Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|028370
Gene name
Locationscaffold_12:59189..60165
Strand-
Gene length (bp)976
Transcript length (bp)918
Coding sequence length (bp)918
Protein length (aa) 306

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 3.1E-12 21 228
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 3.5E-10 28 150
PF08659 KR KR domain 3.2E-07 24 115

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q8N5I4|DHRSX_HUMAN Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2 13 303 4.0E-11
sp|Q8VBZ0|DHRSX_MOUSE Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=1 SV=2 7 301 1.0E-09
sp|P34251|YKK7_YEAST Uncharacterized oxidoreductase YKL107W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL107W PE=1 SV=1 24 223 2.0E-09
sp|Q9ERI6|RDH14_MOUSE Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1 18 295 6.0E-09
sp|O74959|YJCD_SCHPO Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1 21 264 7.0E-09
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q8N5I4|DHRSX_HUMAN Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2 13 303 4.0E-11
sp|Q8VBZ0|DHRSX_MOUSE Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=1 SV=2 7 301 1.0E-09
sp|P34251|YKK7_YEAST Uncharacterized oxidoreductase YKL107W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL107W PE=1 SV=1 24 223 2.0E-09
sp|Q9ERI6|RDH14_MOUSE Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1 18 295 6.0E-09
sp|O74959|YJCD_SCHPO Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1 21 264 7.0E-09
sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1 18 295 7.0E-08
sp|Q99J47|DRS7B_MOUSE Dehydrogenase/reductase SDR family member 7B OS=Mus musculus GN=Dhrs7b PE=1 SV=1 21 223 6.0E-07
sp|Q0IH28|DRS7B_XENLA Dehydrogenase/reductase SDR family member 7B OS=Xenopus laevis GN=dhrs7b PE=2 SV=1 19 223 8.0E-06
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GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup2514
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|028370
Agaricus bisporus var bisporus H97 AgabiH97|028370
Agaricus bisporus var burnettii H119p4 Agabi119p4|028370 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|028370
MSSLSSIRNANATFKPKYAPVAVFVGGTSGIGRAMAEVLGRHTEGKVDIVIVGRNKEAADELFSKMPSPTDKTYK
REFIRCDVTRMKNVEAATKEILARHSKINFLILSPGVFTTRGRNETEEGLDTKLAVHYYSRWKFIKDLLPVLNKA
SEEGEDAKVFSVLAPGKGSEIDLNDLGLKKTFSVTKAALQAPTYNDLMMEAFHDLNPAVTFIHGYPGVVRTSLFE
KSDSTLVKFASPLVNLLLWPVFTSPEDCGEYMWHAVFNSTDGVFRTGSKGEDLGKQRYFGSEEAKKKLWDHTVEA
TAVDS*
Coding >Agabi119p4|028370
ATGTCTTCACTATCCTCCATCCGTAACGCAAATGCTACTTTTAAGCCTAAATATGCGCCGGTCGCGGTATTCGTG
GGAGGAACATCTGGGATAGGACGTGCAATGGCTGAAGTACTTGGGCGACATACCGAAGGAAAAGTTGACATAGTC
ATTGTCGGACGGAATAAGGAAGCCGCAGACGAACTTTTCTCCAAAATGCCTTCCCCAACAGACAAAACATATAAG
CGCGAATTCATTCGTTGCGATGTCACACGGATGAAAAACGTAGAAGCCGCTACTAAGGAGATTCTCGCTCGACAT
TCAAAGATCAATTTTCTCATATTGTCGCCGGGGGTGTTCACGACGAGGGGCCGGAATGAGACGGAGGAGGGTTTG
GATACCAAACTCGCAGTGCATTATTATTCTCGATGGAAGTTCATCAAGGATCTACTCCCCGTTTTGAATAAAGCC
AGCGAGGAAGGAGAGGATGCCAAAGTTTTCTCCGTGCTTGCTCCGGGAAAGGGTAGTGAAATTGATTTGAATGAT
CTTGGCCTCAAGAAAACTTTTTCTGTCACGAAGGCTGCGCTCCAAGCCCCGACGTATAATGATTTGATGATGGAG
GCTTTTCATGATTTGAATCCCGCAGTCACTTTCATTCATGGGTATCCAGGGGTTGTTCGTACTTCATTGTTTGAA
AAATCGGACTCTACCCTCGTGAAATTCGCCAGCCCCCTGGTCAATCTCTTACTCTGGCCTGTGTTCACGTCACCG
GAAGATTGTGGAGAATATATGTGGCATGCAGTATTCAATAGTACGGATGGCGTTTTTAGAACGGGATCGAAGGGT
GAGGATCTAGGGAAGCAGCGATACTTTGGCAGTGAAGAGGCAAAGAAGAAGCTGTGGGACCATACAGTAGAAGCG
ACAGCAGTTGACTCCTGA
Transcript >Agabi119p4|028370
ATGTCTTCACTATCCTCCATCCGTAACGCAAATGCTACTTTTAAGCCTAAATATGCGCCGGTCGCGGTATTCGTG
GGAGGAACATCTGGGATAGGACGTGCAATGGCTGAAGTACTTGGGCGACATACCGAAGGAAAAGTTGACATAGTC
ATTGTCGGACGGAATAAGGAAGCCGCAGACGAACTTTTCTCCAAAATGCCTTCCCCAACAGACAAAACATATAAG
CGCGAATTCATTCGTTGCGATGTCACACGGATGAAAAACGTAGAAGCCGCTACTAAGGAGATTCTCGCTCGACAT
TCAAAGATCAATTTTCTCATATTGTCGCCGGGGGTGTTCACGACGAGGGGCCGGAATGAGACGGAGGAGGGTTTG
GATACCAAACTCGCAGTGCATTATTATTCTCGATGGAAGTTCATCAAGGATCTACTCCCCGTTTTGAATAAAGCC
AGCGAGGAAGGAGAGGATGCCAAAGTTTTCTCCGTGCTTGCTCCGGGAAAGGGTAGTGAAATTGATTTGAATGAT
CTTGGCCTCAAGAAAACTTTTTCTGTCACGAAGGCTGCGCTCCAAGCCCCGACGTATAATGATTTGATGATGGAG
GCTTTTCATGATTTGAATCCCGCAGTCACTTTCATTCATGGGTATCCAGGGGTTGTTCGTACTTCATTGTTTGAA
AAATCGGACTCTACCCTCGTGAAATTCGCCAGCCCCCTGGTCAATCTCTTACTCTGGCCTGTGTTCACGTCACCG
GAAGATTGTGGAGAATATATGTGGCATGCAGTATTCAATAGTACGGATGGCGTTTTTAGAACGGGATCGAAGGGT
GAGGATCTAGGGAAGCAGCGATACTTTGGCAGTGAAGAGGCAAAGAAGAAGCTGTGGGACCATACAGTAGAAGCG
ACAGCAGTTGACTCCTGA
Gene >Agabi119p4|028370
ATGTCTTCACTATCCTCCATCCGTAACGCAAATGCTACTTTTAAGCCTAAATATGCGCCGGTCGCGGTATTCGTG
GGAGGAACATCTGGGATAGGACGTGCAATGGCTGAAGTACTTGGGCGACATACCGAAGGAAAAGTTGACATAGTC
ATTGTCGGACGGAATAAGGAAGCCGCAGACGAACTTTTCTCCAAAATGCCTTCCCCAACAGACAAAACATATAAG
CGCGAATTCATTCGTTGCGATGTCACACGGATGAAAAACGTAGAAGCCGCTACTAAGGAGATTCTCGCTCGACAT
TCAAAGATCAATTTTCTCATATTGTCGCCGGGGGTGTTCACGACGAGGGGCCGGAATGAGACGGAGGAGGGTTTG
GATACCAAACTCGCAGTGCATTATTATTCTCGATGGAAGTTCATCAAGGATCTACTCCCCGTTTTGAATAAAGCC
AGCGAGGAAGGAGAGGATGCCAAAGTTTTCTCCGTGCTTGCTCCGGGAAAGGGTAGTGAAATTGATTTGAATGAT
CTTGGCCTCAAGAAAACTTTTTCTGTCACGAAGGCTGCGCTCCAAGCCCCGACGTATAATGATTTGATGATGGAG
GTGCGTCTCTCAAGCGCTTGCTGTTATCATTTGATTTCAATCATGTGAAATTTTCAAGGCTTTTCATGATTTGAA
TCCCGCAGTCACTTTCATTCATGGGTATCCAGGGGTTGTTCGTACTTCATTGTTTGAAAAATCGGACTCTACCCT
CGTGAAATTCGCCAGCCCCCTGGTCAATCTCTTACTCTGGCCTGTGTTCACGTCACCGGAAGATTGTGGAGAATA
TATGTGGCATGCAGTATTCAATAGTACGGATGGCGTTTTTAGAACGGGATCGAAGGGTGAGGATCTAGGGAAGCA
GCGATACTTTGGCAGTGAAGAGGCAAAGAAGAAGCTGTGGGACCATACAGTAGAAGCGACAGCAGTTGACTCCTG
A

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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