Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|028350
Gene name
Locationscaffold_12:56431..57681
Strand-
Gene length (bp)1250
Transcript length (bp)1020
Coding sequence length (bp)1020
Protein length (aa) 340

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12849 PBP_like_2 PBP superfamily domain 2.7E-09 61 264

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|028350
MKVTLRFYALLAVLSAPLAVVQAQSSTSDSLLPAAVYNGGHNGTTKVGLRIANGGAGQSGLIGAWGDAFINYMVG
KGHEPFTVEWYLGDTTQSIEYLEKGQVDVAVTYNEAAERQVYDSGLVSAWLYGFHDHFYFVGPPSNPAQLSTNDS
ILAMARKIVQVGNQQAAVPPTNGTVTRFLSRYDKSATNIKESEIFIKIGQVPWAYAYSKWYHQYPRFPIQALEAA
SLLSEYTLTDRGTWLSSSSDVRSRLTIFKAGTDNETDILLNPARVLIAKEDNLVDKEIGQAFGEWVVLYDEQNKT
GGQNVIETFTGTGQTGETKEPLYTRAPVNWSPANSTAGQ*
Coding >Agabi119p4|028350
ATGAAAGTCACACTCAGGTTTTATGCATTGCTAGCGGTCCTCTCTGCCCCCCTTGCTGTGGTTCAAGCCCAGTCT
AGTACTTCTGACTCTTTGTTGCCTGCAGCTGTCTATAATGGCGGTCATAATGGTACAACAAAAGTTGGCCTACGT
ATTGCTAACGGAGGCGCTGGACAGTCGGGGCTAATTGGCGCCTGGGGCGACGCGTTTATCAACTACATGGTCGGT
AAAGGCCATGAACCTTTTACCGTGGAGTGGTATCTGGGCGATACGACCCAGAGTATTGAGTATTTGGAGAAAGGT
CAGGTAGATGTTGCTGTGACCTACAATGAGGCTGCGGAACGGCAGGTCTACGATTCTGGGCTGGTGTCCGCTTGG
CTCTACGGTTTTCATGATCATTTCTATTTTGTCGGACCTCCGAGTAACCCAGCCCAACTTTCCACCAACGATTCT
ATTCTTGCCATGGCGCGTAAGATCGTCCAGGTCGGAAATCAACAAGCTGCAGTCCCACCAACTAATGGCACTGTC
ACCCGTTTTCTTTCTCGGTATGACAAAAGTGCCACGAACATCAAGGAAAGTGAGATTTTCATCAAGATCGGCCAA
GTTCCATGGGCTTATGCCTACTCGAAATGGTACCATCAATACCCGCGTTTCCCCATTCAAGCACTTGAAGCTGCC
TCCCTTCTGAGTGAATATACGCTCACCGACCGTGGAACATGGCTATCGAGCTCTTCAGACGTTCGATCGAGGTTG
ACGATTTTCAAAGCCGGAACTGATAACGAGACGGATATATTATTGAATCCCGCTCGCGTTTTGATCGCCAAAGAA
GATAATCTGGTTGATAAAGAAATTGGTCAAGCTTTTGGTGAATGGGTGGTTTTGTATGATGAACAGAACAAGACT
GGTGGGCAGAATGTGATTGAGACTTTCACGGGAACTGGACAGACTGGAGAAACGAAGGAGCCTCTGTATACCCGC
GCACCAGTGAACTGGTCTCCTGCCAATTCGACAGCTGGCCAGTAG
Transcript >Agabi119p4|028350
ATGAAAGTCACACTCAGGTTTTATGCATTGCTAGCGGTCCTCTCTGCCCCCCTTGCTGTGGTTCAAGCCCAGTCT
AGTACTTCTGACTCTTTGTTGCCTGCAGCTGTCTATAATGGCGGTCATAATGGTACAACAAAAGTTGGCCTACGT
ATTGCTAACGGAGGCGCTGGACAGTCGGGGCTAATTGGCGCCTGGGGCGACGCGTTTATCAACTACATGGTCGGT
AAAGGCCATGAACCTTTTACCGTGGAGTGGTATCTGGGCGATACGACCCAGAGTATTGAGTATTTGGAGAAAGGT
CAGGTAGATGTTGCTGTGACCTACAATGAGGCTGCGGAACGGCAGGTCTACGATTCTGGGCTGGTGTCCGCTTGG
CTCTACGGTTTTCATGATCATTTCTATTTTGTCGGACCTCCGAGTAACCCAGCCCAACTTTCCACCAACGATTCT
ATTCTTGCCATGGCGCGTAAGATCGTCCAGGTCGGAAATCAACAAGCTGCAGTCCCACCAACTAATGGCACTGTC
ACCCGTTTTCTTTCTCGGTATGACAAAAGTGCCACGAACATCAAGGAAAGTGAGATTTTCATCAAGATCGGCCAA
GTTCCATGGGCTTATGCCTACTCGAAATGGTACCATCAATACCCGCGTTTCCCCATTCAAGCACTTGAAGCTGCC
TCCCTTCTGAGTGAATATACGCTCACCGACCGTGGAACATGGCTATCGAGCTCTTCAGACGTTCGATCGAGGTTG
ACGATTTTCAAAGCCGGAACTGATAACGAGACGGATATATTATTGAATCCCGCTCGCGTTTTGATCGCCAAAGAA
GATAATCTGGTTGATAAAGAAATTGGTCAAGCTTTTGGTGAATGGGTGGTTTTGTATGATGAACAGAACAAGACT
GGTGGGCAGAATGTGATTGAGACTTTCACGGGAACTGGACAGACTGGAGAAACGAAGGAGCCTCTGTATACCCGC
GCACCAGTGAACTGGTCTCCTGCCAATTCGACAGCTGGCCAGTAG
Gene >Agabi119p4|028350
ATGAAAGTCACACTCAGGTTTTATGCATTGCTAGCGGTCCTCTCTGCCCCCCTTGCTGTGGTTCAAGCCCAGTCT
AGTACTTCTGACTCTTTGTTGCCTGCAGCTGTCTATAATGGCGGTCATAATGGTACAACAAAAGTTGGCCTACGT
ATTGCTAACGGAGGCGCTGGACAGTCGGGGCTAATTGGCGCCTGGGGCGACGCGTTTATCAACTACATGGTCGGT
AAAGGCCATGAACCTTTTACCGTGAGTCTATCCGTTAGGTTTATTAAGACTGTTACTGACAATTGCTGTTAGGTG
GAGTGGTATCTGGGCGATACGACCCAGAGTATTGAGTATTTGGAGAAAGGTCAGGTAGATGTTGCTGTGACCTAC
AATGAGGCTGCGGAACGGCAGGTCTACGATTCTGGGCTGGTGTCCGCTTGGCTCTACGGTTTTCATGTGAGTACG
AGTGCTGGGGTCATATTTGATATGACATTTTGACGTTCTACGTCTAGGATCATTTCTATTTTGTCGGACCTCCGA
GTAACCCAGCCCAACTTTCCACCAACGATTCTATTCTTGCCATGGCGCGTAAGATCGTCCAGGTCGGAAATCAAC
AAGCTGCAGTAAGATATTTTTTCCATGAACATACGAAACTTAAACTTATGCTATTCGAATTCGCGTTAGGTCCCA
CCAACTAATGGCACTGTCACCCGTTTTCTTTCTCGGTATGACAAAAGTGCCACGAACATCAAGGAAAGTGAGATT
TTCATCAAGATCGGCCAAGTGGGTTTTCCAAAAAGAACTATGGGATGTCAAAATGGCTGACATTCTTCCTTGGAC
CTTAGGTTCCATGGGCTTATGCCTACTCGAAATGGTACCATCAATACCCGCGTTTCCCCATTCAAGCACTTGAAG
CTGCCTCCCTTCTGAGTGAATATACGCTCACCGACCGTGGAACATGGCTATCGAGCTCTTCAGACGTTCGATCGA
GGTTGACGATTTTCAAAGCCGGAACTGATAACGAGACGGATATATTATTGAATCCCGCTCGCGTTTTGATCGCCA
AAGAAGATAATCTGGTTGATAAAGAAATTGGTCAAGCTTTTGGTGAATGGGTGGTTTTGTATGATGAACAGAACA
AGACTGGTGGGCAGAATGTGATTGAGACTTTCACGGGAACTGGACAGACTGGAGAAACGAAGGAGCCTCTGTATA
CCCGCGCACCAGTGAACTGGTCTCCTGCCAATTCGACAGCTGGCCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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