Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|026650
Gene name
Locationscaffold_11:1402082..1403530
Strand+
Gene length (bp)1448
Transcript length (bp)1398
Coding sequence length (bp)1398
Protein length (aa) 466

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12929 Mid1 Stretch-activated Ca2+-permeable channel component 6.9E-48 99 437

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P41821|MID1_YEAST Stretch-activated cation channel MID1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MID1 PE=1 SV=1 172 437 1.0E-18
sp|Q10063|EHS1_SCHPO Calcium influx-promoting protein ehs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ehs1 PE=3 SV=1 213 432 8.0E-16

GO

GO Term Description Terminal node
GO:0098703 calcium ion import across plasma membrane Yes
GO:0005262 calcium channel activity Yes
GO:0030001 metal ion transport No
GO:0008324 cation transmembrane transporter activity No
GO:0098657 import into cell No
GO:0099587 inorganic ion import across plasma membrane No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0015085 calcium ion transmembrane transporter activity No
GO:0097553 calcium ion transmembrane import into cytosol No
GO:0009987 cellular process No
GO:0098659 inorganic cation import across plasma membrane No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0098662 inorganic cation transmembrane transport No
GO:0006812 cation transport No
GO:0005216 ion channel activity No
GO:0003674 molecular_function No
GO:0005261 cation channel activity No
GO:0022857 transmembrane transporter activity No
GO:0055085 transmembrane transport No
GO:0046873 metal ion transmembrane transporter activity No
GO:0051179 localization No
GO:0015267 channel activity No
GO:0008150 biological_process No
GO:0015075 ion transmembrane transporter activity No
GO:0098655 cation transmembrane transport No
GO:0005215 transporter activity No
GO:0098739 import across plasma membrane No
GO:0034220 ion transmembrane transport No
GO:0098660 inorganic ion transmembrane transport No
GO:0006816 calcium ion transport No
GO:0070588 calcium ion transmembrane transport No
GO:0051234 establishment of localization No
GO:0006811 ion transport No
GO:0006810 transport No
GO:0022803 passive transmembrane transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|026650
MLLLCLLSLLLATHAQQVRLSLNTVARFDSSSSSFDIPPQDQLSISIALCSPSTPPRVIISTDDLDVHEVILKDG
FGLFTGSFEKGGVIALDGLSPGASFELGLSTNGPLHEIVSRDPLFGDSTNNQAILFSHPFAFPPPTPPPQFPNYT
LPAANATLPDPPSSLPNLTLIVSQTSNTPLLRTSCFLNSSAVKAEGKIINSSSWLRSPEDGWRIEYLLAGLEPQT
NYTAFIIQDDYKVSGPIYFFTKSTSFQCTLVHSLPYCPATSYSIPLSPPSTSIGQFPIYDTTSLPRQLQDTFIRT
LQNFTVALSTFACGRDFYSPVVGCEECQKEYRKWLCTVVFPRCTEPSPGNPDFVVWDSSLNGVVNAQLPGSQTVV
SALLPMPSSSTQTPFMNQAYMKLLPCIETCTSVDRACPPFLQFRCPNSMFNGAASYGFGYMDGGGLDGRWGGGVV
DSAQDGWGNVWCNAG*
Coding >Agabi119p4|026650
ATGCTCCTGCTCTGTCTGCTGTCTCTCCTCCTCGCCACGCACGCACAGCAAGTGCGACTCTCGCTCAACACCGTC
GCTCGCTTCGACTCTTCCTCCTCCTCCTTTGATATCCCTCCCCAAGACCAGCTCTCCATCTCTATCGCTCTCTGC
TCACCCTCCACCCCTCCCCGCGTCATTATCTCGACTGATGATCTAGACGTGCACGAGGTCATTCTAAAAGACGGT
TTCGGTCTCTTTACCGGATCTTTTGAGAAGGGAGGGGTCATCGCACTCGATGGCCTATCCCCAGGGGCTTCTTTC
GAACTTGGCCTCTCCACCAACGGCCCCCTGCACGAGATAGTATCCCGCGATCCCCTCTTTGGCGACTCTACGAAC
AATCAAGCCATCCTCTTTTCCCACCCCTTCGCCTTTCCTCCACCCACTCCCCCTCCCCAATTTCCCAATTACACT
TTACCAGCAGCAAATGCTACACTACCAGACCCTCCTTCTTCACTCCCAAACCTCACTCTTATCGTTTCACAAACA
TCCAACACTCCCCTACTCCGCACATCCTGTTTTCTAAACTCTTCGGCCGTCAAAGCCGAGGGAAAAATCATCAAC
AGCTCATCGTGGTTACGGAGTCCAGAAGACGGTTGGAGGATTGAATATCTATTGGCTGGATTAGAACCTCAAACC
AATTATACCGCTTTTATAATTCAAGATGACTATAAAGTGTCTGGTCCAATTTACTTTTTCACCAAATCGACTTCA
TTTCAATGTACACTCGTGCATTCTCTACCTTATTGCCCAGCAACATCGTATTCCATTCCCCTCTCCCCTCCCAGC
ACTTCCATCGGCCAATTTCCAATATACGATACCACGTCGTTACCTCGACAACTTCAAGATACCTTTATACGCACT
TTACAAAATTTTACGGTGGCTCTTTCGACGTTTGCGTGTGGAAGAGATTTTTATTCTCCGGTTGTGGGATGTGAA
GAATGTCAAAAGGAATATCGGAAATGGCTTTGTACGGTTGTGTTTCCTAGGTGTACGGAACCTAGTCCTGGGAAT
CCTGATTTTGTGGTTTGGGATTCGAGTTTGAATGGGGTTGTGAATGCTCAACTTCCTGGATCTCAAACTGTCGTA
TCCGCTTTGTTACCTATGCCTTCCTCATCAACGCAGACACCGTTTATGAATCAAGCATATATGAAATTGTTACCC
TGTATAGAAACATGTACGTCTGTCGATCGAGCATGTCCACCCTTTCTTCAATTTAGATGTCCGAATTCGATGTTT
AATGGGGCGGCGAGTTATGGGTTTGGGTATATGGATGGTGGGGGGTTGGATGGGAGGTGGGGGGGTGGGGTTGTG
GATAGTGCGCAGGATGGGTGGGGGAATGTGTGGTGTAATGCGGGGTAA
Transcript >Agabi119p4|026650
ATGCTCCTGCTCTGTCTGCTGTCTCTCCTCCTCGCCACGCACGCACAGCAAGTGCGACTCTCGCTCAACACCGTC
GCTCGCTTCGACTCTTCCTCCTCCTCCTTTGATATCCCTCCCCAAGACCAGCTCTCCATCTCTATCGCTCTCTGC
TCACCCTCCACCCCTCCCCGCGTCATTATCTCGACTGATGATCTAGACGTGCACGAGGTCATTCTAAAAGACGGT
TTCGGTCTCTTTACCGGATCTTTTGAGAAGGGAGGGGTCATCGCACTCGATGGCCTATCCCCAGGGGCTTCTTTC
GAACTTGGCCTCTCCACCAACGGCCCCCTGCACGAGATAGTATCCCGCGATCCCCTCTTTGGCGACTCTACGAAC
AATCAAGCCATCCTCTTTTCCCACCCCTTCGCCTTTCCTCCACCCACTCCCCCTCCCCAATTTCCCAATTACACT
TTACCAGCAGCAAATGCTACACTACCAGACCCTCCTTCTTCACTCCCAAACCTCACTCTTATCGTTTCACAAACA
TCCAACACTCCCCTACTCCGCACATCCTGTTTTCTAAACTCTTCGGCCGTCAAAGCCGAGGGAAAAATCATCAAC
AGCTCATCGTGGTTACGGAGTCCAGAAGACGGTTGGAGGATTGAATATCTATTGGCTGGATTAGAACCTCAAACC
AATTATACCGCTTTTATAATTCAAGATGACTATAAAGTGTCTGGTCCAATTTACTTTTTCACCAAATCGACTTCA
TTTCAATGTACACTCGTGCATTCTCTACCTTATTGCCCAGCAACATCGTATTCCATTCCCCTCTCCCCTCCCAGC
ACTTCCATCGGCCAATTTCCAATATACGATACCACGTCGTTACCTCGACAACTTCAAGATACCTTTATACGCACT
TTACAAAATTTTACGGTGGCTCTTTCGACGTTTGCGTGTGGAAGAGATTTTTATTCTCCGGTTGTGGGATGTGAA
GAATGTCAAAAGGAATATCGGAAATGGCTTTGTACGGTTGTGTTTCCTAGGTGTACGGAACCTAGTCCTGGGAAT
CCTGATTTTGTGGTTTGGGATTCGAGTTTGAATGGGGTTGTGAATGCTCAACTTCCTGGATCTCAAACTGTCGTA
TCCGCTTTGTTACCTATGCCTTCCTCATCAACGCAGACACCGTTTATGAATCAAGCATATATGAAATTGTTACCC
TGTATAGAAACATGTACGTCTGTCGATCGAGCATGTCCACCCTTTCTTCAATTTAGATGTCCGAATTCGATGTTT
AATGGGGCGGCGAGTTATGGGTTTGGGTATATGGATGGTGGGGGGTTGGATGGGAGGTGGGGGGGTGGGGTTGTG
GATAGTGCGCAGGATGGGTGGGGGAATGTGTGGTGTAATGCGGGGTAA
Gene >Agabi119p4|026650
ATGCTCCTGCTCTGTCTGCTGTCTCTCCTCCTCGCCACGCACGCACAGCAAGTGCGACTCTCGCTCAACACCGTC
GCTCGCTTCGACTCTTCCTCCTCCTCCTTTGATATCCCTCCCCAAGACCAGCTCTCCATCTCTATCGCTCTCTGC
TCACCCTCCACCCCTCCCCGCGTCATTATCTCGACTGATGATCTAGACGTGCACGAGGTCATTCTAAAAGACGGT
TTCGGTCTCTTTACCGGATCTTTTGAGAAGGGAGGGGTCATCGCACTCGATGGCCTATCCCCAGGGGCTTCTTTC
GAACTTGGCCTCTCCACCAACGGTGCGTTACCCACACTTCCCATTATACCTCTGCTTATCTCTCTCTATCAGGCC
CCCTGCACGAGATAGTATCCCGCGATCCCCTCTTTGGCGACTCTACGAACAATCAAGCCATCCTCTTTTCCCACC
CCTTCGCCTTTCCTCCACCCACTCCCCCTCCCCAATTTCCCAATTACACTTTACCAGCAGCAAATGCTACACTAC
CAGACCCTCCTTCTTCACTCCCAAACCTCACTCTTATCGTTTCACAAACATCCAACACTCCCCTACTCCGCACAT
CCTGTTTTCTAAACTCTTCGGCCGTCAAAGCCGAGGGAAAAATCATCAACAGCTCATCGTGGTTACGGAGTCCAG
AAGACGGTTGGAGGATTGAATATCTATTGGCTGGATTAGAACCTCAAACCAATTATACCGCTTTTATAATTCAAG
ATGACTATAAAGTGTCTGGTCCAATTTACTTTTTCACCAAATCGACTTCATTTCAATGTACACTCGTGCATTCTC
TACCTTATTGCCCAGCAACATCGTATTCCATTCCCCTCTCCCCTCCCAGCACTTCCATCGGCCAATTTCCAATAT
ACGATACCACGTCGTTACCTCGACAACTTCAAGATACCTTTATACGCACTTTACAAAATTTTACGGTGGCTCTTT
CGACGTTTGCGTGTGGAAGAGATTTTTATTCTCCGGTTGTGGGATGTGAAGAATGTCAAAAGGAATATCGGAAAT
GGCTTTGTACGGTTGTGTTTCCTAGGTGTACGGAACCTAGTCCTGGGAATCCTGATTTTGTGGTTTGGGATTCGA
GTTTGAATGGGGTTGTGAATGCTCAACTTCCTGGATCTCAAACTGTCGTATCCGCTTTGTTACCTATGCCTTCCT
CATCAACGCAGACACCGTTTATGAATCAAGCATATATGAAATTGTTACCCTGTATAGAAACATGTACGTCTGTCG
ATCGAGCATGTCCACCCTTTCTTCAATTTAGATGTCCGAATTCGATGTTTAATGGGGCGGCGAGTTATGGGTTTG
GGTATATGGATGGTGGGGGGTTGGATGGGAGGTGGGGGGGTGGGGTTGTGGATAGTGCGCAGGATGGGTGGGGGA
ATGTGTGGTGTAATGCGGGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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