© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|028360 |
| Gene name | |
| Location | scaffold_12:57935..58991 |
| Strand | - |
| Gene length (bp) | 1056 |
| Transcript length (bp) | 996 |
| Coding sequence length (bp) | 996 |
| Protein length (aa) | 332 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00106 | adh_short | short chain dehydrogenase | 3.7E-15 | 46 | 191 |
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 1.6E-10 | 54 | 185 |
| PF08659 | KR | KR domain | 1.9E-09 | 48 | 141 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q53877|DNRU_STRS5 | Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces sp. (strain C5) PE=3 SV=1 | 34 | 249 | 5.0E-12 |
| sp|Q8N5I4|DHRSX_HUMAN | Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2 | 35 | 328 | 4.0E-11 |
| sp|Q9ZAU1|DNRU_STRPE | Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces peucetius GN=dnrU PE=3 SV=1 | 36 | 249 | 3.0E-10 |
| sp|A0PJE2|DHR12_HUMAN | Dehydrogenase/reductase SDR family member 12 OS=Homo sapiens GN=DHRS12 PE=2 SV=2 | 31 | 247 | 6.0E-10 |
| sp|P34251|YKK7_YEAST | Uncharacterized oxidoreductase YKL107W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL107W PE=1 SV=1 | 50 | 267 | 3.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q53877|DNRU_STRS5 | Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces sp. (strain C5) PE=3 SV=1 | 34 | 249 | 5.0E-12 |
| sp|Q8N5I4|DHRSX_HUMAN | Dehydrogenase/reductase SDR family member on chromosome X OS=Homo sapiens GN=DHRSX PE=2 SV=2 | 35 | 328 | 4.0E-11 |
| sp|Q9ZAU1|DNRU_STRPE | Putative daunorubicin C-13 ketoreductase DnrU OS=Streptomyces peucetius GN=dnrU PE=3 SV=1 | 36 | 249 | 3.0E-10 |
| sp|A0PJE2|DHR12_HUMAN | Dehydrogenase/reductase SDR family member 12 OS=Homo sapiens GN=DHRS12 PE=2 SV=2 | 31 | 247 | 6.0E-10 |
| sp|P34251|YKK7_YEAST | Uncharacterized oxidoreductase YKL107W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL107W PE=1 SV=1 | 50 | 267 | 3.0E-09 |
| sp|O74959|YJCD_SCHPO | Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1 | 47 | 325 | 5.0E-08 |
| sp|Q9ERI6|RDH14_MOUSE | Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1 | 33 | 249 | 7.0E-08 |
| sp|Q9HBH5|RDH14_HUMAN | Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1 | 33 | 249 | 8.0E-08 |
| sp|A6QP05|DHR12_BOVIN | Dehydrogenase/reductase SDR family member 12 OS=Bos taurus GN=DHRS12 PE=2 SV=1 | 48 | 247 | 1.0E-07 |
| sp|Q8VBZ0|DHRSX_MOUSE | Dehydrogenase/reductase SDR family member on chromosome X homolog OS=Mus musculus GN=Dhrsx PE=1 SV=2 | 6 | 202 | 4.0E-07 |
| sp|Q3T0R4|DRS7B_BOVIN | Dehydrogenase/reductase SDR family member 7B OS=Bos taurus GN=DHRS7B PE=2 SV=1 | 48 | 249 | 5.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 23 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|028360 MQVVKKSLRFVVPPLAVGMVIAATCDFIMDCNDPEPVHYSPQLAPTAIFVGGTAGIGRAMVENFGNRTLGDANIV IIGRNRAAAEEIIAQLPKTKDPNVKHEFVQCDVSRMKNVREATQQVLSRHPKINFLVLTAGLMSTKGRNETEEGL DAKLAVHYYSRWAFIKGFMPALEKAIEGKEDGKVISVLAAGEGQGRIDMTDLGLARTFSLSRAASHAATYNDLMV DEFASRHPGLTFIHAYPGFVRTNLLSSSDSSALQIAGPVLNYLLSPLMLRPNRCATRMWAGVFNHTGGAHQLSSL GRGLETPFHGTLDQRQKLWAHTAQITGVTSK* |
| Coding | >Agabi119p4|028360 ATGCAAGTAGTTAAAAAGTCTCTCCGATTCGTTGTCCCTCCATTAGCAGTTGGTATGGTCATTGCGGCTACCTGT GATTTCATCATGGATTGCAACGATCCCGAGCCGGTGCATTATTCCCCACAACTTGCTCCTACGGCTATCTTTGTC GGCGGTACTGCAGGTATCGGCCGTGCTATGGTCGAAAACTTTGGCAATCGTACACTGGGAGACGCCAACATCGTC ATCATCGGACGAAACCGCGCCGCAGCAGAAGAGATCATCGCCCAGCTACCAAAAACAAAAGACCCAAATGTCAAA CACGAATTCGTTCAATGTGATGTGTCTCGTATGAAAAACGTCCGTGAAGCGACACAACAAGTCCTCTCGCGCCAT CCTAAAATCAATTTCCTGGTTTTGACTGCTGGTTTGATGTCGACGAAGGGAAGAAATGAGACGGAGGAAGGTCTG GATGCCAAACTTGCTGTTCATTATTATTCAAGATGGGCGTTTATCAAAGGCTTTATGCCCGCTCTGGAGAAAGCC ATTGAGGGGAAGGAGGATGGGAAAGTGATTTCTGTGCTCGCTGCTGGGGAGGGCCAGGGAAGAATCGATATGACT GATCTGGGACTTGCAAGGACATTCTCGCTCAGCCGCGCTGCGTCGCATGCTGCAACATACAATGACTTGATGGTT GATGAGTTCGCATCTCGTCACCCAGGACTCACTTTTATCCATGCGTACCCCGGCTTCGTTCGCACTAACTTGTTA TCATCGTCAGATTCAAGCGCACTCCAAATCGCTGGCCCCGTTTTGAACTATCTTTTGTCGCCGTTGATGTTACGT CCAAATCGTTGTGCGACAAGAATGTGGGCTGGTGTATTCAACCATACCGGAGGCGCTCATCAGTTGTCGTCGTTG GGGAGGGGGTTGGAGACACCGTTTCATGGCACACTTGACCAAAGACAAAAGCTTTGGGCGCATACTGCCCAGATC ACAGGGGTGACGAGTAAATGA |
| Transcript | >Agabi119p4|028360 ATGCAAGTAGTTAAAAAGTCTCTCCGATTCGTTGTCCCTCCATTAGCAGTTGGTATGGTCATTGCGGCTACCTGT GATTTCATCATGGATTGCAACGATCCCGAGCCGGTGCATTATTCCCCACAACTTGCTCCTACGGCTATCTTTGTC GGCGGTACTGCAGGTATCGGCCGTGCTATGGTCGAAAACTTTGGCAATCGTACACTGGGAGACGCCAACATCGTC ATCATCGGACGAAACCGCGCCGCAGCAGAAGAGATCATCGCCCAGCTACCAAAAACAAAAGACCCAAATGTCAAA CACGAATTCGTTCAATGTGATGTGTCTCGTATGAAAAACGTCCGTGAAGCGACACAACAAGTCCTCTCGCGCCAT CCTAAAATCAATTTCCTGGTTTTGACTGCTGGTTTGATGTCGACGAAGGGAAGAAATGAGACGGAGGAAGGTCTG GATGCCAAACTTGCTGTTCATTATTATTCAAGATGGGCGTTTATCAAAGGCTTTATGCCCGCTCTGGAGAAAGCC ATTGAGGGGAAGGAGGATGGGAAAGTGATTTCTGTGCTCGCTGCTGGGGAGGGCCAGGGAAGAATCGATATGACT GATCTGGGACTTGCAAGGACATTCTCGCTCAGCCGCGCTGCGTCGCATGCTGCAACATACAATGACTTGATGGTT GATGAGTTCGCATCTCGTCACCCAGGACTCACTTTTATCCATGCGTACCCCGGCTTCGTTCGCACTAACTTGTTA TCATCGTCAGATTCAAGCGCACTCCAAATCGCTGGCCCCGTTTTGAACTATCTTTTGTCGCCGTTGATGTTACGT CCAAATCGTTGTGCGACAAGAATGTGGGCTGGTGTATTCAACCATACCGGAGGCGCTCATCAGTTGTCGTCGTTG GGGAGGGGGTTGGAGACACCGTTTCATGGCACACTTGACCAAAGACAAAAGCTTTGGGCGCATACTGCCCAGATC ACAGGGGTGACGAGTAAATGA |
| Gene | >Agabi119p4|028360 ATGCAAGTAGTTAAAAAGTCTCTCCGATTCGTTGTCCCTCCATTAGCAGTTGGTATGGTCATTGCGGCTACCTGT GATTTCATCATGGATTGCAACGATCCCGAGCCGGTGCATTATTCCCCACAACTTGCTCCTACGGCTATCTTTGTC GGCGGTACTGCAGGTATCGGCCGTGCTATGGTCGAAAACTTTGGCAATCGTACACTGGGAGACGCCAACATCGTC ATCATCGGACGAAACCGCGCCGCAGCAGAAGAGATCATCGCCCAGCTACCAAAAACAAAAGACCCAAATGTCAAA CACGAATTCGTTCAATGTGATGTGTCTCGTATGAAAAACGTCCGTGAAGCGACACAACAAGTCCTCTCGCGCCAT CCTAAAATCAATTTCCTGGTTTTGACTGCTGGTTTGATGTCGACGAAGGGAAGAAATGAGACGGAGGAAGGTCTG GATGCCAAACTTGCTGTTCATTATTATTCAAGATGGGCGTTTATCAAAGGCTTTATGCCCGCTCTGGAGAAAGCC ATTGAGGGGAAGGAGGATGGGAAAGTGATTTCTGTGCTCGCTGCTGGGGAGGGCCAGGGAAGAATCGATATGACT GATCTGGGACTTGCAAGGACATTCTCGCTCAGCCGCGCTGCGTCGCATGCTGCAACATACAATGACTTGATGGTT GATGTAAGTCTCACAGAGTCTGACTCCCTCAACTGTTTCTGACCCACCCGTTCTCTCACACAGGAGTTCGCATCT CGTCACCCAGGACTCACTTTTATCCATGCGTACCCCGGCTTCGTTCGCACTAACTTGTTATCATCGTCAGATTCA AGCGCACTCCAAATCGCTGGCCCCGTTTTGAACTATCTTTTGTCGCCGTTGATGTTACGTCCAAATCGTTGTGCG ACAAGAATGTGGGCTGGTGTATTCAACCATACCGGAGGCGCTCATCAGTTGTCGTCGTTGGGGAGGGGGTTGGAG ACACCGTTTCATGGCACACTTGACCAAAGACAAAAGCTTTGGGCGCATACTGCCCAGATCACAGGGGTGACGAGT AAATGA |