Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|031500
Gene name
Locationscaffold_12:981338..982910
Strand+
Gene length (bp)1572
Transcript length (bp)951
Coding sequence length (bp)951
Protein length (aa) 317

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08450 SGL SMP-30/Gluconolactonase/LRE-like region 3.9E-11 196 292

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|031500
MMTITISVALLGASIAYANIHQGRAVNAGLPPQSVLVDPKSFAVLPDDFSYRTDSFNQHFNPTNSQDFPTFQVFN
GAFLDIIGSSPSISEIASNSSFAFAHEAPDHWAEQMLSSGGSQTVNVPITQIPLPDSIQMTNGATGPSNGNLILA
NSGRGTIPSTIALVNSKPPHNATFTRQVEIFSLRIPSMASLTDSCSDGKTAYIADTGASGGKPTEPGTVYAFDVD
PTTETFLNRRILAYIDAGVPDGLQVDVNGNVYTACADGVQVFDADGTLLGKFFLDISSANMVFAGPGRMVILAET
KVFLAKIAPTTKGVVS*
Coding >Agabi119p4|031500
ATGATGACGATCACCATTTCGGTTGCTTTACTCGGGGCCTCCATTGCATACGCAAATATACATCAAGGCAGAGCT
GTAAATGCCGGTCTCCCGCCTCAATCAGTTTTAGTAGACCCAAAATCATTCGCCGTCCTCCCCGACGACTTCAGT
TACCGTACCGACAGTTTCAACCAACATTTCAACCCAACCAATTCCCAGGACTTTCCCACATTTCAAGTATTTAAC
GGGGCTTTCCTCGACATCATAGGATCATCTCCTTCCATATCGGAAATTGCATCCAATTCGTCTTTTGCTTTTGCT
CATGAAGCACCTGACCACTGGGCGGAGCAAATGTTGAGTTCTGGAGGTAGTCAGACTGTGAACGTGCCTATCACC
CAGATCCCATTGCCGGACAGTATACAAATGACAAATGGCGCTACGGGCCCTTCCAATGGCAATCTCATACTTGCC
AATTCAGGTCGTGGAACGATACCATCTACAATTGCGTTGGTCAACTCAAAACCGCCTCATAATGCTACGTTCACC
CGACAAGTGGAAATCTTTTCTTTACGGATACCATCTATGGCTTCCTTAACAGATTCCTGCTCAGATGGGAAAACC
GCGTACATTGCCGATACAGGCGCTTCGGGCGGAAAGCCAACTGAACCGGGTACAGTTTACGCGTTTGATGTCGAT
CCAACGACGGAAACATTTTTGAACCGTCGGATACTGGCCTATATCGACGCAGGCGTACCCGATGGACTTCAAGTT
GATGTAAACGGAAATGTGTATACCGCTTGCGCTGATGGTGTTCAAGTGTTTGATGCGGATGGTACGCTTCTTGGG
AAATTCTTTTTGGACATCTCTAGTGCCAACATGGTCTTTGCGGGCCCTGGCAGAATGGTTATTTTAGCAGAGACA
AAGGTGTTTTTAGCAAAGATTGCGCCGACCACCAAAGGCGTCGTTTCTTAA
Transcript >Agabi119p4|031500
ATGATGACGATCACCATTTCGGTTGCTTTACTCGGGGCCTCCATTGCATACGCAAATATACATCAAGGCAGAGCT
GTAAATGCCGGTCTCCCGCCTCAATCAGTTTTAGTAGACCCAAAATCATTCGCCGTCCTCCCCGACGACTTCAGT
TACCGTACCGACAGTTTCAACCAACATTTCAACCCAACCAATTCCCAGGACTTTCCCACATTTCAAGTATTTAAC
GGGGCTTTCCTCGACATCATAGGATCATCTCCTTCCATATCGGAAATTGCATCCAATTCGTCTTTTGCTTTTGCT
CATGAAGCACCTGACCACTGGGCGGAGCAAATGTTGAGTTCTGGAGGTAGTCAGACTGTGAACGTGCCTATCACC
CAGATCCCATTGCCGGACAGTATACAAATGACAAATGGCGCTACGGGCCCTTCCAATGGCAATCTCATACTTGCC
AATTCAGGTCGTGGAACGATACCATCTACAATTGCGTTGGTCAACTCAAAACCGCCTCATAATGCTACGTTCACC
CGACAAGTGGAAATCTTTTCTTTACGGATACCATCTATGGCTTCCTTAACAGATTCCTGCTCAGATGGGAAAACC
GCGTACATTGCCGATACAGGCGCTTCGGGCGGAAAGCCAACTGAACCGGGTACAGTTTACGCGTTTGATGTCGAT
CCAACGACGGAAACATTTTTGAACCGTCGGATACTGGCCTATATCGACGCAGGCGTACCCGATGGACTTCAAGTT
GATGTAAACGGAAATGTGTATACCGCTTGCGCTGATGGTGTTCAAGTGTTTGATGCGGATGGTACGCTTCTTGGG
AAATTCTTTTTGGACATCTCTAGTGCCAACATGGTCTTTGCGGGCCCTGGCAGAATGGTTATTTTAGCAGAGACA
AAGGTGTTTTTAGCAAAGATTGCGCCGACCACCAAAGGCGTCGTTTCTTAA
Gene >Agabi119p4|031500
ATGATGACGATCACCATTTCGGTTGCTTTACTCGGGGCCTCCATTGCATACGCAAATATACATCAAGGCAGAGCT
GTAAATGCCGGTCTCCCGCCTCAATCAGTTGTATGTTGCCTTTGAGGCCTTGTTAACCGCTAAACATCATTTCAA
ATCAGTTAGTAGACCCAAAATCATTCGCCGTCCTCCCCGACGACTTCAGTTACCGTACCGACAGTTTCAACCAAC
ATTTCAACCCAACCAATTCCCAGGACTTTCCCACATTTCAAGTATTTAACGGGGCTTTCCTCGACATCATAGGAT
CATCTCCTTCCATATCGGAAATTGCATCCAATTCGTCTTTTGCTTTTGCTCATGAAGCACCTGTATATATTGCGG
AGACGGATGAGGTATTTTTCGCGAGTAATGACGGAGGACCACTGGGTATGAGTGATATCAATCACAACAATGCGT
TTTTCAAGTTGAATTTGACCGAGGCGGAGCAAATGTTGAGTTCTGGAGGTAGTCAGACTGTGAACGTGCCTATCA
CCCAGGTAATAGTCCCTATATACCGAATATATTTCAGGGCTGAATTCTTATTTATTGACAATTTATAGATCCCAT
TGCCGGACAGTATACAAATGACAAATGGCGCTACGGGCCCTTCCAATGGCAATCTCATACTTGCCAATTCAGGTC
GTGGAACGATACCATCTACAATTGCGTTGGTCAACTCAAAACCGCCTCATAATGCTACGGTAATCTTGAATAATT
ACTTTGGACGACAATTCAATTCTCTCAACGATGTCAAAGTTCACCCGACAAGTGGAAATCTTTTCTTTACGGATA
CCATGTACGTGGGGCATACAAATACTCCAATTACCATGTCAGAGCTGATATTATTGGATCACTACAGCTATGGCT
TCCTTAACAGATTCCGTGACACGCCTCTACTTCCGGGTCAAGTATATCGTTTCGATATGGATACCAGTGCTGTTC
GCGTTGTCGCTGACAATATTGATAAACCGAATGGAATTGCATTTACAGCAGATGGGAAAACCGCGTACATGTAAG
TACAATGATTTCTTCTTTCTACATCTAATAGATTTATCTACCAAACACAGTGCCGATACAGGCGCTTCGGGCGGA
AAGCCAACTGAACCGGGTACAGTGTGAGTTATACACCTTTGTTTCTACCATGATTGATCCTCATGCGGGCTGGGA
TTATTGCAACTTAGTTACGCGTTTGATGTCGATCCAACGACGGAAACATTTTTGAACCGTCGGATACTGGCCTAT
ATCGACGCAGGCGTACCCGATGGACTTCAAGTTGATGTAAACGGAAATGTGTATACCGCTTGCGCTGATGGTGTT
CAAGTGCGTAAAGTTCAGCTATACCCATCGTAAATAGCGAGTTTTCATATTCGTATCATCATTTAGGTGTTTGAT
GCGGATGGTACGCTTCTTGGGAAATTCTTTTTGGACATCTCTAGTGCCAACATGGTCTTTGCGGGCCCTGGCAGA
ATGGTTATTTTAGCAGAGACAAAGGTGTTTTTAGCAAAGATTGCGCCGACCACCAAAGGCGTCGTTTCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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