Fungal Genomics

General Properties

Protein ID	Agabi119p4|029610
Gene name
Location	scaffold_12:422962..423976
Strand	+
Gene length (bp)	1014
Transcript length (bp)	540
Coding sequence length (bp)	540
Protein length (aa)	180

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|O77666|TRI26_PIG	Tripartite motif-containing protein 26 OS=Sus scrofa GN=TRIM26 PE=3 SV=2	30	70	1.0E-06
sp|Q99PN3|TRI26_MOUSE	Tripartite motif-containing protein 26 OS=Mus musculus GN=Trim26 PE=2 SV=3	30	70	5.0E-06
sp|P62603|TRI26_RAT	Tripartite motif-containing protein 26 OS=Rattus norvegicus GN=Trim26 PE=3 SV=1	30	70	5.0E-06
sp|Q7YR34|TRI26_PANTR	Tripartite motif-containing protein 26 OS=Pan troglodytes GN=TRIM26 PE=3 SV=1	30	93	9.0E-06
sp|Q12899|TRI26_HUMAN	Tripartite motif-containing protein 26 OS=Homo sapiens GN=TRIM26 PE=1 SV=1	30	93	9.0E-06

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 35	0.551204

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	9406
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H97	AgabiH97|029610
Agaricus bisporus var burnettii H119p4	Agabi119p4|029610 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|029610 MLGPVSFPRSPLSCCASTLILLIPSFPLCPCSIQCGHIFCYECLNRIEPASSDPSPVCPLCRQPYDKHYIIKLHL DTDNPRPSSANQAEQEAKRLQGKMTNLINNGASEPAIRGLLDECQKFIHSQPRNLFSDLRLSHRVMAYLVDVRSD LFSQKQVCSDLNNQVEQLGKEKAELERLI*
Coding	>Agabi119p4|029610 ATGTTAGGACCCGTGTCCTTTCCTCGCTCCCCCCTTTCTTGTTGTGCATCCACACTGATTCTCCTTATACCCTCC TTTCCCCTGTGCCCTTGTTCGATACAATGTGGTCACATTTTCTGTTATGAGTGTCTTAATCGCATAGAGCCCGCA TCCTCAGATCCTTCCCCAGTATGTCCTCTGTGTCGGCAACCCTACGACAAACACTACATTATCAAGCTTCATCTG GATACGGACAATCCTCGACCGTCTAGTGCCAATCAAGCAGAGCAAGAGGCGAAAAGGCTTCAGGGGAAGATGACG AACTTGATTAATAATGGCGCATCCGAACCGGCGATCAGGGGACTACTTGACGAGTGTCAGAAATTCATCCATAGT CAACCGCGCAACTTGTTTTCAGACTTGCGACTGTCACACAGGGTGATGGCATATCTGGTCGATGTGAGATCGGAT CTGTTTTCCCAGAAGCAGGTTTGTAGTGATCTGAACAATCAAGTCGAGCAGCTGGGCAAAGAGAAAGCCGAACTC GAAAGGCTGATATAA
Transcript	>Agabi119p4|029610 ATGTTAGGACCCGTGTCCTTTCCTCGCTCCCCCCTTTCTTGTTGTGCATCCACACTGATTCTCCTTATACCCTCC TTTCCCCTGTGCCCTTGTTCGATACAATGTGGTCACATTTTCTGTTATGAGTGTCTTAATCGCATAGAGCCCGCA TCCTCAGATCCTTCCCCAGTATGTCCTCTGTGTCGGCAACCCTACGACAAACACTACATTATCAAGCTTCATCTG GATACGGACAATCCTCGACCGTCTAGTGCCAATCAAGCAGAGCAAGAGGCGAAAAGGCTTCAGGGGAAGATGACG AACTTGATTAATAATGGCGCATCCGAACCGGCGATCAGGGGACTACTTGACGAGTGTCAGAAATTCATCCATAGT CAACCGCGCAACTTGTTTTCAGACTTGCGACTGTCACACAGGGTGATGGCATATCTGGTCGATGTGAGATCGGAT CTGTTTTCCCAGAAGCAGGTTTGTAGTGATCTGAACAATCAAGTCGAGCAGCTGGGCAAAGAGAAAGCCGAACTC GAAAGGCTGATATAA
Gene	>Agabi119p4|029610 ATGTTAGGACCCGTGTCCTTTCCTCGCTCCCCCCTTTCTTGTTGTGCATCCACACTGATTCTCCTTATACCCTGT GGGCTGTTTCTTTGGACCCTCCCCTTTCAATACCCCTAATCTGTTTACTGTCTTCACCGTCGTTCTTTACCTGGA AATCTATGCCTATTAGCCTTTCCCCTGGTTCAACATGCGACATCTGCACGGAACCATTTGACGGGACTTCTCTAC TAAAGTGCCCTTGTTCGATACAATGTGGTCACATTTTCTGTTATGAGTGGGTGCAATCACGACTAGCTCCACCCT TTCTCATATCCACCCCTCTCGCGGCTCCAGGTGTCTTAATCGCATAGAGCCCGCATCCTCAGATCCTTCCCCAGT ATGTCCTCTGTGTCGGCAACCCTACGACAAACACTACATTATCAAGCTTCATCTGGATACGGACAATCCTCGACC GTCTAGTGCCAATCAAGCAGAGCAAGAGGCGAAAAGGCTTCAGGGGAAGATGACGAACTTGATTAATAATGGCGC ATCCGAACCGGCGATCAGGGGACTACTTGACGAGTGTCAGAAATTCATCCATAGTCAACCGCGCAACTTGGTACG AGGTTTTGTCAGCTATCGAACTTTATTGATCATTCTCTCAGTTTTCAGACTTGCGACTGTCACACAGGGTGATGG CATATCTGGTCGATGTGAGATCGGATCTGTTTTCCCAGAAGCAGGTTTGTAGTGATCTGAACAATCAAGTCGAGC AGCTGGGCAAAGAGAAAGCCGAACTCGAAAGGCGTTTGAAGGACATGAAGGTAAAGCGCAGAGCGTTCAGGAAAT GCGCGGAAGAGAGAGAGTCCGTCCTCAGAGATCACTGCGAACGAGCTCATGCAGCTTATGAGACCATTGTCAAGT GAGTATTACATATTCCCAATCCAACTTCCCTGATTTAATCTGATAACTTTACTTTTAGCCAAGTGAGTATTCGGT CTATGCGTCAGCCAGCCAAAGCCTCATTTTTTAGTATAA