© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|027950 |
| Gene name | |
| Location | scaffold_11:1883842..1884388 |
| Strand | - |
| Gene length (bp) | 546 |
| Transcript length (bp) | 438 |
| Coding sequence length (bp) | 438 |
| Protein length (aa) | 146 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00011 | HSP20 | Hsp20/alpha crystallin family | 3.6E-21 | 48 | 144 |
| PF17886 | ArsA_HSP20 | HSP20-like domain found in ArsA | 2.2E-10 | 56 | 130 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14368|HSP16_SCHPO | Heat shock protein 16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hsp16 PE=1 SV=1 | 8 | 144 | 7.0E-21 |
| sp|Q4UJB1|HSPC4_RICFE | Small heat shock protein C4 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=hspc4-1 PE=3 SV=1 | 33 | 145 | 1.0E-15 |
| sp|P27879|HSP11_MEDSA | 18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1 | 4 | 132 | 2.0E-15 |
| sp|P27880|HSP12_MEDSA | 18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1 | 4 | 132 | 2.0E-15 |
| sp|P02519|HSP11_SOYBN | 17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1 | 4 | 132 | 3.0E-15 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14368|HSP16_SCHPO | Heat shock protein 16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hsp16 PE=1 SV=1 | 8 | 144 | 7.0E-21 |
| sp|Q4UJB1|HSPC4_RICFE | Small heat shock protein C4 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=hspc4-1 PE=3 SV=1 | 33 | 145 | 1.0E-15 |
| sp|P27879|HSP11_MEDSA | 18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1 | 4 | 132 | 2.0E-15 |
| sp|P27880|HSP12_MEDSA | 18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1 | 4 | 132 | 2.0E-15 |
| sp|P02519|HSP11_SOYBN | 17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1 | 4 | 132 | 3.0E-15 |
| sp|P13853|HS17C_ARATH | 17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2 | 4 | 144 | 7.0E-15 |
| sp|Q9LNW0|HS178_ARATH | 17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=1 SV=1 | 33 | 132 | 5.0E-14 |
| sp|P19244|HSP41_PEA | 22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1 | 6 | 145 | 6.0E-14 |
| sp|Q84J50|HS177_ORYSJ | 17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1 | 40 | 144 | 6.0E-14 |
| sp|Q38806|HSP22_ARATH | 22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1 | 6 | 145 | 1.0E-13 |
| sp|P80485|ASP1_STRTR | Acid shock protein OS=Streptococcus thermophilus PE=1 SV=2 | 40 | 144 | 2.0E-13 |
| sp|Q9XIE3|HS17A_ARATH | 17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1 | 35 | 132 | 3.0E-13 |
| sp|Q06823|SP21_STIAD | Spore protein SP21 OS=Stigmatella aurantiaca (strain DW4/3-1) GN=hspA PE=1 SV=2 | 7 | 145 | 1.0E-12 |
| sp|Q84Q77|HS17A_ORYSJ | 17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1 | 40 | 132 | 1.0E-12 |
| sp|Q7XUW5|HS232_ORYSJ | 23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2 | 4 | 145 | 2.0E-12 |
| sp|P05478|HSP16_SOYBN | 18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1 | 33 | 132 | 2.0E-12 |
| sp|P04795|HSP15_SOYBN | 17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1 | 7 | 132 | 2.0E-12 |
| sp|P04794|HSP14_SOYBN | 17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1 | 7 | 132 | 2.0E-12 |
| sp|O30851|ASP2_STRTR | Heat shock protein HSP.16.4 OS=Streptococcus thermophilus PE=3 SV=1 | 40 | 134 | 3.0E-12 |
| sp|Q4UKR8|HSPC2_RICFE | Small heat shock protein C2 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=hspC2 PE=3 SV=1 | 47 | 132 | 4.0E-12 |
| sp|O74984|HSP15_SCHPO | Heat shock protein homolog C338.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC338.06c PE=3 SV=1 | 23 | 144 | 1.0E-11 |
| sp|P04793|HSP13_SOYBN | 17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1 | 4 | 132 | 1.0E-11 |
| sp|P30236|HSP41_SOYBN | 22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1 | 6 | 145 | 3.0E-11 |
| sp|Q9SSQ8|HS26M_ARATH | 26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP26.5 PE=2 SV=1 | 48 | 144 | 3.0E-11 |
| sp|Q03928|HSP18_CLOAB | 18 kDa heat shock protein OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=hsp18 PE=2 SV=1 | 40 | 132 | 5.0E-11 |
| sp|Q943Q3|HS166_ORYSJ | 16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1 | 19 | 132 | 8.0E-11 |
| sp|P81958|HSP16_ONYPE | Probable Hsp20 family chaperone OS=Onion yellows phytoplasma (strain OY-M) GN=PAM_028 PE=1 SV=1 | 13 | 129 | 1.0E-10 |
| sp|P12811|HS22C_CHLRE | Heat shock 22 kDa protein, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1 | 56 | 144 | 2.0E-10 |
| sp|P12810|HS16A_WHEAT | 16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1 | 7 | 133 | 9.0E-10 |
| sp|Q84Q72|HS181_ORYSJ | 18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1 | 40 | 144 | 2.0E-09 |
| sp|Q9ZW31|HS17B_ARATH | 17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1 | 7 | 133 | 3.0E-09 |
| sp|P31673|HS174_ORYSJ | 17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2 | 4 | 144 | 3.0E-09 |
| sp|Q95661|HS21C_SOLLC | Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1 | 34 | 133 | 4.0E-09 |
| sp|Q41560|HS16B_WHEAT | 16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1 | 7 | 133 | 4.0E-09 |
| sp|P30693|HSP11_HELAN | 17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1 | 33 | 139 | 5.0E-09 |
| sp|P19036|HSP17_ARATH | 17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2 | 40 | 132 | 6.0E-09 |
| sp|Q93TV7|HSP15_LEPIN | Probable 15 kDa heat shock protein OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) GN=hsp15 PE=3 SV=1 | 36 | 135 | 1.0E-08 |
| sp|Q72QA1|HSP15_LEPIC | Probable 15 kDa heat shock protein OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) GN=hsp15 PE=3 SV=1 | 36 | 135 | 1.0E-08 |
| sp|P09886|HS21C_PEA | Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1 | 52 | 133 | 1.0E-08 |
| sp|P27396|HSP11_DAUCA | 17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1 | 41 | 132 | 1.0E-08 |
| sp|P19037|HS181_ARATH | 18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1 | 7 | 144 | 2.0E-08 |
| sp|P09887|HS22C_SOYBN | Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1 | 52 | 133 | 3.0E-08 |
| sp|P30222|HS22C_PETHY | Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1 | 34 | 144 | 3.0E-08 |
| sp|Q943E7|HS16C_ORYSJ | 16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1 | 6 | 133 | 4.0E-08 |
| sp|P05477|HSP21_SOYBN | 17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1 | 56 | 129 | 9.0E-08 |
| sp|O82012|HSP12_SOLPE | 17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1 | 19 | 143 | 1.0E-07 |
| sp|O81822|HS177_ARATH | 17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1 | 57 | 129 | 1.0E-07 |
| sp|Q943E6|HS16B_ORYSJ | 16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1 | 7 | 133 | 1.0E-07 |
| sp|P31170|HS25P_ARATH | 25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1 | 34 | 133 | 1.0E-07 |
| sp|Q54I91|HSPI_DICDI | Small heat shock protein hspI, mitochondrial OS=Dictyostelium discoideum GN=hspI PE=3 SV=1 | 35 | 134 | 2.0E-07 |
| sp|P19243|HSP11_PEA | 18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1 | 7 | 132 | 2.0E-07 |
| sp|P02520|HSP12_SOYBN | Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1 | 74 | 132 | 2.0E-07 |
| sp|Q53595|HSP18_STRAL | 18 kDa heat shock protein OS=Streptomyces albus G GN=hsp18 PE=1 SV=1 | 55 | 131 | 3.0E-07 |
| sp|Q05832|HSP11_OXYRB | 18.3 kDa class I heat shock protein OS=Oxybasis rubra GN=HSP18 PE=2 SV=1 | 40 | 144 | 3.0E-07 |
| sp|P29830|HS176_ARATH | 17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1 | 50 | 129 | 4.0E-07 |
| sp|P46516|HSP21_HELAN | 17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1 | 57 | 129 | 5.0E-07 |
| sp|P27777|HS16A_ORYSJ | 16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1 | 7 | 133 | 5.0E-07 |
| sp|P30221|HSP11_SOLLC | 17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1 | 33 | 132 | 6.0E-07 |
| sp|Q01544|HSP21_IPONI | 17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1 | 56 | 141 | 8.0E-07 |
| sp|O82011|HSP11_SOLPE | 17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1 | 33 | 132 | 9.0E-07 |
| sp|Q6Z6L5|HSP19_ORYSJ | 19.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP19.0 PE=3 SV=1 | 41 | 130 | 1.0E-06 |
| sp|Q01545|HSP22_IPONI | 18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1 | 57 | 129 | 2.0E-06 |
| sp|P19242|HSP21_PEA | 17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1 | 57 | 129 | 3.0E-06 |
| sp|Q652V8|HSP16_ORYSJ | 16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1 | 58 | 145 | 3.0E-06 |
| sp|P46731|18K2_MYCAV | 18 kDa antigen 2 OS=Mycobacterium avium PE=3 SV=1 | 4 | 144 | 3.0E-06 |
| sp|Q54VP4|Y0215_DICDI | Heat shock protein DDB_G0280215 OS=Dictyostelium discoideum GN=DDB_G0280215 PE=3 SV=1 | 9 | 133 | 3.0E-06 |
| sp|P15992|HSP26_YEAST | Heat shock protein 26 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HSP26 PE=1 SV=3 | 58 | 140 | 7.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|027950 MAHLTFYEPFFDLEQLVKPFGTSRLNINSVIPSSGVLKPKLDLHENTQKNLITATFELPGVKKEDVQLDIHNGIL IISAENKASSEHEENGYAIRERRFGKMSRSLRLPQGIKDEDIRAAMADGVLTITFPKSSPDQEPKKISIA* |
| Coding | >Agabi119p4|027950 ATGGCCCATCTCACTTTCTACGAGCCTTTTTTCGACCTTGAACAACTCGTCAAGCCATTTGGTACCTCCCGTCTG AACATCAACTCTGTTATACCTTCCTCGGGAGTGCTCAAACCAAAGTTGGACTTGCACGAAAATACTCAGAAGAAT CTCATCACAGCCACATTCGAGCTCCCTGGCGTCAAAAAGGAAGACGTCCAGTTAGATATTCACAACGGCATTCTC ATCATTTCCGCTGAGAACAAAGCTTCGTCGGAACATGAAGAGAATGGGTACGCCATCCGTGAACGACGATTTGGC AAAATGTCGAGGTCATTGCGACTTCCTCAGGGCATTAAAGATGAGGACATTAGAGCCGCAATGGCAGATGGCGTA TTGACAATCACTTTCCCCAAATCGTCGCCAGACCAAGAACCAAAGAAGATCTCTATCGCTTAG |
| Transcript | >Agabi119p4|027950 ATGGCCCATCTCACTTTCTACGAGCCTTTTTTCGACCTTGAACAACTCGTCAAGCCATTTGGTACCTCCCGTCTG AACATCAACTCTGTTATACCTTCCTCGGGAGTGCTCAAACCAAAGTTGGACTTGCACGAAAATACTCAGAAGAAT CTCATCACAGCCACATTCGAGCTCCCTGGCGTCAAAAAGGAAGACGTCCAGTTAGATATTCACAACGGCATTCTC ATCATTTCCGCTGAGAACAAAGCTTCGTCGGAACATGAAGAGAATGGGTACGCCATCCGTGAACGACGATTTGGC AAAATGTCGAGGTCATTGCGACTTCCTCAGGGCATTAAAGATGAGGACATTAGAGCCGCAATGGCAGATGGCGTA TTGACAATCACTTTCCCCAAATCGTCGCCAGACCAAGAACCAAAGAAGATCTCTATCGCTTAG |
| Gene | >Agabi119p4|027950 ATGGCCCATCTCACTTTCTACGAGCCTTTTTTCGACCTTGAACAACTCGTCAAGCCATTTGGTACCTCCCGTCTG AACATCAACTCTGTTATACCTTCCTCGGGAGTGCTCAAACCAAAGTAAGTGTACTACACATCTTTCTACTTAGTT CTAATCACTAATCGTGTTTACAGGTTGGACTTGCACGAAAATACTCAGAAGAATCTCATCACAGCCACATTCGAG CTCCCTGGCGTCAAAAAGGAAGACGTCCAGTTAGATATTCACAACGGCATTCTCATCATTTCCGCTGAGAACAAA GCTTCGTCGGAACATGAAGAGAATGGGTACGCCATCCGTGAACGACGATTTGGCAAAATGTCGAGGTCATTGCGA CTTCCTCAGGGCATTAAAGTGAGTTATCAATCTTAACAGAGTCATGAACGAAAGACTTACCCCAGTGTCCAGGAT GAGGACATTAGAGCCGCAATGGCAGATGGCGTATTGACAATCACTTTCCCCAAATCGTCGCCAGACCAAGAACCA AAGAAGATCTCTATCGCTTAG |