Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|030730
Gene name
Location	scaffold_12:750911..752866
Strand	+
Gene length (bp)	1955
Transcript length (bp)	1734
Coding sequence length (bp)	1734
Protein length (aa)	578

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00789	UBX	UBX domain	1.3E-07	446	544
PF14555	UBA_4	UBA-like domain	7.0E-06	11	49

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q6GQ69\|FAF2B_XENLA	FAS-associated factor 2-B OS=Xenopus laevis GN=faf2-b PE=2 SV=1	4	478	2.0E-16
sp\|O74498\|UCP10_SCHPO	UBX domain-containing protein 10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ucp10 PE=3 SV=1	193	557	3.0E-16
sp\|Q12229\|UBX3_YEAST	UBX domain-containing protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX3 PE=1 SV=1	96	558	4.0E-16
sp\|Q9M0N1\|PUX10_ARATH	Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana GN=PUX10 PE=2 SV=1	199	478	1.0E-15
sp\|Q2HJD0\|FAF2_BOVIN	FAS-associated factor 2 OS=Bos taurus GN=FAF2 PE=2 SV=1	3	478	2.0E-14

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q6GQ69\|FAF2B_XENLA	FAS-associated factor 2-B OS=Xenopus laevis GN=faf2-b PE=2 SV=1	4	478	2.0E-16
sp\|O74498\|UCP10_SCHPO	UBX domain-containing protein 10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ucp10 PE=3 SV=1	193	557	3.0E-16
sp\|Q12229\|UBX3_YEAST	UBX domain-containing protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX3 PE=1 SV=1	96	558	4.0E-16
sp\|Q9M0N1\|PUX10_ARATH	Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana GN=PUX10 PE=2 SV=1	199	478	1.0E-15
sp\|Q2HJD0\|FAF2_BOVIN	FAS-associated factor 2 OS=Bos taurus GN=FAF2 PE=2 SV=1	3	478	2.0E-14
sp\|Q96CS3\|FAF2_HUMAN	FAS-associated factor 2 OS=Homo sapiens GN=FAF2 PE=1 SV=2	3	478	5.0E-14
sp\|Q28BP9\|FAF2_XENTR	FAS-associated factor 2 OS=Xenopus tropicalis GN=faf2 PE=2 SV=1	4	478	8.0E-14
sp\|Q3TDN2\|FAF2_MOUSE	FAS-associated factor 2 OS=Mus musculus GN=Faf2 PE=1 SV=2	3	478	2.0E-12
sp\|Q5BK32\|FAF2_RAT	FAS-associated factor 2 OS=Rattus norvegicus GN=Faf2 PE=2 SV=1	198	478	7.0E-11
sp\|Q6AZH6\|FAF2A_XENLA	FAS-associated factor 2-A OS=Xenopus laevis GN=faf2-a PE=2 SV=1	4	478	8.0E-11

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GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 65	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	93	115	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|030730 MSNLTDSQQRALNQLRELTNGGSDDVSIGVLESTEWDVERAAELIFGGGGLPAPSTSTSAVEAFEVDDSAQRQPP QNQVLPNTRMLYALARPLLSLLAVPLHILSSVVRFIFGILRIPVPQFRFTSLNFYRPQPRRRAGGPDKWVRELEE ELGAVCIGRTKTPRMSTSTTGMQAGPSRVSARNAQSDDCLAEGKKLLPDFIISSYDQFLRTCQREFKIGCVILLT EEHDDTPEFKRATLTNSDFVKALYNNDILAWGGDVRDLEAWNASEKLQATTYPFIAFVALQPKRTPSSSSRSHSS SSPQPVLTVLSRHQGKPYPSSSGPTSAQTLIDHLDRQLLPRVNPFLERLRAQQRERERDRQLRDEQDRAFQEAAR RDKERIEAKIAAEKAETEAKRKAEEVEKAAILKQEQEAAEARQREELRMVWRCWTRKAVVGPMMAAGGGGDFRIA IRLPTGTRVVQSFALTTSLTALYAFVDSQLIPSHFEPKDDPVTPPEGKETGGEKAIEKQIVAVGGATSWWGFQLA MAYPRLEIPWKRDVQLGELSMLKGGGQVVVEMLGSSQSSSEDDGYKTESDEE*
Coding	>Agabi119p4\|030730 ATGAGCAACCTCACCGACAGCCAACAACGCGCCCTCAACCAGCTCCGCGAGCTCACGAATGGGGGCAGCGACGAC GTATCGATTGGCGTGCTCGAGAGCACCGAGTGGGATGTCGAGCGGGCAGCTGAACTGATATTCGGCGGCGGTGGA CTTCCTGCGCCGAGCACGTCTACGTCTGCTGTCGAGGCTTTCGAGGTCGACGACAGCGCACAGCGCCAGCCACCG CAGAACCAGGTCCTCCCAAATACTCGGATGCTCTATGCACTGGCTCGGCCGCTGCTGTCGCTGCTCGCAGTTCCT CTTCACATCCTTTCTAGCGTCGTTCGCTTCATCTTTGGCATCCTCCGCATTCCTGTTCCCCAGTTCCGTTTCACT TCCCTCAACTTTTACCGCCCGCAGCCAAGGCGTCGAGCGGGTGGCCCCGATAAATGGGTCAGAGAACTCGAAGAA GAGCTCGGCGCCGTGTGTATCGGCCGCACCAAAACCCCACGTATGTCTACTTCGACAACGGGGATGCAAGCTGGT CCGTCACGGGTGTCGGCGCGTAATGCGCAGTCAGACGATTGTTTGGCTGAAGGCAAGAAACTCTTGCCCGATTTT ATCATTTCTAGCTATGACCAATTCTTGCGAACTTGTCAGCGAGAATTCAAGATTGGCTGTGTCATTCTTTTGACG GAAGAGCACGACGACACTCCAGAATTCAAAAGGGCGACCCTCACCAACTCTGACTTTGTGAAAGCTCTCTACAAC AACGATATCCTTGCGTGGGGTGGAGATGTGCGTGACCTCGAGGCCTGGAATGCCTCTGAAAAGCTTCAAGCAACG ACGTATCCTTTTATTGCCTTTGTGGCTTTACAACCCAAACGAACACCTTCATCTTCATCGCGCTCACACTCGTCC AGCTCTCCACAACCAGTCCTCACTGTCCTCTCTCGCCACCAAGGCAAACCTTATCCCTCCAGCTCAGGCCCTACA TCTGCCCAAACCCTCATAGACCATCTTGATCGACAACTTTTACCCCGTGTAAATCCTTTCCTTGAACGACTTCGT GCGCAACAGCGTGAAAGAGAACGAGACCGTCAACTTCGTGACGAACAAGATCGTGCTTTCCAAGAAGCAGCAAGA CGCGACAAGGAACGTATTGAAGCAAAAATTGCTGCGGAAAAAGCAGAGACGGAAGCGAAGCGAAAGGCAGAGGAA GTAGAGAAAGCGGCGATTCTGAAACAGGAACAGGAAGCTGCGGAGGCAAGGCAAAGGGAGGAACTCAGGATGGTT TGGCGGTGTTGGACAAGGAAGGCCGTTGTTGGTCCGATGATGGCGGCTGGAGGTGGAGGAGACTTTCGTATTGCA ATTCGACTTCCAACTGGAACACGCGTTGTGCAAAGTTTTGCATTGACAACAAGTCTAACGGCATTGTATGCCTTT GTCGATTCTCAGCTGATTCCTTCACACTTTGAACCCAAAGATGATCCTGTCACGCCACCAGAAGGTAAAGAGACG GGTGGTGAAAAAGCGATTGAGAAACAGATTGTGGCTGTGGGAGGAGCGACGAGTTGGTGGGGATTCCAGTTGGCG ATGGCTTACCCGAGATTAGAGATACCTTGGAAACGGGATGTTCAGCTTGGAGAATTGTCGATGCTCAAGGGGGGT GGACAGGTTGTTGTTGAGATGTTGGGGAGCTCGCAAAGCTCTTCAGAGGATGATGGCTACAAGACAGAGTCGGAC GAGGAGTAG
Transcript	>Agabi119p4\|030730 ATGAGCAACCTCACCGACAGCCAACAACGCGCCCTCAACCAGCTCCGCGAGCTCACGAATGGGGGCAGCGACGAC GTATCGATTGGCGTGCTCGAGAGCACCGAGTGGGATGTCGAGCGGGCAGCTGAACTGATATTCGGCGGCGGTGGA CTTCCTGCGCCGAGCACGTCTACGTCTGCTGTCGAGGCTTTCGAGGTCGACGACAGCGCACAGCGCCAGCCACCG CAGAACCAGGTCCTCCCAAATACTCGGATGCTCTATGCACTGGCTCGGCCGCTGCTGTCGCTGCTCGCAGTTCCT CTTCACATCCTTTCTAGCGTCGTTCGCTTCATCTTTGGCATCCTCCGCATTCCTGTTCCCCAGTTCCGTTTCACT TCCCTCAACTTTTACCGCCCGCAGCCAAGGCGTCGAGCGGGTGGCCCCGATAAATGGGTCAGAGAACTCGAAGAA GAGCTCGGCGCCGTGTGTATCGGCCGCACCAAAACCCCACGTATGTCTACTTCGACAACGGGGATGCAAGCTGGT CCGTCACGGGTGTCGGCGCGTAATGCGCAGTCAGACGATTGTTTGGCTGAAGGCAAGAAACTCTTGCCCGATTTT ATCATTTCTAGCTATGACCAATTCTTGCGAACTTGTCAGCGAGAATTCAAGATTGGCTGTGTCATTCTTTTGACG GAAGAGCACGACGACACTCCAGAATTCAAAAGGGCGACCCTCACCAACTCTGACTTTGTGAAAGCTCTCTACAAC AACGATATCCTTGCGTGGGGTGGAGATGTGCGTGACCTCGAGGCCTGGAATGCCTCTGAAAAGCTTCAAGCAACG ACGTATCCTTTTATTGCCTTTGTGGCTTTACAACCCAAACGAACACCTTCATCTTCATCGCGCTCACACTCGTCC AGCTCTCCACAACCAGTCCTCACTGTCCTCTCTCGCCACCAAGGCAAACCTTATCCCTCCAGCTCAGGCCCTACA TCTGCCCAAACCCTCATAGACCATCTTGATCGACAACTTTTACCCCGTGTAAATCCTTTCCTTGAACGACTTCGT GCGCAACAGCGTGAAAGAGAACGAGACCGTCAACTTCGTGACGAACAAGATCGTGCTTTCCAAGAAGCAGCAAGA CGCGACAAGGAACGTATTGAAGCAAAAATTGCTGCGGAAAAAGCAGAGACGGAAGCGAAGCGAAAGGCAGAGGAA GTAGAGAAAGCGGCGATTCTGAAACAGGAACAGGAAGCTGCGGAGGCAAGGCAAAGGGAGGAACTCAGGATGGTT TGGCGGTGTTGGACAAGGAAGGCCGTTGTTGGTCCGATGATGGCGGCTGGAGGTGGAGGAGACTTTCGTATTGCA ATTCGACTTCCAACTGGAACACGCGTTGTGCAAAGTTTTGCATTGACAACAAGTCTAACGGCATTGTATGCCTTT GTCGATTCTCAGCTGATTCCTTCACACTTTGAACCCAAAGATGATCCTGTCACGCCACCAGAAGGTAAAGAGACG GGTGGTGAAAAAGCGATTGAGAAACAGATTGTGGCTGTGGGAGGAGCGACGAGTTGGTGGGGATTCCAGTTGGCG ATGGCTTACCCGAGATTAGAGATACCTTGGAAACGGGATGTTCAGCTTGGAGAATTGTCGATGCTCAAGGGGGGT GGACAGGTTGTTGTTGAGATGTTGGGGAGCTCGCAAAGCTCTTCAGAGGATGATGGCTACAAGACAGAGTCGGAC GAGGAGTAG
Gene	>Agabi119p4\|030730 ATGAGCAACCTCACCGACAGCCAACAACGCGCCCTCAACCAGCTCCGCGAGCTCACGAATGGGGGCAGCGACGAC GTATCGATTGGCGTGCTCGAGAGCACCGAGTGGGATGTCGAGGTATGCAGAGCGGGTGTCCTTGGTGTATTTTGT GTGCTCATTTATTCCCCTCGCAGCGGGCAGCTGAACTGATATTCGGCGGCGGTGGACTTCCTGCGCCGAGCACGT CTACGTCTGCTGTCGAGGCTTTCGAGGTCGACGACAGCGCACAGCGCCAGCCACCGCAGAACCAGGTCCTCCCAG TACGCATCCACGTTCTGTACATATTAATATGTTAGGCTGACAGAGACTACAGAATACTCGGATGCTCTATGCACT GGCTCGGCCGCTGCTGTCGCTGCTCGCAGTTCCTCTTCACATCCTTTCTAGCGTCGTTCGCTTCATCTTTGGCAT CCTCCGCATTCCTGTTCCCCAGTTCCGTTTCACTTCCCTCAACTTTTACCGCCCGCAGCCAAGGCGTCGAGCGGG TGGCCCCGATAAATGGGTCAGAGAACTCGAAGAAGAGCTCGGCGCCGTGTGTATCGGCCGCACCAAAACCCCACG TATGTCTACTTCGACAACGGGGATGCAAGCTGGTCCGTCACGGGTGTCGGCGCGTAATGCGCAGTCAGACGATTG TTTGGCTGAAGGCAAGAAACTCTTGCCCGATTTTATCATTTCTAGCTATGACCAATTCTTGCGAACTTGTCAGCG AGAATTCAAGATTGGCTGTGTCATTCTTTTGACGGAAGAGCACGACGACACTCCAGAATTCAAAAGGTAATGAAC GAATTTTTGTGTTTTCTCTTCACTGGTTGAATCAAATTTCAATATTTAGGGCGACCCTCACCAACTCTGACTTTG TGAAAGCTCTCTACAACAACGATATCCTTGCGTGGGGTGGAGATGTGCGTGACCTCGAGGCCTGGAATGGTGCGT CGGATGTTTCGCCTCAATAGAGTTTCATTTCAACTTTGGTCTTTTTAGCCTCTGAAAAGCTTCAAGCAACGACGT ATCCTTTTATTGCCTTTGTGGCTTTACAACCCAAACGAACACCTTCATCTTCATCGCGCTCACACTCGTCCAGCT CTCCACAACCAGTCCTCACTGTCCTCTCTCGCCACCAAGGCAAACCTTATCCCTCCAGCTCAGGCCCTACATCTG CCCAAACCCTCATAGACCATCTTGATCGACAACTTTTACCCCGTGTAAATCCTTTCCTTGAACGACTTCGTGCGC AACAGCGTGAAAGAGAACGAGACCGTCAACTTCGTGACGAACAAGATCGTGCTTTCCAAGAAGCAGCAAGACGCG ACAAGGAACGTATTGAAGCAAAAATTGCTGCGGAAAAAGCAGAGACGGAAGCGAAGCGAAAGGCAGAGGAAGTAG AGAAAGCGGCGATTCTGAAACAGGAACAGGAAGCTGCGGAGGCAAGGCAAAGGGAGGAACTCAGGATGGTTTGGC GGTGTTGGACAAGGAAGGCCGTTGTTGGTCCGATGATGGCGGCTGGAGGTGGAGGAGACTTTCGTATTGCAATTC GACTTCCAACTGGAACACGCGTTGTGCAAAGTTTTGCATTGACAACAAGTCTAACGGCATTGTATGCCTTTGTCG ATTCTCAGCTGATTCCTTCACACTTTGAACCCAAAGATGATCCTGTCACGCCACCAGAAGGTAAAGAGACGGGTG GTGAAAAAGCGATTGAGAAACAGATTGTGGCTGTGGGAGGAGCGACGAGTTGGTGGGGATTCCAGTTGGCGATGG CTTACCCGAGATTAGAGATACCTTGGAAACGGGATGTTCAGCTTGGAGAATTGTCGATGCTCAAGGGGGGTGGAC AGGTTGTTGTTGAGATGTTGGGGAGCTCGCAAAGCTCTTCAGAGGATGATGGCTACAAGACAGAGTCGGACGAGG AGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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