Fungal Genomics

General Properties

Protein ID	Agabi119p4|029270
Gene name
Location	scaffold_12:317206..317700
Strand	-
Gene length (bp)	494
Transcript length (bp)	393
Coding sequence length (bp)	393
Protein length (aa)	131

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	1.9E-05	21	65

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	2564
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|029270
Agaricus bisporus var bisporus H97	AgabiH97|029270
Agaricus bisporus var burnettii H119p4	Agabi119p4|029270 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|029270 MSTFEWSTPTRRSSTGPLNPLPLEVYQEILSHFQENDDMTAPEVRRHLCNMALVCRYFSSIALPRIFAELNIPNG CGDTSINRFCRALANNKEPAASLARYIKTCNFAASMPCEGSLRTQEAFFFISRNR*
Coding	>Agabi119p4|029270 ATGTCAACATTCGAGTGGTCAACTCCTACTCGGAGGTCCAGTACTGGGCCGCTGAACCCACTACCTCTCGAAGTG TACCAGGAGATTCTTAGCCACTTTCAAGAGAATGACGACATGACAGCTCCGGAAGTTCGGCGACATCTTTGCAAT ATGGCCCTCGTCTGCCGGTACTTCTCATCCATCGCACTGCCACGCATATTTGCCGAATTGAATATTCCTAACGGA TGCGGGGACACATCCATAAACCGGTTTTGTCGCGCCCTCGCTAATAACAAAGAACCTGCAGCTAGTCTGGCACGA TACATCAAAACGTGCAATTTTGCTGCTTCCATGCCATGCGAAGGTTCGCTTCGAACTCAGGAAGCTTTCTTTTTC ATATCGCGTAACCGTTGA
Transcript	>Agabi119p4|029270 ATGTCAACATTCGAGTGGTCAACTCCTACTCGGAGGTCCAGTACTGGGCCGCTGAACCCACTACCTCTCGAAGTG TACCAGGAGATTCTTAGCCACTTTCAAGAGAATGACGACATGACAGCTCCGGAAGTTCGGCGACATCTTTGCAAT ATGGCCCTCGTCTGCCGGTACTTCTCATCCATCGCACTGCCACGCATATTTGCCGAATTGAATATTCCTAACGGA TGCGGGGACACATCCATAAACCGGTTTTGTCGCGCCCTCGCTAATAACAAAGAACCTGCAGCTAGTCTGGCACGA TACATCAAAACGTGCAATTTTGCTGCTTCCATGCCATGCGAAGGTTCGCTTCGAACTCAGGAAGCTTTCTTTTTC ATATCGCGTAACCGTTGA
Gene	>Agabi119p4|029270 ATGTCAACATTCGAGTGGTCAAGTAAGTGATCATTTATATATATAGATCTAGACAGAACTCAACTTCTTGTAGCT CCTACTCGGAGGTCCAGTACTGGGCCGCTGAACCCACTACCTCTCGAAGTGTACCAGGAGATTCTTAGCCACTTT CAAGAGAATGACGACATGACAGCTCCGGAAGTTCGGCGACATCTTTGCAATATGGCCCTCGTCTGCCGGTACTTC TCATCCATCGCACTGCCACGCATATTTGCCGAATTGAATATTCCTAACGGATGCGGGGACACATCCATAAACCGG TTTTGTCGCGCCCTCGCTAATAACAAAGAACCTGCAGCTAGTCTGGCACGATACATCAAAACGTGCAATTTTGCT GCTTCCATGCCATGCGAAGGTTCGCTTCGAACTCAGGAAGCTTTCTTTTTCATGTACTGTGTCGCTCTCTCAAAA ATGACCTCTGTTGAGGCCATTAACCTAGATCGCGTAACCGTTGA