
| sp|Q5P5G5|APCD_AROAE | Acetophenone carboxylase delta subunit OS=Aromatoleum aromaticum (strain EbN1) GN=apc4 PE=1 SV=1 | 44 | 537 | 1.0E-20 |
| sp|Q8RM03|ACXB_XANP2 | Acetone carboxylase alpha subunit OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=acxB PE=1 SV=1 | 8 | 462 | 5.0E-13 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003824 | catalytic activity | Yes |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|031610 MSSSKGPDPILLTLFANRFMSVAEAMGRSLQQTSISTNIKERLDFSCALFAPDGDLVANAPFIPIHLGAMSFAVK YQMKLHGSSLKEGDVLMANSPVAGGSHLPDITIITPVFAPNSKEIIFFTASRGHHADIGGILPGSMPPTSVNIFQ EGAEIESFKIVDGGIFDEKGLIEYMVEKPSQYPGSSGCRNIRDVQSDLKAQIAANHKGIQLIHAIVEDYGLETVQ EYMYHIRNNAETSVRNLLKDVAKRAGSNILSAVDYLDDGSPISLRVEINETEGSATLDFAGTGSEVRGNLNAPIS VVHSAVIYCMRAMLDMDIPLNAGCLVPLDIKIPKKSLLSPSRTAAVCGGNVLTSQRIVDVVLKAFHACAASQGCT NNLTFGTGGKDKDGKAEAGWGYYETIAGGSGAGPGWHGTDGVHTHITNTRIGDVEILERRYPVLLHRFGIRTGSG GTGKWHGGDGVQREIEFLEPMQVSILSERRTRQPYGMEGGNSGMMGKNTWIKKLREGDGDLDNNNETGTRDINIG GKATVFMGKGDRLLIETPGAGAWGVAEEDGRKKDFVHVRAWEPRGSIADRAAAQAAF* |
| Coding | >Agabi119p4|031610 ATGTCTTCTTCGAAAGGACCAGACCCCATCCTGCTCACCTTGTTCGCCAACCGCTTCATGAGCGTGGCAGAGGCC ATGGGCCGATCCTTGCAACAAACCTCTATCAGCACAAATATAAAAGAACGTCTCGATTTTTCTTGTGCGCTTTTC GCCCCAGACGGAGACCTCGTAGCGAATGCTCCATTTATTCCAATTCATTTGGGAGCCATGAGTTTTGCAGTGAAG TATCAGATGAAACTTCATGGATCATCTCTCAAGGAGGGAGACGTCCTCATGGCCAATTCACCAGTCGCTGGGGGA TCTCATCTTCCGGACATAACCATCATAACCCCAGTCTTCGCTCCCAACTCCAAGGAAATCATCTTCTTTACAGCG TCAAGAGGCCACCATGCTGATATCGGAGGCATCCTACCTGGATCTATGCCTCCCACCTCTGTCAATATTTTCCAG GAAGGTGCTGAAATCGAAAGCTTCAAGATTGTTGATGGTGGAATATTCGATGAGAAGGGTTTGATTGAGTATATG GTTGAAAAACCGAGTCAATATCCCGGTAGTTCTGGCTGCAGAAACATCCGTGATGTTCAGAGTGACCTTAAAGCG CAAATCGCCGCAAATCACAAAGGAATCCAGCTGATTCACGCAATTGTCGAAGACTACGGTCTTGAGACTGTACAA GAATACATGTATCATATCCGAAACAATGCAGAAACGTCTGTCAGAAATCTTCTCAAAGACGTAGCCAAAAGAGCT GGTTCAAACATTCTCTCAGCGGTCGACTATCTAGACGACGGATCGCCCATATCACTTCGTGTTGAGATCAACGAA ACAGAGGGTTCTGCTACTCTTGATTTTGCGGGCACAGGATCTGAAGTCAGAGGGAACCTGAATGCTCCGATATCG GTAGTCCATTCAGCTGTCATTTATTGCATGCGAGCTATGCTCGACATGGATATTCCTTTGAATGCGGGCTGCCTT GTTCCTTTGGACATCAAAATTCCGAAAAAGTCTTTATTGTCGCCTTCACGTACTGCCGCAGTTTGTGGTGGTAAT GTTTTGACTTCTCAGAGAATCGTGGACGTCGTTCTTAAGGCATTCCATGCTTGTGCCGCTAGTCAAGGATGCACA AACAACCTTACATTCGGTACCGGAGGCAAAGACAAGGACGGCAAAGCGGAAGCAGGATGGGGTTACTACGAGACT ATTGCTGGTGGTTCAGGAGCTGGGCCTGGCTGGCATGGGACAGATGGCGTTCATACTCATATTACTAATACACGT ATTGGTGATGTAGAGATTTTGGAAAGAAGGTATCCGGTGTTGCTTCATCGGTTTGGGATACGGACTGGGTCTGGC GGGACTGGAAAATGGCATGGTGGGGATGGGGTTCAGCGAGAAATTGAATTTTTGGAACCTATGCAGGTGTCGATA TTATCTGAGAGAAGGACAAGACAGCCATATGGTATGGAAGGTGGTAATTCAGGTATGATGGGAAAGAACACATGG ATCAAGAAATTGCGTGAAGGAGATGGCGATTTAGATAACAACAACGAGACAGGGACACGCGATATCAATATTGGT GGAAAGGCTACAGTGTTTATGGGTAAGGGAGATCGGTTGCTTATTGAAACTCCTGGTGCTGGAGCTTGGGGAGTT GCGGAGGAGGATGGGAGGAAGAAAGATTTTGTACATGTGAGAGCTTGGGAGCCTAGAGGTTCTATTGCGGATCGT GCTGCTGCTCAAGCTGCTTTTTAA |
| Transcript | >Agabi119p4|031610 ATGTCTTCTTCGAAAGGACCAGACCCCATCCTGCTCACCTTGTTCGCCAACCGCTTCATGAGCGTGGCAGAGGCC ATGGGCCGATCCTTGCAACAAACCTCTATCAGCACAAATATAAAAGAACGTCTCGATTTTTCTTGTGCGCTTTTC GCCCCAGACGGAGACCTCGTAGCGAATGCTCCATTTATTCCAATTCATTTGGGAGCCATGAGTTTTGCAGTGAAG TATCAGATGAAACTTCATGGATCATCTCTCAAGGAGGGAGACGTCCTCATGGCCAATTCACCAGTCGCTGGGGGA TCTCATCTTCCGGACATAACCATCATAACCCCAGTCTTCGCTCCCAACTCCAAGGAAATCATCTTCTTTACAGCG TCAAGAGGCCACCATGCTGATATCGGAGGCATCCTACCTGGATCTATGCCTCCCACCTCTGTCAATATTTTCCAG GAAGGTGCTGAAATCGAAAGCTTCAAGATTGTTGATGGTGGAATATTCGATGAGAAGGGTTTGATTGAGTATATG GTTGAAAAACCGAGTCAATATCCCGGTAGTTCTGGCTGCAGAAACATCCGTGATGTTCAGAGTGACCTTAAAGCG CAAATCGCCGCAAATCACAAAGGAATCCAGCTGATTCACGCAATTGTCGAAGACTACGGTCTTGAGACTGTACAA GAATACATGTATCATATCCGAAACAATGCAGAAACGTCTGTCAGAAATCTTCTCAAAGACGTAGCCAAAAGAGCT GGTTCAAACATTCTCTCAGCGGTCGACTATCTAGACGACGGATCGCCCATATCACTTCGTGTTGAGATCAACGAA ACAGAGGGTTCTGCTACTCTTGATTTTGCGGGCACAGGATCTGAAGTCAGAGGGAACCTGAATGCTCCGATATCG GTAGTCCATTCAGCTGTCATTTATTGCATGCGAGCTATGCTCGACATGGATATTCCTTTGAATGCGGGCTGCCTT GTTCCTTTGGACATCAAAATTCCGAAAAAGTCTTTATTGTCGCCTTCACGTACTGCCGCAGTTTGTGGTGGTAAT GTTTTGACTTCTCAGAGAATCGTGGACGTCGTTCTTAAGGCATTCCATGCTTGTGCCGCTAGTCAAGGATGCACA AACAACCTTACATTCGGTACCGGAGGCAAAGACAAGGACGGCAAAGCGGAAGCAGGATGGGGTTACTACGAGACT ATTGCTGGTGGTTCAGGAGCTGGGCCTGGCTGGCATGGGACAGATGGCGTTCATACTCATATTACTAATACACGT ATTGGTGATGTAGAGATTTTGGAAAGAAGGTATCCGGTGTTGCTTCATCGGTTTGGGATACGGACTGGGTCTGGC GGGACTGGAAAATGGCATGGTGGGGATGGGGTTCAGCGAGAAATTGAATTTTTGGAACCTATGCAGGTGTCGATA TTATCTGAGAGAAGGACAAGACAGCCATATGGTATGGAAGGTGGTAATTCAGGTATGATGGGAAAGAACACATGG ATCAAGAAATTGCGTGAAGGAGATGGCGATTTAGATAACAACAACGAGACAGGGACACGCGATATCAATATTGGT GGAAAGGCTACAGTGTTTATGGGTAAGGGAGATCGGTTGCTTATTGAAACTCCTGGTGCTGGAGCTTGGGGAGTT GCGGAGGAGGATGGGAGGAAGAAAGATTTTGTACATGTGAGAGCTTGGGAGCCTAGAGGTTCTATTGCGGATCGT GCTGCTGCTCAAGCTGCTTTTTAA |
| Gene | >Agabi119p4|031610 ATGTCTTCTTCGAAAGGACCAGACCCCATCCTGCTCACCTTGTTCGCCAACCGCTTCATGAGCGTGGCAGAGGCC ATGGGCCGATCCTTGCAACAAACCTCTATCAGCACAAATATAAAAGAACGTCTCGATTTTTCTTGTGCGCTTTTC GCCCCAGACGGAGACCTCGTAGCGAATGCTCCATTTATTCCAATTCATTTGGGAGCCATGAGTTTGTTAGTACCA CGTCTACTTTGTCGAGAGATTTGCTTACGATGTCCTGAATTAGTGCAGTGAAGTATCAGATGAAACTTCATGGAT CATCTCTCAAGGAGGGAGACGTCCTCATGGCCAATTCACCAGTCGCTGGGGGATCGTACGTTCTCTTTTACGTGT GTTTTTCGTTACCAATTCAGCTTACATTTCACAGTCATCTTCCGGACATAACCATCATAACCCCAGTCTTCGCTC CCAACTCCAAGGAAATCATCTTCTTTACAGCGTCAAGAGGCCACCATGCTGATATCGGAGGCATCCTACCTGGAT CTATGCCTCCCACCTCTGTCAATATTTTCCAGGAAGGTGCTGAAATCGAAAGCTTCAAGATTGTTGATGGTGGAA TATTCGATGAGAAGGGTTTGATTGAGTATATGGTTGAAAAACCGAGTCAATATCCCGGTAGTTCTGGCTGCAGAA ACATCCGTGATGTTCAGAGTGACCTTAAAGCGGTAAGATTCATATATGCGCCGAAATTCCTCTCCTCCTACTGAA CCGTGCTTGAATAGCAAATCGCCGCAAATCACAAAGGAATCCAGCTGATTCACGCAAGTGAGTTCTCCTCCTCGC TTCCTCTAGCATGCTTTTTTCTAACTCCACGATTGCTCGTAGTTGTCGAAGACTACGGTCTTGAGACTGTACAAG AATACATGTATCATATCCGAAACAATGCAGAAACGTCTGTCAGAAATCTTCTCAAAGACGTAGCCAAAAGAGCTG GTTCAAACATTCTCTCAGCGGTCGACTATCTAGACGACGGATCGCCCGTGAGTGGTTGTTTTTTCCCTTTTCTCG ACTCTTAAGCTCGCATAGATATCACTTCGTGTTGAGATCAACGAAACAGAGGGTTCTGCTACTCTTGATTTTGCG GGCACAGGATCTGAAGTCAGAGGGAACCTGAATGCTCCGATATCGGTAGTCCATTCAGCTGTCATTTATTGCATG CGAGCTATGCTCGACATGGATATTCCTTTGAATGCGGGCTGCCTTGTTCCTTTGGACAGTGCGTGCGCTTTCTCT AGCCATGAAGCTATACTCTAATTTATCTATTTTTTTCCAGTCAAAATTCCGAAAAAGTCTTTATTGTCGCCTTCA CGTACTGCCGCAGTTTGTGGTGGTAATGTTTTGACTTCTCAGAGAATCGTGGACGTCGTTCTTAAGGCATTCCAT GCTTGTGCCGCTAGTCAAGGATGCACAAAGTCTGTATTTTCTTGTCCCTTTCCAATTTCTCCCTTTTAATGCACT ATTTTCCTTTAGCAACCTTACATTCGGTACCGGAGGCAAAGACAAGGACGGCAAAGCGGAAGCAGGATGGGGTTA CTACGAGGTTAGTTTCTCACCTTACGATTACTCACTAGGATTCTAAACTCATATATTCGAATGATTTTTTGAGAC TATTGCTGGTGGTTCAGGAGCTGGGCCTGGCTGGCATGGGACAGATGGCGTTCATACTCATATTACTAATACACG TATTGGTGATGTAGAGATTTTGGAAAGAAGGTATCCGGTGTTGCTTCATCGGTTTGGGATACGGACTGGGTCTGG CGGGACTGGAAAATGGCATGGTGGGGATGGGGTTCAGCGAGAAATTGAATTTTTGGAACCTATGCAGGTGTCGAT ATTATCTGAGGTAATGTTGTCTCCGATCCCGTATCTTTTACGAGTATCAGGTTTATATCTTTTTTTTTTTTTTCT TTTATAGAGAAGGACAAGACAGCCATATGGTATGGAAGGTGGTAATTCAGGTATGATGGGAAAGAACACATGGAT CAAGAAATTGCGTGAAGGAGATGGCGATTTAGATAACAACAACGAGACAGGGACACGCGATATCAATATTGGTGG AAAGGCTACAGTGTTTATGGGTAAGGGAGATCGGTTGCTTATTGAAACTCCTGGTGCTGGAGCTTGGGGAGTTGC GGAGGAGGATGGGAGGAAGAAAGATTTTGTACATGTGAGAGCTTGGGAGCCTAGAGGTTCTATTGCGGATCGTGC TGCTGCTCAAGCTGCTTTTTAA |