Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|028550
Gene name
Locationscaffold_12:112236..114762
Strand-
Gene length (bp)2526
Transcript length (bp)2211
Coding sequence length (bp)2211
Protein length (aa) 737

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03935 SKN1_KRE6_Sbg1 Beta-glucan synthesis-associated protein SKN1/KRE6/Sbg1 4.0E-182 196 734

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O13941|YEPB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.11c PE=3 SV=1 196 731 3.0E-121
sp|P32486|KRE6_YEAST Beta-glucan synthesis-associated protein KRE6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRE6 PE=1 SV=2 139 736 8.0E-120
sp|P87024|SKN1_CANAX Beta-glucan synthesis-associated protein SKN1 OS=Candida albicans GN=SKN1 PE=2 SV=1 194 731 5.0E-112
sp|P33336|SKN1_YEAST Beta-glucan synthesis-associated protein SKN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKN1 PE=1 SV=1 194 736 4.0E-111
sp|P87023|KRE6_CANAX Beta-glucan synthesis-associated protein KRE6 OS=Candida albicans GN=KRE6 PE=2 SV=1 184 731 4.0E-109
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O13941|YEPB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.11c PE=3 SV=1 196 731 3.0E-121
sp|P32486|KRE6_YEAST Beta-glucan synthesis-associated protein KRE6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRE6 PE=1 SV=2 139 736 8.0E-120
sp|P87024|SKN1_CANAX Beta-glucan synthesis-associated protein SKN1 OS=Candida albicans GN=SKN1 PE=2 SV=1 194 731 5.0E-112
sp|P33336|SKN1_YEAST Beta-glucan synthesis-associated protein SKN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKN1 PE=1 SV=1 194 736 4.0E-111
sp|P87023|KRE6_CANAX Beta-glucan synthesis-associated protein KRE6 OS=Candida albicans GN=KRE6 PE=2 SV=1 184 731 4.0E-109
sp|O13789|YEOB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C17G6.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G6.11c PE=3 SV=1 200 734 5.0E-93
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 69 0.45

Transmembrane Domains

Domain # Start End Length
1 223 245 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|028550
MADDSKNPFQSPGERGEHVEHEELLAMSEYASPQLTTSQLQNRAAVRSSSTASFISSPLNPASPPFARSLSSRPP
SRSSTTLSKFMPSYDDSALLSPHFTGTSLPAGVGQRGSMVLYRLADERDRPTSNLVTTNGSDHDSLLVPPKFPSN
RESVLSTSGDSIFSFHSDSKYPSGMPGTQRGLVAYPYDPVLDELDAPDEEDFLHDPTSKGGMRGQRGAFPWRGIL
NVSILLLLILALLSLFVFYPVLQFFRDRPRNEQIVGNIRVNNTGQAPALFQMPELIDAATPQDVRSRVGSDGKDY
ELVFSDEFEQEGRSFYEGDDPFWEAVELWYGQTGDLEWYDPQQITTREGALVITLDSTQTLQSNLTVGSTAPFTP
AENHDLNYRSGMLQSWNKFCFTRGYIEVAVVLPGSDENSKGYWPGAWTMGNLARPGYRATTDGMWPYTYDSCDVG
TFPNQTNPDGLGPAAALHSEESRAGYNYELSWLAGQRLSACSCPDSDHPGPVYNRGRGAPEIDIFEVEINKTSGL
TQVSSQSAQFAPFTHDYFYDPSALTISDPTLTVPNNYHGSALQQAISSLTRLPSDGYQGNVQPGQPKPYKVYGFE
YWSDPKDQGSGYVQWTVDSKESYRMDASAVGPDPEDVGGSGVGQRLIPVEPMSIILNLGISPNWQTIDETTLLFP
AEMLIDYVRVYQRKDEVNVGCDPKDYPTADYIASHIDAYRDRNMTEWPYAKPRNSLYDGSC*
Coding >Agabi119p4|028550
ATGGCCGACGACAGCAAGAACCCATTCCAGTCGCCTGGCGAGCGAGGAGAGCACGTCGAGCACGAAGAACTGCTG
GCCATGTCCGAGTACGCCTCCCCCCAACTCACCACCAGCCAGCTCCAGAACCGGGCCGCCGTCCGCTCGTCTTCC
ACCGCCTCTTTTATTTCCTCGCCCCTCAACCCAGCCTCACCGCCCTTTGCTCGCTCGCTCTCGTCTCGCCCACCC
TCCCGCTCGTCCACCACGCTCTCCAAGTTCATGCCCTCCTACGACGACTCGGCGCTGCTCTCTCCCCATTTCACA
GGCACCTCCCTCCCCGCAGGCGTCGGCCAGCGCGGTTCCATGGTCCTCTATCGCCTCGCAGACGAGCGAGACCGC
CCCACCTCCAACCTCGTTACCACCAACGGAAGCGACCACGACTCCCTCCTCGTCCCTCCCAAATTTCCCTCCAAC
CGAGAATCCGTCCTTTCCACCTCGGGTGACTCCATCTTTTCCTTCCACTCGGATTCAAAATACCCCTCTGGCATG
CCAGGCACTCAGCGAGGCCTGGTCGCATACCCCTATGATCCCGTACTCGATGAGCTCGATGCTCCTGATGAAGAA
GACTTTCTTCACGATCCTACAAGTAAAGGCGGCATGAGAGGCCAACGAGGCGCCTTTCCTTGGCGAGGCATCTTG
AACGTCTCTATACTCCTCCTCCTTATTCTTGCCCTCCTCTCCCTCTTTGTCTTTTACCCCGTCTTGCAATTTTTT
CGTGACCGACCCAGAAATGAACAGATCGTTGGAAATATACGTGTCAATAATACAGGGCAAGCGCCCGCACTATTC
CAAATGCCGGAACTTATAGACGCTGCTACGCCGCAGGACGTCCGCTCCCGTGTGGGTTCTGATGGCAAGGACTAC
GAGCTCGTCTTTTCAGACGAGTTCGAGCAGGAAGGCAGATCCTTTTATGAAGGCGATGATCCCTTTTGGGAAGCA
GTCGAACTCTGGTATGGTCAGACCGGAGATCTCGAATGGTATGATCCTCAACAAATCACGACCCGTGAGGGCGCC
CTTGTCATTACCCTTGATTCCACGCAAACCCTTCAATCCAATCTTACCGTTGGCTCGACGGCGCCATTCACTCCT
GCTGAAAACCACGACTTGAACTATCGCAGTGGAATGCTTCAATCCTGGAATAAATTCTGTTTTACCCGAGGTTAC
ATCGAAGTCGCTGTCGTTCTCCCAGGGTCTGACGAAAACTCGAAAGGATACTGGCCTGGCGCTTGGACGATGGGA
AATTTGGCAAGACCGGGTTATAGAGCGACGACGGATGGGATGTGGCCGTATACGTATGATTCGTGTGATGTGGGA
ACTTTTCCTAATCAGACGAATCCGGATGGATTGGGTCCGGCGGCGGCCCTGCATTCTGAAGAATCGAGAGCGGGC
TATAATTACGAGTTGAGTTGGTTGGCAGGGCAAAGACTGTCAGCGTGTTCGTGTCCTGATTCAGACCATCCTGGG
CCGGTTTATAATAGAGGCCGCGGAGCGCCTGAAATTGATATATTTGAAGTGGAAATCAACAAGACGAGTGGATTG
ACACAAGTCTCTTCTCAATCTGCCCAATTTGCACCTTTTACGCATGATTACTTTTACGACCCTAGTGCCTTGACC
ATTTCCGATCCTACCCTCACCGTCCCGAACAATTATCACGGTTCAGCATTACAACAAGCTATATCTTCATTAACC
CGATTACCGAGTGATGGGTATCAAGGGAATGTGCAACCGGGGCAACCGAAACCGTACAAGGTGTATGGATTTGAG
TATTGGTCGGATCCGAAGGATCAGGGGTCGGGGTATGTGCAGTGGACGGTGGATTCGAAGGAGTCGTATAGGATG
GATGCGAGTGCTGTTGGACCGGATCCGGAAGATGTGGGTGGATCGGGGGTAGGGCAGAGGTTGATACCGGTGGAA
CCGATGTCGATTATATTGAATTTGGGGATTTCACCGAATTGGCAGACGATTGATGAGACGACGTTGTTGTTCCCT
GCGGAGATGTTGATTGATTATGTGAGGGTGTATCAGAGGAAGGATGAGGTGAATGTGGGATGTGATCCGAAGGAT
TATCCGACGGCGGATTATATTGCGAGTCATATTGATGCTTATCGAGATCGGAATATGACGGAGTGGCCTTATGCG
AAGCCGAGGAATTCACTTTATGATGGATCATGTTGA
Transcript >Agabi119p4|028550
ATGGCCGACGACAGCAAGAACCCATTCCAGTCGCCTGGCGAGCGAGGAGAGCACGTCGAGCACGAAGAACTGCTG
GCCATGTCCGAGTACGCCTCCCCCCAACTCACCACCAGCCAGCTCCAGAACCGGGCCGCCGTCCGCTCGTCTTCC
ACCGCCTCTTTTATTTCCTCGCCCCTCAACCCAGCCTCACCGCCCTTTGCTCGCTCGCTCTCGTCTCGCCCACCC
TCCCGCTCGTCCACCACGCTCTCCAAGTTCATGCCCTCCTACGACGACTCGGCGCTGCTCTCTCCCCATTTCACA
GGCACCTCCCTCCCCGCAGGCGTCGGCCAGCGCGGTTCCATGGTCCTCTATCGCCTCGCAGACGAGCGAGACCGC
CCCACCTCCAACCTCGTTACCACCAACGGAAGCGACCACGACTCCCTCCTCGTCCCTCCCAAATTTCCCTCCAAC
CGAGAATCCGTCCTTTCCACCTCGGGTGACTCCATCTTTTCCTTCCACTCGGATTCAAAATACCCCTCTGGCATG
CCAGGCACTCAGCGAGGCCTGGTCGCATACCCCTATGATCCCGTACTCGATGAGCTCGATGCTCCTGATGAAGAA
GACTTTCTTCACGATCCTACAAGTAAAGGCGGCATGAGAGGCCAACGAGGCGCCTTTCCTTGGCGAGGCATCTTG
AACGTCTCTATACTCCTCCTCCTTATTCTTGCCCTCCTCTCCCTCTTTGTCTTTTACCCCGTCTTGCAATTTTTT
CGTGACCGACCCAGAAATGAACAGATCGTTGGAAATATACGTGTCAATAATACAGGGCAAGCGCCCGCACTATTC
CAAATGCCGGAACTTATAGACGCTGCTACGCCGCAGGACGTCCGCTCCCGTGTGGGTTCTGATGGCAAGGACTAC
GAGCTCGTCTTTTCAGACGAGTTCGAGCAGGAAGGCAGATCCTTTTATGAAGGCGATGATCCCTTTTGGGAAGCA
GTCGAACTCTGGTATGGTCAGACCGGAGATCTCGAATGGTATGATCCTCAACAAATCACGACCCGTGAGGGCGCC
CTTGTCATTACCCTTGATTCCACGCAAACCCTTCAATCCAATCTTACCGTTGGCTCGACGGCGCCATTCACTCCT
GCTGAAAACCACGACTTGAACTATCGCAGTGGAATGCTTCAATCCTGGAATAAATTCTGTTTTACCCGAGGTTAC
ATCGAAGTCGCTGTCGTTCTCCCAGGGTCTGACGAAAACTCGAAAGGATACTGGCCTGGCGCTTGGACGATGGGA
AATTTGGCAAGACCGGGTTATAGAGCGACGACGGATGGGATGTGGCCGTATACGTATGATTCGTGTGATGTGGGA
ACTTTTCCTAATCAGACGAATCCGGATGGATTGGGTCCGGCGGCGGCCCTGCATTCTGAAGAATCGAGAGCGGGC
TATAATTACGAGTTGAGTTGGTTGGCAGGGCAAAGACTGTCAGCGTGTTCGTGTCCTGATTCAGACCATCCTGGG
CCGGTTTATAATAGAGGCCGCGGAGCGCCTGAAATTGATATATTTGAAGTGGAAATCAACAAGACGAGTGGATTG
ACACAAGTCTCTTCTCAATCTGCCCAATTTGCACCTTTTACGCATGATTACTTTTACGACCCTAGTGCCTTGACC
ATTTCCGATCCTACCCTCACCGTCCCGAACAATTATCACGGTTCAGCATTACAACAAGCTATATCTTCATTAACC
CGATTACCGAGTGATGGGTATCAAGGGAATGTGCAACCGGGGCAACCGAAACCGTACAAGGTGTATGGATTTGAG
TATTGGTCGGATCCGAAGGATCAGGGGTCGGGGTATGTGCAGTGGACGGTGGATTCGAAGGAGTCGTATAGGATG
GATGCGAGTGCTGTTGGACCGGATCCGGAAGATGTGGGTGGATCGGGGGTAGGGCAGAGGTTGATACCGGTGGAA
CCGATGTCGATTATATTGAATTTGGGGATTTCACCGAATTGGCAGACGATTGATGAGACGACGTTGTTGTTCCCT
GCGGAGATGTTGATTGATTATGTGAGGGTGTATCAGAGGAAGGATGAGGTGAATGTGGGATGTGATCCGAAGGAT
TATCCGACGGCGGATTATATTGCGAGTCATATTGATGCTTATCGAGATCGGAATATGACGGAGTGGCCTTATGCG
AAGCCGAGGAATTCACTTTATGATGGATCATGTTGA
Gene >Agabi119p4|028550
ATGGCCGACGACAGCAAGAACCCATTCCAGTCGCCTGGCGAGCGAGGAGAGCACGTCGAGCACGAAGAACTGCTG
GCCATGTCCGAGTACGCCTCCCCCCAACTCACCACCAGCCAGCTCCAGAACCGGGCCGCCGTCCGCTCGTCTTCC
ACCGCCTCTTTTATTTCCTCGCCCCTCAACCCAGCCTCACCGCCCTTTGCTCGCTCGCTCTCGTCTCGCCCACCC
TCCCGCTCGTCCACCACGCTCTCCAAGTTCATGCCCTCCTACGACGACTCGGCGCTGCTCTCTCCCCATTTCACA
GGCACCTCCCTCCCCGCAGGCGTCGGCCAGCGCGGTTCCATGGTCCTCTATCGCCTCGCAGACGAGCGAGACCGC
CCCACCTCCAACCTCGTTACCACCAACGGAAGCGACCACGACTCCCTCCTCGTCCCTCCCAAATTTCCCTCCAAC
CGAGAATCCGTCCTTTCCACCTCGGGTGACTCCATCTTTTCCTTCCACTCGGATTCAAAATACCCCTCTGGCATG
CCAGGCACTCAGCGAGGCCTGGTCGCATACCCCTATGATCCCGTACTCGATGAGCTCGATGCTCCTGATGAAGAA
GACTTTCTTCACGATCCTACAAGTAAAGGCGGCATGAGAGGCCAACGAGGCGCCTTTCCTTGGCGAGGCATCTTG
AACGTCTCTATACTCCTCCTCCTTATTCTTGCCCTCCTCTCCCTCTTTGTCTTTTACCCCGTCTTGCAATTTTTT
CGTGACCGACCCAGAAATGAACAGATCGTTGGAAATATACGTGTCAATAATACAGGTAAAATTGCCGTCAACTCT
TCTTGGTCACACCGTTTAATTTTTTCATAGGGCAAGCGCCCGCACTATTCCAAATGCCGGAACTTATAGACGCTG
CTACGCCGCAGGACGTCCGCTCCCGTGTGGGTTCTGATGGCAAGGACTACGAGCTCGTCTTTTCAGACGAGTTCG
AGCAGGAAGGCAGATCCTTTTATGAAGGCGATGATCCCTTTTGGGAAGCAGTCGAACTCTGGTATGGTCAGACCG
GAGATCTCGAATGGTATGATCCTCAACAAATCACGACCCGTGAGGGCGCCCTTGTCATTACCCTTGATTCCACGC
AAACCCTTCAATCCAATCTTACCGTTGGTGCGTCTCCGTTTTCTCTTTGTCTTTTATTTTTTTGACAGTAATGCA
GGCTCGACGGCGCCATTCACTCCTGCTGAAAACCACGACTTGAACTATCGCAGTGGAATGCTTCAATCCTGGAAT
AAATTCTGTTTTACCCGAGGTTACATCGAAGTCGCTGTCGTTCTCCCAGGGTCTGACGAAAACTCGAAAGGATAC
GTGAGTCACCCGTTGTGCTCACTTTTTGACAACTGATCTGATGAGGTTAGTGGCCTGGCGCTTGGACGATGGGAA
ATTTGGCAAGACCGGGTTATAGAGCGACGACGGATGGGATGTGGCCGTATACGTATGATTCGTGTGATGTGGGAA
CTTTTCCTAATCAGACGAATCCGGATGGATTGGGTCCGGCGGCGGCCCTGCATTCTGAAGAATCGAGAGCGGGCT
ATAATTACGAGTTGAGTTGGTTGGCAGGGCAAAGACTGTCGTACGTTCTTTGTGTTTGTCATCTGCCTCTACTAT
TTTGACACTCCTTTCAGAGCGTGTTCGTGTCCTGATTCAGACCATCCTGGGCCGGTTTATAATAGAGGCCGCGGA
GCGCCTGAAATTGATATATTTGAAGTGGAAATCAACAAGACGAGTGGATTGACACAAGTCTCTTCTCAATCTGCC
CAATTTGCACCTTTTACGCATGATTACTTTTACGACCCTAGTGCCTTGACCATTTCCGATCCTACCCTCACCGTC
CCGAACAATTATCACGGTTCAGCATTACAACAAGCTATATCTTCATTAACCCGATTACCGAGTGATGGGTATCAA
GGGAATGTGCAACCGGGGCAACCGAAACCGTACAAGGTGTATGGATTTGAGTATTGGTCGGATCCGAAGGATCAG
GGGTCGGGGTATGTGCAGTGGACGGTGGATTCGAAGGAGTCGTATAGGATGGATGCGAGTGCTGTTGGACCGGAT
CCGGAAGATGTGGGTGGATCGGGGGTAGGGCAGAGGTTGATACCGGTGGAACCGATGTCGATTATATTGAATTTG
GGGATTTCACGTGCGTTTATGATTTTCTCTCTCTCTCTCAATACTGATTGATGGTGGATGAGTTAGCGAATTGGC
AGACGATTGATGAGACGACGTTGTTGTTCCCTGCGGAGATGTTGATTGATTATGTGAGGGTGTATCAGAGGAAGG
ATGAGGTGAATGTGGGATGTGATCCGAAGGATTATCCGACGGCGGATTATATTGCGAGTCATATTGATGCTTATC
GAGGTGAGTTTTTCTGTTAGGCTCGAGGAGAAAAAAAAAACTAAGGTGTTGGACTTTGTAGATCGGAATATGACG
GAGTGGCCTTATGCGAAGCCGAGGAATTCACTTTATGATGGATCATGTTGA

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