© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|030440 |
| Gene name | |
| Location | scaffold_12:639481..640973 |
| Strand | + |
| Gene length (bp) | 1492 |
| Transcript length (bp) | 1074 |
| Coding sequence length (bp) | 1074 |
| Protein length (aa) | 358 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00775 | Dioxygenase_C | Dioxygenase | 2.4E-07 | 123 | 250 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006725 | cellular aromatic compound metabolic process | Yes |
| GO:0003824 | catalytic activity | Yes |
| GO:0008199 | ferric iron binding | Yes |
| GO:0043169 | cation binding | No |
| GO:0005506 | iron ion binding | No |
| GO:0043167 | ion binding | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0046872 | metal ion binding | No |
| GO:0008150 | biological_process | No |
| GO:0008152 | metabolic process | No |
| GO:0005488 | binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|030440 MRALTNLLFSLSLAAALVAAHKEPKSQEEVEIQRALQAAAYHCAPAVERYTAARKRSWAQKVLAGRPELPGYQDL FSSDIYDDVEVGTLPTPEDDSQTIMGCTPVSTSTIQNNTCVLSPVVTEGPYFHEAGHPIRQNIAETQDGLLLLLD IGVIDVNTCKPLPNVLVDIWQANATGYYAGHPVPRPEELTVKPQVGGKRSGLLPPFPRTINHETFLRGAWPTDGN GVAQFTTIFPGYYTGRATHIHAKVFPEWTTHPNGSYTGDRLVHVGQFFFEDEMNLVVDKMHPYTENPIRDTYGRT RNWRDSLNIFEDSFGPEGKYNPVFTTHLLGGVVRQGLMGYITIGVNGSTDLENQWRG* |
| Coding | >Agabi119p4|030440 ATGCGAGCACTCACGAACCTGCTATTCTCGCTTTCACTTGCAGCTGCGTTGGTTGCAGCCCACAAAGAGCCTAAG AGTCAGGAGGAAGTTGAGATCCAACGGGCGCTGCAGGCTGCTGCATATCATTGTGCACCAGCCGTCGAACGCTAC ACTGCTGCACGTAAACGGTCATGGGCGCAGAAAGTTCTGGCCGGTCGACCGGAATTACCGGGTTATCAAGATCTC TTCAGTTCCGATATTTACGACGATGTTGAAGTAGGGACATTGCCGACTCCTGAGGACGACAGTCAGACCATCATG GGATGTACTCCGGTGTCGACTTCCACAATCCAAAATAATACGTGTGTTCTCTCACCGGTGGTCACGGAGGGCCCT TATTTCCATGAAGCCGGGCATCCCATTCGACAGAATATTGCAGAGACTCAAGACGGATTGTTGCTGCTTCTTGAT ATTGGAGTCATAGATGTCAATACTTGCAAGCCCCTTCCAAATGTTCTTGTGGACATCTGGCAAGCAAATGCCACA GGCTATTATGCTGGGCATCCTGTGCCCCGACCAGAGGAGCTAACAGTCAAACCTCAAGTGGGTGGCAAGCGATCC GGCCTTCTCCCACCATTCCCGCGAACAATCAACCATGAGACTTTCTTACGTGGTGCTTGGCCGACTGACGGGAAT GGCGTGGCTCAATTTACCACCATTTTCCCGGGCTATTACACAGGTCGAGCGACGCATATCCACGCCAAAGTATTC CCGGAGTGGACAACGCATCCAAATGGAAGTTATACTGGCGACCGCTTGGTGCATGTGGGCCAGTTCTTCTTTGAA GATGAAATGAATTTGGTTGTCGACAAGATGCACCCATATACAGAAAACCCCATCAGAGATACTTATGGCCGAACG CGCAATTGGCGTGATTCGCTTAATATCTTCGAAGATTCTTTTGGGCCTGAAGGTAAATACAACCCTGTATTTACA ACCCACCTTTTGGGAGGTGTCGTGAGGCAAGGATTGATGGGTTATATCACTATCGGTGTAAATGGTAGTACAGAC CTTGAGAACCAGTGGCGAGGTTAA |
| Transcript | >Agabi119p4|030440 ATGCGAGCACTCACGAACCTGCTATTCTCGCTTTCACTTGCAGCTGCGTTGGTTGCAGCCCACAAAGAGCCTAAG AGTCAGGAGGAAGTTGAGATCCAACGGGCGCTGCAGGCTGCTGCATATCATTGTGCACCAGCCGTCGAACGCTAC ACTGCTGCACGTAAACGGTCATGGGCGCAGAAAGTTCTGGCCGGTCGACCGGAATTACCGGGTTATCAAGATCTC TTCAGTTCCGATATTTACGACGATGTTGAAGTAGGGACATTGCCGACTCCTGAGGACGACAGTCAGACCATCATG GGATGTACTCCGGTGTCGACTTCCACAATCCAAAATAATACGTGTGTTCTCTCACCGGTGGTCACGGAGGGCCCT TATTTCCATGAAGCCGGGCATCCCATTCGACAGAATATTGCAGAGACTCAAGACGGATTGTTGCTGCTTCTTGAT ATTGGAGTCATAGATGTCAATACTTGCAAGCCCCTTCCAAATGTTCTTGTGGACATCTGGCAAGCAAATGCCACA GGCTATTATGCTGGGCATCCTGTGCCCCGACCAGAGGAGCTAACAGTCAAACCTCAAGTGGGTGGCAAGCGATCC GGCCTTCTCCCACCATTCCCGCGAACAATCAACCATGAGACTTTCTTACGTGGTGCTTGGCCGACTGACGGGAAT GGCGTGGCTCAATTTACCACCATTTTCCCGGGCTATTACACAGGTCGAGCGACGCATATCCACGCCAAAGTATTC CCGGAGTGGACAACGCATCCAAATGGAAGTTATACTGGCGACCGCTTGGTGCATGTGGGCCAGTTCTTCTTTGAA GATGAAATGAATTTGGTTGTCGACAAGATGCACCCATATACAGAAAACCCCATCAGAGATACTTATGGCCGAACG CGCAATTGGCGTGATTCGCTTAATATCTTCGAAGATTCTTTTGGGCCTGAAGGTAAATACAACCCTGTATTTACA ACCCACCTTTTGGGAGGTGTCGTGAGGCAAGGATTGATGGGTTATATCACTATCGGTGTAAATGGTAGTACAGAC CTTGAGAACCAGTGGCGAGGTTAA |
| Gene | >Agabi119p4|030440 ATGCGAGCACTCACGAACCTGCTATTCTCGCTTTCACTTGCAGCTGCGTTGGTTGCAGCCCACAAAGAGCCTAAG AGTCAGGAGGAAGTTGAGATCCAACGGGCGCTGCAGGCTGCTGCATATCATGTGAGCCTTATTTGGTCATGTTCA CCTCCTCTCTCTGACCGCCACTCACAGTGTGCACCAGCCGTCGAACGCTACACTGCTGCACGTAAACGGTCATGG GCGCAGAAAGTTCTGGCCGGTCGACCGGAATTACCGGGTTATCAAGATCTCTTCAGTTCCGATATTTACGACGAT GTTGAAGTAGGGACATTGCCGACTCCTGAGGACGACAGTCAGACCATCATGGGATGTACTCCGGTGTCGACTTCC ACAATCCAAAATAATACGTGTGTTCTCTCACCGGTGGTCACGGAGGGCCCTTATTTCCATGAAGCCGGGCATCCC ATTCGACAGAATATTGCAGAGACTCAAGACGGATTGTTGCTGGTGTGTGATGTTTCGTACCTTGTTTGGCATCTT GTCCTCCTAAAAACGCTACATAGCTTCTTGATATTGGAGTCATAGATGTCAATACTTGCAAGCCCCTTCCAAATG TTCTTGTGGACATCTGGCAAGCAAATGCCACAGGCTATTATGCTGGTATGTCTTATCCCCTTTTCTATAGTCTCC AAGCCTCATTATACTTCGTTCAGGGCATCCTGTGCCCCGACCAGAGGAGCTAACAGTCAAACCTCAAGTGGGTGG CAAGCGATCCGGCCTTCTCCCACCATTCCCGCGAACAATCAACCATGAGACTTTCTTACGTGGTGCTTGGCCGAC TGACGGGAATGGCGTGGCTCAATTTACCAGTACGTTGTCCTTGTCAAAGTGGGGCGGGAGATTTCCCAAACTGAC GTTTTTGCCAAACCAGCCATTTTCCCGGGCTATTACACAGGTCGAGCGACGCATATCCACGCCAAAGTATTCCCG GAGTGGACAACGCATCCAAATGGAAGTTATACTGGCGACCGCTTGGTGCATGTGGGCCAGTTCTTCTTTGAAGAT GAAATGAATTTGGTTGTCGACAAGGTGAGTTACAGGTATTCTGGCAAGATTGGGAAGAAACCTTCCGGTGTATAA TTCGACCTCACCAACATTATTGTTCTATTTCTGGCTACGCCATATTTTTGATCTGTGCCTTGCCTAGTCGACTGG GCTAACCCGTTTTCAGATGCACCCATATACAGAAAACCCCATCAGAGATACTTATGGCCGAACGCGCAATTGGCG TGATTCGCTTAATATCTTCGAAGATTCTTTTGGGCCTGAAGGTAAATACAACCCTGTATTTACAACCCACCTTTT GGGAGGTGTCGTGAGGCAAGGATTGATGGGTTATATCACTATCGTAAGTTTCGTGATCATCACTCTTAACTCTTG AGTATTGATGCATCGTTATTAGGGTGTAAATGGTAGTACAGACCTTGAGAACCAGTGGCGAGGTTAA |