Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|027720
Gene name
Locationscaffold_11:1690731..1692420
Strand+
Gene length (bp)1689
Transcript length (bp)1578
Coding sequence length (bp)1578
Protein length (aa) 526

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01753 zf-MYND MYND finger 2.0E-09 72 109

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|027720
MSSPDDSDIPEELRASFQRMMRGVKGMPNGNPAKLREIMTGLYNGTLDISEMPGPTGRNREISVPIQKLDKCGVC
FQTTSLRLCNSCASAIYCSRECQRADWRDHKRFCSQTQQINLKVFYPLIAYLFDTLRRQVPKSLDSFPKNIDPYI
LSVYEGFGIRKEPRPLSHPALSQRIIRATMPGPRRATESENTQHHTVVLGDTYNLQISQIPDAAKLAKWWRGKTW
ADAMRFYVHVVRETDILEVTVAVSLLLLSEVYSTRLSKPRSTDDSGKPISEWEPRSGYRLEFGRSPVSDFGICKG
RIQGKANRVQTWTYYHPQPNTRTTVLDSDNHYWMYFRTIKGEEITLDCCSFAYGMTGCVDASPCLTALSEVFRDW
GSTRTPAYFHPSNVQEESHMLIEEQRFSVMQNTLLHGALGWEVSGARDEGQRVRLRQFIHQVQGTPCTPAQEERI
NDFRTHGGLLLDQILVGKCWKDWEKPSVHSRDESFDSGKLRADLFTKASKQDPEYNGKLKGLVGMFMEASGQISN
*
Coding >Agabi119p4|027720
ATGAGCTCTCCAGACGATTCTGATATTCCCGAGGAACTCAGGGCATCTTTCCAACGTATGATGCGAGGCGTCAAA
GGAATGCCTAATGGAAATCCCGCCAAACTGCGGGAAATCATGACGGGCTTATACAATGGCACCTTGGACATTAGT
GAAATGCCTGGACCTACTGGGAGAAACAGAGAAATCTCTGTTCCAATTCAGAAACTCGACAAATGTGGCGTCTGT
TTCCAGACGACCAGCTTGCGTCTCTGTAATTCGTGCGCTTCGGCAATATATTGTTCTCGAGAATGCCAAAGGGCG
GATTGGCGAGATCACAAACGGTTCTGCTCACAAACGCAGCAGATCAATCTCAAAGTATTCTACCCTTTAATCGCC
TACCTCTTTGATACTCTTCGACGCCAAGTCCCCAAATCCTTGGACTCGTTTCCCAAGAATATCGACCCATACATC
TTATCCGTATATGAAGGTTTCGGCATTCGCAAAGAACCACGCCCGCTTTCGCATCCCGCACTTTCTCAAAGAATC
ATTCGAGCTACTATGCCTGGTCCTCGTAGAGCCACGGAATCCGAGAACACGCAACACCATACCGTCGTCCTTGGA
GATACTTACAATCTTCAAATCTCTCAAATCCCTGATGCGGCAAAGTTAGCCAAGTGGTGGAGAGGTAAAACCTGG
GCTGATGCTATGCGGTTTTACGTGCATGTTGTACGAGAAACGGATATTCTGGAAGTCACTGTCGCTGTTTCCCTT
CTCCTCCTTTCCGAGGTTTATTCGACGCGCCTGTCTAAACCTCGTAGCACCGACGACTCGGGGAAACCCATTTCG
GAATGGGAGCCACGTTCCGGTTACCGCCTTGAATTCGGGCGTAGTCCCGTTAGCGACTTCGGTATCTGCAAGGGC
AGAATCCAAGGAAAGGCGAATCGCGTTCAAACCTGGACTTATTACCACCCCCAACCAAACACTAGAACGACTGTA
CTTGATTCCGATAATCATTATTGGATGTACTTCCGCACCATCAAAGGCGAAGAAATCACCCTCGATTGTTGTAGT
TTTGCTTATGGGATGACGGGTTGCGTCGACGCTTCGCCTTGCCTCACGGCGCTTTCCGAAGTATTCAGGGATTGG
GGAAGCACGCGTACACCTGCATACTTCCACCCTTCGAATGTTCAAGAAGAATCCCACATGCTCATCGAAGAACAA
CGTTTCTCTGTAATGCAAAATACACTCTTGCATGGCGCACTTGGCTGGGAGGTATCTGGCGCACGCGACGAAGGC
CAACGCGTACGTCTACGTCAATTCATACACCAAGTTCAAGGAACACCATGTACGCCTGCTCAAGAAGAGCGAATT
AACGATTTTCGCACTCATGGTGGACTTTTGTTGGATCAAATCTTGGTCGGAAAGTGTTGGAAGGATTGGGAGAAA
CCGAGTGTTCATAGTCGGGACGAGTCTTTCGATTCCGGTAAGTTGAGAGCGGATCTGTTTACGAAAGCATCGAAG
CAAGACCCTGAGTACAATGGCAAACTGAAAGGATTGGTGGGCATGTTCATGGAGGCGTCAGGGCAGATATCAAAT
TGA
Transcript >Agabi119p4|027720
ATGAGCTCTCCAGACGATTCTGATATTCCCGAGGAACTCAGGGCATCTTTCCAACGTATGATGCGAGGCGTCAAA
GGAATGCCTAATGGAAATCCCGCCAAACTGCGGGAAATCATGACGGGCTTATACAATGGCACCTTGGACATTAGT
GAAATGCCTGGACCTACTGGGAGAAACAGAGAAATCTCTGTTCCAATTCAGAAACTCGACAAATGTGGCGTCTGT
TTCCAGACGACCAGCTTGCGTCTCTGTAATTCGTGCGCTTCGGCAATATATTGTTCTCGAGAATGCCAAAGGGCG
GATTGGCGAGATCACAAACGGTTCTGCTCACAAACGCAGCAGATCAATCTCAAAGTATTCTACCCTTTAATCGCC
TACCTCTTTGATACTCTTCGACGCCAAGTCCCCAAATCCTTGGACTCGTTTCCCAAGAATATCGACCCATACATC
TTATCCGTATATGAAGGTTTCGGCATTCGCAAAGAACCACGCCCGCTTTCGCATCCCGCACTTTCTCAAAGAATC
ATTCGAGCTACTATGCCTGGTCCTCGTAGAGCCACGGAATCCGAGAACACGCAACACCATACCGTCGTCCTTGGA
GATACTTACAATCTTCAAATCTCTCAAATCCCTGATGCGGCAAAGTTAGCCAAGTGGTGGAGAGGTAAAACCTGG
GCTGATGCTATGCGGTTTTACGTGCATGTTGTACGAGAAACGGATATTCTGGAAGTCACTGTCGCTGTTTCCCTT
CTCCTCCTTTCCGAGGTTTATTCGACGCGCCTGTCTAAACCTCGTAGCACCGACGACTCGGGGAAACCCATTTCG
GAATGGGAGCCACGTTCCGGTTACCGCCTTGAATTCGGGCGTAGTCCCGTTAGCGACTTCGGTATCTGCAAGGGC
AGAATCCAAGGAAAGGCGAATCGCGTTCAAACCTGGACTTATTACCACCCCCAACCAAACACTAGAACGACTGTA
CTTGATTCCGATAATCATTATTGGATGTACTTCCGCACCATCAAAGGCGAAGAAATCACCCTCGATTGTTGTAGT
TTTGCTTATGGGATGACGGGTTGCGTCGACGCTTCGCCTTGCCTCACGGCGCTTTCCGAAGTATTCAGGGATTGG
GGAAGCACGCGTACACCTGCATACTTCCACCCTTCGAATGTTCAAGAAGAATCCCACATGCTCATCGAAGAACAA
CGTTTCTCTGTAATGCAAAATACACTCTTGCATGGCGCACTTGGCTGGGAGGTATCTGGCGCACGCGACGAAGGC
CAACGCGTACGTCTACGTCAATTCATACACCAAGTTCAAGGAACACCATGTACGCCTGCTCAAGAAGAGCGAATT
AACGATTTTCGCACTCATGGTGGACTTTTGTTGGATCAAATCTTGGTCGGAAAGTGTTGGAAGGATTGGGAGAAA
CCGAGTGTTCATAGTCGGGACGAGTCTTTCGATTCCGGTAAGTTGAGAGCGGATCTGTTTACGAAAGCATCGAAG
CAAGACCCTGAGTACAATGGCAAACTGAAAGGATTGGTGGGCATGTTCATGGAGGCGTCAGGGCAGATATCAAAT
TGA
Gene >Agabi119p4|027720
ATGAGCTCTCCAGACGATTCTGATATTCCCGAGGAACTCAGGGCATCTTTCCAACGTATGATGCGAGGCGTCAAA
GGAATGCCTAATGGAAATCCCGCCAAACTGCGGGAAATCATGACGGGCTTATACAATGGCACCTTGGACATTAGT
GAAATGCCTGGACCTACTGGGAGAAACAGAGAAATCTCTGTTCCAATTCAGAAACTCGACAAATGTGGCGTCTGT
TTCCAGACGACCAGCTTGCGTCTCTGTAATTCGTGCGCTTCGGTATGTACTTGGTTTTCGTCTGAATTGACAATT
CGGTGCTGAATATCTGATGTGGTAGGCAATATATTGTTCTCGAGAATGCCAAAGGGCGGATTGGCGAGATCACAA
ACGGTTCTGCTGTACGTCTCACCCGTCCGCATGTTGAAATGCTCTCGATCTTAGATCCTTCAAGCACAAACGCAG
CAGATCAATCTCAAAGTATTCTACCCTTTAATCGCCTACCTCTTTGATACTCTTCGACGCCAAGTCCCCAAATCC
TTGGACTCGTTTCCCAAGAATATCGACCCATACATCTTATCCGTATATGAAGGTTTCGGCATTCGCAAAGAACCA
CGCCCGCTTTCGCATCCCGCACTTTCTCAAAGAATCATTCGAGCTACTATGCCTGGTCCTCGTAGAGCCACGGAA
TCCGAGAACACGCAACACCATACCGTCGTCCTTGGAGATACTTACAATCTTCAAATCTCTCAAATCCCTGATGCG
GCAAAGTTAGCCAAGTGGTGGAGAGGTAAAACCTGGGCTGATGCTATGCGGTTTTACGTGCATGTTGTACGAGAA
ACGGATATTCTGGAAGTCACTGTCGCTGTTTCCCTTCTCCTCCTTTCCGAGGTTTATTCGACGCGCCTGTCTAAA
CCTCGTAGCACCGACGACTCGGGGAAACCCATTTCGGAATGGGAGCCACGTTCCGGTTACCGCCTTGAATTCGGG
CGTAGTCCCGTTAGCGACTTCGGTATCTGCAAGGGCAGAATCCAAGGAAAGGCGAATCGCGTTCAAACCTGGACT
TATTACCACCCCCAACCAAACACTAGAACGACTGTACTTGATTCCGATAATCATTATTGGATGTACTTCCGCACC
ATCAAAGGCGAAGAAATCACCCTCGATTGTTGTAGTTTTGCTTATGGGATGACGGGTTGCGTCGACGCTTCGCCT
TGCCTCACGGCGCTTTCCGAAGTATTCAGGGATTGGGGAAGCACGCGTACACCTGCATACTTCCACCCTTCGAAT
GTTCAAGAAGAATCCCACATGCTCATCGAAGAACAACGTTTCTCTGTAATGCAAAATACACTCTTGCATGGCGCA
CTTGGCTGGGAGGTATCTGGCGCACGCGACGAAGGCCAACGCGTACGTCTACGTCAATTCATACACCAAGTTCAA
GGAACACCATGTACGCCTGCTCAAGAAGAGCGAATTAACGATTTTCGCACTCATGGTGGACTTTTGTTGGATCAA
ATCTTGGTCGGAAAGTGTTGGAAGGATTGGGAGAAACCGAGTGTTCATAGTCGGGACGAGTCTTTCGATTCCGGT
AAGTTGAGAGCGGATCTGTTTACGAAAGCATCGAAGCAAGACCCTGAGTACAATGGCAAACTGAAAGGATTGGTG
GGCATGTTCATGGAGGCGTCAGGGCAGATATCAAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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