Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|029740
Gene name
Locationscaffold_12:459490..461493
Strand+
Gene length (bp)2003
Transcript length (bp)1242
Coding sequence length (bp)1242
Protein length (aa) 414

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PFAM Domains

(None)

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9USW3|YHZ7_SCHPO Probable glycosidase C21B10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC21B10.07 PE=3 SV=1 27 282 3.0E-39
sp|D4AJR9|EGLX_ARTBC Endo-1,3(4)-beta-glucanase ARB_04519 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04519 PE=3 SV=1 6 282 5.0E-33
sp|Q2UIE6|EGLX_ASPOR Probable endo-1,3(4)-beta-glucanase AO090023000083 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=AO090023000083 PE=3 SV=1 47 296 1.0E-30
sp|A1DHY9|EGLX_NEOFI Probable endo-1,3(4)-beta-glucanase NFIA_089530 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_089530 PE=3 SV=1 57 282 1.0E-30
sp|Q4X084|EGLX_ASPFU Probable endo-1,3(4)-beta-glucanase AFUA_2G14360 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=AFUA_2G14360 PE=3 SV=1 52 282 5.0E-30
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Swissprot ID Swissprot Description Start End E-value
sp|Q9USW3|YHZ7_SCHPO Probable glycosidase C21B10.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC21B10.07 PE=3 SV=1 27 282 3.0E-39
sp|D4AJR9|EGLX_ARTBC Endo-1,3(4)-beta-glucanase ARB_04519 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04519 PE=3 SV=1 6 282 5.0E-33
sp|Q2UIE6|EGLX_ASPOR Probable endo-1,3(4)-beta-glucanase AO090023000083 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=AO090023000083 PE=3 SV=1 47 296 1.0E-30
sp|A1DHY9|EGLX_NEOFI Probable endo-1,3(4)-beta-glucanase NFIA_089530 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_089530 PE=3 SV=1 57 282 1.0E-30
sp|Q4X084|EGLX_ASPFU Probable endo-1,3(4)-beta-glucanase AFUA_2G14360 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=AFUA_2G14360 PE=3 SV=1 52 282 5.0E-30
sp|B0XTU6|EGLX_ASPFC Probable endo-1,3(4)-beta-glucanase AFUB_029980 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_029980 PE=3 SV=1 52 282 5.0E-30
sp|A2QBQ3|EGLX_ASPNC Probable endo-1,3(4)-beta-glucanase An02g00850 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An02g00850 PE=3 SV=1 43 282 1.0E-28
sp|B8N7S7|EGLX_ASPFN Probable endo-1,3(4)-beta-glucanase AFLA_105200 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=AFLA_105200 PE=3 SV=1 47 282 5.0E-28
sp|Q5BAP5|EGLX_EMENI Endo-1,3(4)-beta-glucanase xgeA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=xgeA PE=3 SV=1 57 287 7.0E-28
sp|A1C7B5|EGLX_ASPCL Probable endo-1,3(4)-beta-glucanase ACLA_073210 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ACLA_073210 PE=3 SV=1 57 309 6.0E-27
sp|Q751F9|ELOC_ASHGO Elongin-C OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ELC1 PE=3 SV=1 315 413 5.0E-11
sp|Q9USX9|ELOC_SCHPO Elongin-C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=elc1 PE=3 SV=1 313 412 6.0E-10
sp|P83941|ELOC_RAT Transcription elongation factor B polypeptide 1 OS=Rattus norvegicus GN=Tceb1 PE=1 SV=1 297 410 3.0E-06
sp|P83940|ELOC_MOUSE Transcription elongation factor B polypeptide 1 OS=Mus musculus GN=Tceb1 PE=1 SV=1 297 410 3.0E-06
sp|Q15369|ELOC_HUMAN Transcription elongation factor B polypeptide 1 OS=Homo sapiens GN=TCEB1 PE=1 SV=1 297 410 3.0E-06
sp|Q2KII4|ELOC_BOVIN Transcription elongation factor B polypeptide 1 OS=Bos taurus GN=TCEB1 PE=3 SV=1 297 410 3.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|029740
MALLLTWILDDNTSNGDTIFLSAESASTQRLAYIDSTTNRAIIKVDNTSFVPWNYKRNSVRISTKATYGIGSVFV
VDLWHAPYGCSVWPAVWTFSPTSLWPAGGEMDLFEGINLSPHSQMGLHTTAGCTQLLPKQTSKITNGTNCEGSTG
CIVTNDSPASYGPDFANARGGVFVGELSETGVSIWFFERSKVPDVLSNNASKIDTSAFGTPTGNWPSGGCQIDKY
FEPQTLVFDITLCGDFAGSPQFFPTTCTGNCYLDYVINNGTQQYANAFFDVGYVRVFSANNTGPSLTVVQQNGGE
RNQASTPAPENNDWVRITSIDGYSFIVRRKIAKASGTMKSMLDMSSSYAEAATKTCPSGQRAIIAEKLIEYMSFK
AHYETVGPKEDIPLHEFMERLPREIVLELLVAADYQEM*
Coding >Agabi119p4|029740
ATGGCCTTGTTATTGACATGGATATTAGATGATAACACTAGTAACGGTGATACTATATTCCTCTCGGCAGAAAGT
GCCTCAACCCAACGTCTCGCATATATCGACTCTACGACAAACCGCGCAATCATCAAAGTTGATAATACGAGTTTC
GTCCCTTGGAATTATAAGAGAAATTCGGTGAGGATCTCGACGAAGGCTACGTATGGTATTGGGTCGGTCTTTGTA
GTTGATCTTTGGCATGCACCTTATGGCTGTTCGGTTTGGCCTGCTGTGTGGACATTTTCGCCTACCTCATTATGG
CCTGCAGGGGGTGAAATGGACTTATTTGAAGGCATCAATCTCTCGCCGCATTCTCAGATGGGATTACATACCACC
GCTGGATGCACACAACTTCTCCCAAAACAAACGTCGAAAATCACCAATGGAACGAATTGCGAGGGATCTACCGGG
TGTATCGTCACTAATGACAGTCCAGCTTCGTATGGCCCTGATTTCGCGAACGCGCGAGGTGGAGTATTCGTAGGT
GAACTTTCAGAGACTGGAGTATCAATATGGTTCTTTGAACGTTCCAAAGTGCCCGATGTGTTGAGCAATAACGCA
AGCAAGATCGACACATCAGCATTCGGGACACCGACAGGAAATTGGCCTTCTGGTGGGTGTCAAATTGATAAATAT
TTTGAACCCCAAACGCTGGTGTTTGATATTACGCTCTGCGGAGACTTTGCTGGATCTCCTCAATTCTTTCCGACG
ACGTGTACGGGGAATTGTTATCTGGACTACGTGATAAATAATGGGACGCAGCAATATGCAAATGCGTTTTTCGAC
GTGGGCTATGTCCGGGTCTTTAGCGCGAATAATACAGGTCCTTCGTTGACGGTGGTGCAGCAGAATGGGGGTGAG
CGGAATCAAGCGAGCACACCGGCACCGGAGAATAATGATTGGGTCCGCATCACTAGCATTGATGGCTATTCTTTT
ATCGTACGGCGAAAGATTGCCAAGGCAAGCGGAACAATGAAGAGCATGCTAGACATGTCAAGCAGTTATGCGGAA
GCGGCAACCAAGACGTGTCCTTCTGGTCAACGAGCTATTATAGCTGAAAAGTTAATCGAATATATGAGTTTCAAA
GCCCATTACGAGACCGTTGGACCGAAGGAGGATATCCCACTACACGAGTTTATGGAGCGTCTACCCAGAGAGATC
GTTTTAGAACTGTTGGTCGCGGCTGACTACCAAGAAATGTAA
Transcript >Agabi119p4|029740
ATGGCCTTGTTATTGACATGGATATTAGATGATAACACTAGTAACGGTGATACTATATTCCTCTCGGCAGAAAGT
GCCTCAACCCAACGTCTCGCATATATCGACTCTACGACAAACCGCGCAATCATCAAAGTTGATAATACGAGTTTC
GTCCCTTGGAATTATAAGAGAAATTCGGTGAGGATCTCGACGAAGGCTACGTATGGTATTGGGTCGGTCTTTGTA
GTTGATCTTTGGCATGCACCTTATGGCTGTTCGGTTTGGCCTGCTGTGTGGACATTTTCGCCTACCTCATTATGG
CCTGCAGGGGGTGAAATGGACTTATTTGAAGGCATCAATCTCTCGCCGCATTCTCAGATGGGATTACATACCACC
GCTGGATGCACACAACTTCTCCCAAAACAAACGTCGAAAATCACCAATGGAACGAATTGCGAGGGATCTACCGGG
TGTATCGTCACTAATGACAGTCCAGCTTCGTATGGCCCTGATTTCGCGAACGCGCGAGGTGGAGTATTCGTAGGT
GAACTTTCAGAGACTGGAGTATCAATATGGTTCTTTGAACGTTCCAAAGTGCCCGATGTGTTGAGCAATAACGCA
AGCAAGATCGACACATCAGCATTCGGGACACCGACAGGAAATTGGCCTTCTGGTGGGTGTCAAATTGATAAATAT
TTTGAACCCCAAACGCTGGTGTTTGATATTACGCTCTGCGGAGACTTTGCTGGATCTCCTCAATTCTTTCCGACG
ACGTGTACGGGGAATTGTTATCTGGACTACGTGATAAATAATGGGACGCAGCAATATGCAAATGCGTTTTTCGAC
GTGGGCTATGTCCGGGTCTTTAGCGCGAATAATACAGGTCCTTCGTTGACGGTGGTGCAGCAGAATGGGGGTGAG
CGGAATCAAGCGAGCACACCGGCACCGGAGAATAATGATTGGGTCCGCATCACTAGCATTGATGGCTATTCTTTT
ATCGTACGGCGAAAGATTGCCAAGGCAAGCGGAACAATGAAGAGCATGCTAGACATGTCAAGCAGTTATGCGGAA
GCGGCAACCAAGACGTGTCCTTCTGGTCAACGAGCTATTATAGCTGAAAAGTTAATCGAATATATGAGTTTCAAA
GCCCATTACGAGACCGTTGGACCGAAGGAGGATATCCCACTACACGAGTTTATGGAGCGTCTACCCAGAGAGATC
GTTTTAGAACTGTTGGTCGCGGCTGACTACCAAGAAATGTAA
Gene >Agabi119p4|029740
ATGGCCTTGTTATTGACATGGATATTAGATGATAACACTAGTAACGGTGATACTATGTCAGTCCCTTCTCTCTTA
CCTTTTCCATTTGATTGTAGGTGACGCATTGTGGCTGACGATCCGCCGATGTAGATTCCTCTCGGCAGAAAGTGC
CTCAACCCAACGTCTCGCATATATCGACTCTACGACAAACCGCGCAATCATCAAAGTTGATAATACGAGTTTCGT
CCCTTGGAATTATAAGAGAAATTCGGTGAGGATCTCGACGAAGGCTACGTATGGTATTGGGTCGGTCTTTGTAGT
TGATCTTTGGCATGCACCTTATGGCGTGAGTATTTCGCTTTGTTATTTTGTCTCGCATGGGGACTGATGCGTTGA
TATAATAGTGTTCGGTTTGGCCTGCTGTGTGAGTTCATGTATGCGGTCCCCCTTGGGCGTATTATTCATGCCGTG
TTTCATTCATAGGTGGACATTTTCGCCTACCTCATTATGGCCTGCAGGGGGTGAAATGGACTTATTTGAAGGCAT
CAATCTCTCGCCGCATTCTCAGATGGGATTACATACCACCGCTGGATGCACACAACTTCTCCCAAAACAAACGTC
GAAAATCACCAATGGAACGAATTGCGAGGGATCTACCGGGTGTATCGTCACTAATGACAGTCCAGCTTCGTATGG
CCCTGATTTCGCGAACGCGCGAGGTGGAGTATTCGTAGGTGAACTTTCAGAGACTGGAGTATCGTGAGTATTGTA
TTGATATATATCCTAAAAGCATGTCTAAAAGACTGAAATCGCAGAATATGGTTCTTTGAACGTTCCAAAGTGCCC
GATGTGTTGAGCAATAACGCAAGCAAGATCGACACATCAGCATTCGGGACACCGACAGGAAATTGGCCTTCTGGT
GGGTGTCAAATTGATAAATATTTTGAACCCCAAACGCTGGTGTTTGATATTACGCTCTGCGGAGGTGAGGCCTTT
GGTTTCGCGTTTTGTCACTCTGATTTTGACATGCCTAGACTTTGCTGGATCTCCTCAATTCTTTCCGACGACGTG
TACGGGGAATTGTTATCTGGACTACGTGATAAATAATGGGACGCAGCAATATGCAAATGCGTTTTTCGACGTGGG
CTATGTCCGGGTCTTTAGCGCGAATAATACAGGTCCTTCGTTGACGGTGGTGCAGCAGAATGGGGGTGAGCGGGT
GACCATGGCCATTATATGGCTTTCCGTTGTATTTTTACTAGGGGCAGTGTTAGTTTAGATCTGAAATGAGATATT
CAAGCCGATGCACGTGATGTCCATTGACTCGCGTCCATCAAACCATCAGTATCACCCAACTCATGCTGAACCTCG
CGTTTCTAACACTTTTTTAAACATTCTGGTCGTTTATCATGCAGAATCAAGCGAGCACACCGGTATGTTTCGAGC
AAGCGCGCCCTGCATACTCATGTCCACATCCTACACGACAGGCACCGGAGAATAATGATTGGGTCCGCATCACTA
GCATTGATGGCTATTCTTTTATCGTACGGCGAAAGATTGCCAAGGCAAGCGGAACAATGAAGAGCATGCTAGACA
TGTCAAGTAGGTAAATGTGGAATTTGGCGACTGGGTGTTTCGATCGACCTTTTATGCAGGCAGTTATGCGGAAGC
GGCAACCAAGACGTGTCCTTCTGGTCAACGGTGCATATACCGAAGTCTCCACCATTCGATGACATGCGCTGACAT
TTTTATTTGGCAGAGCTATTATAGCTGAAAAGTTAATCGAATATATGAGTTTCAAAGCCCATTACGAGACCGTTG
GACCGAAGGAGGATATCCCACTACACGAGTTTATGGAGCGTCTACCCAGAGAGATCGTTTTAGAACTGTGAGTAT
CCTTCTCGTCTTTCACGGACGTAACGCTGAAAAGTTTTGCCAACAGGTTGGTCGCGGCTGACTACCAAGAAAGTA
AGCTGTTCAGCGTTTTCAGCCTTGTCAAGTTGATTAACCTTTCTCTAGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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