© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|030430 |
| Gene name | |
| Location | scaffold_12:636863..638258 |
| Strand | + |
| Gene length (bp) | 1395 |
| Transcript length (bp) | 1032 |
| Coding sequence length (bp) | 1032 |
| Protein length (aa) | 344 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00775 | Dioxygenase_C | Dioxygenase | 1.1E-07 | 135 | 274 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006725 | cellular aromatic compound metabolic process | Yes |
| GO:0003824 | catalytic activity | Yes |
| GO:0008199 | ferric iron binding | Yes |
| GO:0043169 | cation binding | No |
| GO:0005506 | iron ion binding | No |
| GO:0043167 | ion binding | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0046872 | metal ion binding | No |
| GO:0008150 | biological_process | No |
| GO:0008152 | metabolic process | No |
| GO:0005488 | binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 20 | 0.99872 |
| Orthofinder run ID | 5 |
| Orthogroup | 2623 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Agaricus bisporus var bisporus H39 | AgabiH39|030430 |
| Agaricus bisporus var bisporus H97 | AgabiH97|030430 |
| Agaricus bisporus var burnettii H119p4 | Agabi119p4|030430 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|030430 MLLLASLFVSLLSTTCFVSAHKEPKTPEEIQVQRALQAAAYYCSPTVDQFTAARKRAWARKINAGRGELPSHQKM FLNNMYEIGQGSLAVPARLEDDDIDMSCTPISTTEIQNNTCVLAPEVTEGPYWHEVGHPIRRNIAEYQDGLLLLL DIGVIDVETCKPLPNALVDLWQTNATGDYSGHPAVSRFVNNNPLPPSFPRTLPEETWLRGAWPTDENGVAQFTTI FPGYYQGRATHIHAKVFPEWKVLKNNTFMGSRVVHVGQFFFDDEINTVVDKMHPYTENPIAKTWGRTPNWRDSYN IFEDAIGPEGKYNPIFKMHLLGGVVRQGLIGYITMGVNASANF* |
| Coding | >Agabi119p4|030430 ATGCTCTTACTCGCCTCTCTCTTCGTGTCTTTATTATCCACCACATGCTTCGTCTCAGCTCACAAAGAACCAAAA ACTCCTGAAGAGATCCAAGTCCAACGTGCACTCCAAGCTGCCGCCTATTACTGTTCACCCACAGTGGACCAGTTC ACAGCAGCGCGGAAGCGAGCATGGGCACGGAAAATCAATGCGGGCCGGGGAGAATTACCCAGTCACCAGAAAATG TTCTTGAACAACATGTATGAAATTGGTCAAGGCTCGCTTGCGGTTCCAGCACGATTGGAAGATGATGATATTGAT ATGAGTTGCACACCTATTTCAACAACGGAAATTCAGAATAACACTTGTGTTCTTGCTCCTGAAGTTACTGAAGGT CCATACTGGCACGAAGTGGGACACCCCATACGGCGGAATATCGCGGAGTATCAGGACGGTTTGTTGCTGCTACTT GACATCGGAGTTATAGATGTCGAAACCTGCAAGCCTCTTCCGAACGCCTTGGTAGATTTATGGCAGACTAATGCT ACAGGGGATTATTCTGGCCACCCCGCCGTATCTCGATTCGTCAACAATAATCCTCTTCCGCCCTCGTTTCCTCGT ACGCTACCAGAAGAAACCTGGTTACGAGGTGCATGGCCCACCGACGAGAATGGTGTCGCCCAATTCACTACCATA TTTCCGGGCTACTATCAAGGGCGTGCCACACATATCCATGCCAAAGTCTTTCCCGAATGGAAGGTTCTCAAGAAT AATACCTTCATGGGCTCAAGAGTTGTCCATGTCGGACAATTCTTTTTTGATGACGAAATCAATACGGTTGTCGAT AAGATGCATCCTTATACCGAGAATCCAATTGCAAAAACGTGGGGTCGAACGCCTAATTGGCGTGACTCCTACAAT ATTTTCGAGGATGCTATTGGACCTGAGGGAAAATATAACCCCATCTTCAAAATGCATTTGTTGGGTGGCGTCGTG AGACAAGGTTTAATTGGTTATATTACAATGGGTGTCAATGCCAGTGCGAATTTTTGA |
| Transcript | >Agabi119p4|030430 ATGCTCTTACTCGCCTCTCTCTTCGTGTCTTTATTATCCACCACATGCTTCGTCTCAGCTCACAAAGAACCAAAA ACTCCTGAAGAGATCCAAGTCCAACGTGCACTCCAAGCTGCCGCCTATTACTGTTCACCCACAGTGGACCAGTTC ACAGCAGCGCGGAAGCGAGCATGGGCACGGAAAATCAATGCGGGCCGGGGAGAATTACCCAGTCACCAGAAAATG TTCTTGAACAACATGTATGAAATTGGTCAAGGCTCGCTTGCGGTTCCAGCACGATTGGAAGATGATGATATTGAT ATGAGTTGCACACCTATTTCAACAACGGAAATTCAGAATAACACTTGTGTTCTTGCTCCTGAAGTTACTGAAGGT CCATACTGGCACGAAGTGGGACACCCCATACGGCGGAATATCGCGGAGTATCAGGACGGTTTGTTGCTGCTACTT GACATCGGAGTTATAGATGTCGAAACCTGCAAGCCTCTTCCGAACGCCTTGGTAGATTTATGGCAGACTAATGCT ACAGGGGATTATTCTGGCCACCCCGCCGTATCTCGATTCGTCAACAATAATCCTCTTCCGCCCTCGTTTCCTCGT ACGCTACCAGAAGAAACCTGGTTACGAGGTGCATGGCCCACCGACGAGAATGGTGTCGCCCAATTCACTACCATA TTTCCGGGCTACTATCAAGGGCGTGCCACACATATCCATGCCAAAGTCTTTCCCGAATGGAAGGTTCTCAAGAAT AATACCTTCATGGGCTCAAGAGTTGTCCATGTCGGACAATTCTTTTTTGATGACGAAATCAATACGGTTGTCGAT AAGATGCATCCTTATACCGAGAATCCAATTGCAAAAACGTGGGGTCGAACGCCTAATTGGCGTGACTCCTACAAT ATTTTCGAGGATGCTATTGGACCTGAGGGAAAATATAACCCCATCTTCAAAATGCATTTGTTGGGTGGCGTCGTG AGACAAGGTTTAATTGGTTATATTACAATGGGTGTCAATGCCAGTGCGAATTTTTGA |
| Gene | >Agabi119p4|030430 ATGCTCTTACTCGCCTCTCTCTTCGTGTCTTTATTATCCACCACATGCTTCGTCTCAGCTCACAAAGAACCAAAA ACTCCTGAAGAGATCCAAGTCCAACGTGCACTCCAAGCTGCCGCCTATTACGTGAGAGTTTCACCCCACATTTGT TTCTCGGTGGGGCTGACGGATCAATGGTAGTGTTCACCCACAGTGGACCAGTTCACAGCAGCGCGGAAGCGAGCA TGGGCACGGAAAATCAATGCGGGCCGGGGAGAATTACCCAGTCACCAGAAAATGTTCTTGAACAACATGTATGAA ATTGGTCAAGGCTCGCTTGCGGTTCCAGCACGATTGGAAGATGATGATATTGATATGAGTTGCACACCTATTTCA ACAACGGAAATTCAGAATAACACTTGTGTTCTTGCTCCTGAAGTTACTGAAGGTCCATACTGGCACGAAGTGGGA CACCCCATACGGCGGAATATCGCGGAGTATCAGGACGGTTTGTTGCTGGTTCGTGAGCTGAATTTGATTCCAAAC GGAGTTGGCGCATTGCTCACTGGTATGACGTCAAATTCTAGCTACTTGACATCGGAGTTATAGATGTCGAAACCT GCAAGCCTCTTCCGAACGCCTTGGTAGATTTATGGCAGACTAATGCTACAGGGGATTATTCTGGTATGTCGGTTT GTTGATATGACGGCGTTCATATTGAGAGAACTGACCCATCACGATTGTTTCTCTGGTTAGGCCACCCCGCCGTAT CTCGATTCGTCAACAATAATCCTCTTCCGCCCTCGTTTCCTCGTACGCTACCAGAAGAAACCTGGTTACGAGGTG CATGGCCCACCGACGAGAATGGTGTCGCCCAATTCACTAGTATGTTTACTCACTCATCCCTTCTTTCGCTCTCAT TCTCTAACTATCATCGTTCAAGCCATATTTCCGGGCTACTATCAAGGGCGTGCCACACATATCCATGCCAAAGTC TTTCCCGAATGGAAGGTTCTCAAGAATAATACCTTCATGGGCTCAAGAGTTGTCCATGTCGGACAATTCTTTTTT GATGACGAAATCAATACGGTTGTCGATAAGGTACGTGTGGAAAATACCACTAGACACTACTGTCATTGACTCCGG TTTAGATGCATCCTTATACCGAGAATCCAATTGCAAAAACGTGGGGTCGAACGCCTAATTGGCGTGACTCCTACA ATATTTTCGAGGATGCTATTGGACCTGAGGGAAAATATAACCCCATCTTCAAAATGCATTTGTTGGGTGGCGTCG TGAGACAAGGTTTAATTGGTTATATTACAATGGTAAGTTCACCGGTATAGTGTATGTTGCTATGAAGGTTGAAAA CCTGAAACCATTTTCTAGGGTGTCAATGCCAGTGCGAATTTTTGA |