Fungal Genomics

General Properties

Protein ID	Agabi119p4|029400
Gene name
Location	scaffold_12:364163..365887
Strand	-
Gene length (bp)	1724
Transcript length (bp)	1620
Coding sequence length (bp)	1620
Protein length (aa)	540

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	4.6E-09	77	152

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	2573
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|029400
Agaricus bisporus var bisporus H97	AgabiH97|029400
Agaricus bisporus var burnettii H119p4	Agabi119p4|029400 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|029400 MHSTFVDCPRCGHNFVHTSGLYEPQAERATKLVALAPPERISDLQDQVRSLDELISRLNQDKANVLHRINGMRDK TRHIPPEVLSHIFLYVRPPIDFHNHLPPRTDEWQTECQYFRRDTYHREEDHHIKLAGVSHRWRQIVLSTPQLWTT ISVGVWAPSITSHLTLLDLYSRHAGNFPISIELDFRFHAIRWKLEEDQRAREQSITLLKPIFEAVFTRIAPKIHH LTLIAPPSEILSDIDQNFSLCNSLTIYTVMPPDRYQHEPEPPHSLAHAAELPHLQRVFMFRFGFDFTLQWASITV LHLFSMPISAAFDALTKCPNLVEFKNTLAYSRVSLPERIGAEPIEHESLESMSCDDTLDLYRHFRFTSLRTLQWG HIENNLRGPRLDIFSNLPSTLVSLTLGRISLKPGFYPHSLLQCVPQLRELRFLRSEDHVIECAICSIGRPPISGN STTHRSVILPNLRKLSICAYMTVDSGMAVDMLEAMYSMRMGEEDFHLDVFKIEWDVEAAERRENSRQRSLEKHVA VTIMAAGVVREMSH*
Coding	>Agabi119p4|029400 ATGCATTCAACTTTCGTGGATTGTCCTCGCTGTGGCCACAACTTTGTGCATACGAGCGGGCTGTATGAGCCTCAG GCCGAGCGCGCCACCAAGCTCGTTGCATTGGCCCCTCCGGAACGAATTTCTGATCTTCAAGATCAAGTCCGTAGT CTTGATGAGCTGATTTCTCGACTCAATCAAGACAAGGCCAATGTGCTACACAGAATAAACGGAATGCGCGACAAG ACGAGGCATATACCACCCGAAGTCCTATCTCACATCTTCCTGTATGTCCGTCCACCCATCGATTTTCACAATCAC CTCCCTCCCAGGACCGATGAATGGCAAACAGAGTGTCAATATTTCCGAAGGGACACGTATCATCGGGAAGAAGAT CACCATATCAAACTGGCTGGTGTTTCCCACCGCTGGCGGCAGATAGTTCTCTCCACTCCTCAACTTTGGACTACC ATTTCTGTTGGGGTTTGGGCTCCTTCGATTACATCCCATCTTACTCTCCTCGATCTATACAGTCGACACGCGGGG AATTTCCCAATTTCAATAGAACTGGACTTCAGATTCCATGCTATTCGGTGGAAATTGGAAGAAGATCAACGCGCA AGGGAACAAAGCATCACCTTGTTAAAGCCGATCTTCGAGGCAGTCTTCACCAGAATTGCGCCCAAGATACATCAC CTCACCCTTATCGCCCCTCCTTCAGAAATTCTTTCTGATATTGACCAGAACTTCTCCCTGTGTAATTCCCTGACT ATATACACGGTAATGCCGCCAGACAGGTACCAGCATGAACCCGAGCCTCCACACTCGCTCGCTCACGCCGCGGAA CTTCCCCATCTTCAACGCGTGTTCATGTTTCGTTTCGGCTTTGATTTCACCCTTCAATGGGCATCGATCACGGTT CTACACCTTTTTTCAATGCCCATCTCTGCTGCCTTCGACGCTTTGACAAAATGCCCGAACCTTGTCGAATTCAAG AATACGCTGGCCTACTCACGTGTTTCGCTACCGGAACGAATCGGAGCCGAACCAATCGAACATGAGAGCCTGGAG TCGATGTCATGTGATGATACACTGGATTTGTATCGTCACTTTCGGTTCACAAGCCTGCGCACCCTACAATGGGGT CATATAGAAAATAATTTACGTGGACCTCGTCTAGACATCTTTTCCAACCTGCCATCAACCCTAGTATCTCTCACC CTTGGTCGGATATCGCTAAAGCCGGGATTTTATCCACATTCTCTACTTCAATGTGTCCCTCAGCTTCGCGAATTG CGCTTTTTGCGGTCTGAGGACCATGTCATTGAATGTGCTATTTGTAGTATCGGTCGGCCTCCGATCTCAGGAAAC TCTACCACTCACAGATCAGTGATCCTGCCCAACCTTCGCAAGTTGTCTATATGTGCCTATATGACGGTTGATTCG GGAATGGCTGTTGACATGCTGGAAGCAATGTATTCTATGAGGATGGGAGAGGAAGATTTTCATCTGGACGTTTTC AAAATTGAATGGGATGTAGAGGCTGCAGAGAGACGCGAAAATTCCAGACAGCGATCCTTGGAAAAACACGTGGCA GTAACAATCATGGCCGCAGGGGTTGTTAGGGAGATGAGTCATTGA
Transcript	>Agabi119p4|029400 ATGCATTCAACTTTCGTGGATTGTCCTCGCTGTGGCCACAACTTTGTGCATACGAGCGGGCTGTATGAGCCTCAG GCCGAGCGCGCCACCAAGCTCGTTGCATTGGCCCCTCCGGAACGAATTTCTGATCTTCAAGATCAAGTCCGTAGT CTTGATGAGCTGATTTCTCGACTCAATCAAGACAAGGCCAATGTGCTACACAGAATAAACGGAATGCGCGACAAG ACGAGGCATATACCACCCGAAGTCCTATCTCACATCTTCCTGTATGTCCGTCCACCCATCGATTTTCACAATCAC CTCCCTCCCAGGACCGATGAATGGCAAACAGAGTGTCAATATTTCCGAAGGGACACGTATCATCGGGAAGAAGAT CACCATATCAAACTGGCTGGTGTTTCCCACCGCTGGCGGCAGATAGTTCTCTCCACTCCTCAACTTTGGACTACC ATTTCTGTTGGGGTTTGGGCTCCTTCGATTACATCCCATCTTACTCTCCTCGATCTATACAGTCGACACGCGGGG AATTTCCCAATTTCAATAGAACTGGACTTCAGATTCCATGCTATTCGGTGGAAATTGGAAGAAGATCAACGCGCA AGGGAACAAAGCATCACCTTGTTAAAGCCGATCTTCGAGGCAGTCTTCACCAGAATTGCGCCCAAGATACATCAC CTCACCCTTATCGCCCCTCCTTCAGAAATTCTTTCTGATATTGACCAGAACTTCTCCCTGTGTAATTCCCTGACT ATATACACGGTAATGCCGCCAGACAGGTACCAGCATGAACCCGAGCCTCCACACTCGCTCGCTCACGCCGCGGAA CTTCCCCATCTTCAACGCGTGTTCATGTTTCGTTTCGGCTTTGATTTCACCCTTCAATGGGCATCGATCACGGTT CTACACCTTTTTTCAATGCCCATCTCTGCTGCCTTCGACGCTTTGACAAAATGCCCGAACCTTGTCGAATTCAAG AATACGCTGGCCTACTCACGTGTTTCGCTACCGGAACGAATCGGAGCCGAACCAATCGAACATGAGAGCCTGGAG TCGATGTCATGTGATGATACACTGGATTTGTATCGTCACTTTCGGTTCACAAGCCTGCGCACCCTACAATGGGGT CATATAGAAAATAATTTACGTGGACCTCGTCTAGACATCTTTTCCAACCTGCCATCAACCCTAGTATCTCTCACC CTTGGTCGGATATCGCTAAAGCCGGGATTTTATCCACATTCTCTACTTCAATGTGTCCCTCAGCTTCGCGAATTG CGCTTTTTGCGGTCTGAGGACCATGTCATTGAATGTGCTATTTGTAGTATCGGTCGGCCTCCGATCTCAGGAAAC TCTACCACTCACAGATCAGTGATCCTGCCCAACCTTCGCAAGTTGTCTATATGTGCCTATATGACGGTTGATTCG GGAATGGCTGTTGACATGCTGGAAGCAATGTATTCTATGAGGATGGGAGAGGAAGATTTTCATCTGGACGTTTTC AAAATTGAATGGGATGTAGAGGCTGCAGAGAGACGCGAAAATTCCAGACAGCGATCCTTGGAAAAACACGTGGCA GTAACAATCATGGCCGCAGGGGTTGTTAGGGAGATGAGTCATTGA
Gene	>Agabi119p4|029400 ATGCATTCAACTTTCGTGGATTGTCCTCGCTGTGGCCACAACTTTGTGCATACGAGCGGGCTGTATGAGCCTCAG GCCGAGCGCGCCACCAAGCTCGTTGCATTGGCCCCTCCGGAACGAATTTCTGATCTTCAAGATCAAGTCCGTAGT CTTGATGAGCTGATTTCTCGACTCAATCAAGACAAGGCCAATGTGCTACACAGAATAAACGGAATGCGCGACAAG ACGAGGCATATACCACCCGAAGTCCTATCTCACATCTTCCTGTATGTCCGTCCACCCATCGATTTTCACAATCAC CTCCCTCCCAGGACCGATGAATGGCAAACAGAGTGTCAATATTTCCGAAGGGACACGTATCATCGGGAAGAAGAT CACCATATCAAACTGGCTGGTGTTTCCCACCGCTGGCGGCAGATAGTTCTCTCCACTCCTCAACTTTGGACTACC ATTTCTGTTGGGGTTTGGGCTCCTTCGATTACATCCCATCTTACTCTCCTCGATCTATACAGTCGACACGCGGGG AATTTCCCAATTTCAATAGAACTGGACTTCAGATTCCATGCTATTCGGTGGAAATTGGAAGAAGATCAACGCGCA AGGGAACAAAGCATCACCTTGTTAAAGCCGATCTTCGAGGCAGTCTTCACCAGAATTGCGCCCAAGATACATCAC CTCACCCTTATCGCCCCTCCTTCAGAAATTCTTTCTGATATTGACCAGAACTTCTCCCTGTGTAATTCCCTGACT ATATACACGGTAATGCCGCCAGACAGGTACCAGCATGAACCCGAGCCTCCACACTCGCTCGCTCACGCCGCGGAA CTTCCCCATCTTCAACGCGTGTTCATGTTTCGTTTCGGCTTTGATTTCACCCTTCAATGGGCATCGATCACGGTT CTACACCTTTTTTCAATGCCCATCTCTGCTGCCTTCGACGCTTTGACAAAATGCCCGAACCTTGTCGAATTCAAG AATACGCTGGCCTACTCACGTGTTTCGCTACCGGAACGAATCGGAGCCGAACCAATCGAACATGAGAGCCTGGAG TCGATGTCATGTGATGATACACTGGATTTGTATCGTCACTTTCGGTTCACAAGCCTGCGCACCCTACAATGGGGT CATATAGAAAATAATTTACGTGGACCTCGTCTAGACATCTTTTCCAACCTGCCATCAACCCTAGTATCTCTCACC CTTGGTCGGATATCGCTAAAGCCGGGATTTTATCCACATTCTCTACTTCAATGTGTCCCTCAGCTTCGCGAATTG CGCTTTTTGCGGTCTGAGGACCATGTCATTGAATGTGCTATTTGTAGTATCGGTCGGCCTCCGATCTCAGGAAAC TCTACCACTCACAGATCAGTGATCCTGCCCAACCTTCGCAAGTTGTCTATATGTGCCTATATGACGGTTGATTCG GGAATGGCTGTTGACATGCTGGAAGCAATGTATTCTATGAGGATGGGAGAGGAAGATTTTCATCTGGACGTTTTC AAAATTGAATGGGATGTAGAGGCTGCAGAGAGGTTACAGACGCTTGTGTCTTCGGGGTTTAACATCAAAATCACG ACAGACGCGAAAATTCCAGACAGCGATCCTTGGAAAAACACGTGGCAGTAACAATGTACGTACTCGCTCTGCTCT TGTTAGAAGTTGAGACTTAGATTAACCAGTTTCCAAGCATGGCCGCAGGGGTTGTTAGGGAGATGAGTCATTGA