Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|024730
Gene name
Locationscaffold_11:896128..896714
Strand+
Gene length (bp)586
Transcript length (bp)375
Coding sequence length (bp)375
Protein length (aa) 125

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01185 Hydrophobin Fungal hydrophobin 6.9E-24 43 120

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P16933|SC3_SCHCO Fruiting body protein SC3 OS=Schizophyllum commune GN=SC3 PE=1 SV=2 43 122 7.0E-22
sp|O13300|HYP3_AGABI Hydrophobin-3 OS=Agaricus bisporus GN=abh3 PE=3 SV=1 9 124 4.0E-21
sp|P04158|SC1_SCHCO Fruiting body protein SC1 OS=Schizophyllum commune GN=SC1 PE=2 SV=2 40 124 1.0E-17
sp|O43122|HYP4_AGABI Hydrophobin-B OS=Agaricus bisporus GN=hypB PE=3 SV=1 43 120 3.0E-14
sp|P52748|HYP1_PISTI Hydrophobin-1 OS=Pisolithus tinctorius GN=HYD-1 PE=2 SV=1 33 120 2.0E-12
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Swissprot ID Swissprot Description Start End E-value
sp|P16933|SC3_SCHCO Fruiting body protein SC3 OS=Schizophyllum commune GN=SC3 PE=1 SV=2 43 122 7.0E-22
sp|O13300|HYP3_AGABI Hydrophobin-3 OS=Agaricus bisporus GN=abh3 PE=3 SV=1 9 124 4.0E-21
sp|P04158|SC1_SCHCO Fruiting body protein SC1 OS=Schizophyllum commune GN=SC1 PE=2 SV=2 40 124 1.0E-17
sp|O43122|HYP4_AGABI Hydrophobin-B OS=Agaricus bisporus GN=hypB PE=3 SV=1 43 120 3.0E-14
sp|P52748|HYP1_PISTI Hydrophobin-1 OS=Pisolithus tinctorius GN=HYD-1 PE=2 SV=1 33 120 2.0E-12
sp|O74300|SC6_SCHCO Hydrophobin-6 OS=Schizophyllum commune GN=SC6 PE=3 SV=1 33 117 1.0E-11
sp|P52749|HYP2_PISTI Hydrophobin-2 (Fragment) OS=Pisolithus tinctorius GN=HYD-2 PE=2 SV=1 29 123 2.0E-11
sp|P49072|HYP1_AGABI Hydrophobin-1 OS=Agaricus bisporus GN=hypA PE=2 SV=1 9 124 2.0E-10
sp|P49073|HYP2_AGABI Hydrophobin-2 OS=Agaricus bisporus GN=hypC PE=3 SV=2 43 124 2.0E-10
sp|P16934|SC4_SCHCO Fruiting body protein SC4 OS=Schizophyllum commune GN=SC4 PE=2 SV=1 40 120 8.0E-06
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GO

GO Term Description Terminal node
GO:0005199 structural constituent of cell wall Yes
GO:0009277 fungal-type cell wall Yes
GO:0005198 structural molecule activity No
GO:0030312 external encapsulating structure No
GO:0005618 cell wall No
GO:0110165 cellular anatomical entity No
GO:0003674 molecular_function No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|024730
MLVSIPRAIFNLVLLLTFAVCASAITTVPVNARRSDPLPADLCPAGNLQCCNALERADDSAVGVLLGLLGIVLQG
VEALVGITCSPIDILGIGQNECHTQAVCCENNDFHGIVAIGCVPIIISL*
Coding >Agabi119p4|024730
ATGTTGGTCTCTATTCCTCGCGCTATTTTCAATCTCGTCCTTCTCCTCACATTTGCTGTGTGTGCATCCGCGATT
ACAACCGTCCCAGTCAACGCCCGACGTTCGGATCCTCTTCCGGCGGACCTGTGCCCAGCAGGTAACCTTCAATGT
TGCAACGCCCTTGAGAGGGCAGACGACAGTGCTGTGGGAGTGCTCCTGGGTCTTCTTGGCATAGTGCTCCAGGGC
GTAGAAGCTCTCGTAGGCATAACTTGCTCGCCAATCGATATCTTAGGGATCGGTCAAAATGAGTGCCACACCCAA
GCGGTATGCTGCGAAAATAATGACTTCCATGGCATCGTTGCAATCGGTTGCGTTCCGATCATTATCAGCCTGTAA
Transcript >Agabi119p4|024730
ATGTTGGTCTCTATTCCTCGCGCTATTTTCAATCTCGTCCTTCTCCTCACATTTGCTGTGTGTGCATCCGCGATT
ACAACCGTCCCAGTCAACGCCCGACGTTCGGATCCTCTTCCGGCGGACCTGTGCCCAGCAGGTAACCTTCAATGT
TGCAACGCCCTTGAGAGGGCAGACGACAGTGCTGTGGGAGTGCTCCTGGGTCTTCTTGGCATAGTGCTCCAGGGC
GTAGAAGCTCTCGTAGGCATAACTTGCTCGCCAATCGATATCTTAGGGATCGGTCAAAATGAGTGCCACACCCAA
GCGGTATGCTGCGAAAATAATGACTTCCATGGCATCGTTGCAATCGGTTGCGTTCCGATCATTATCAGCCTGTAA
Gene >Agabi119p4|024730
ATGTTGGTCTCTATTCCTCGCGCTATTTTCAATCTCGTCCTTCTCCTCACATTTGCTGTGTGTGCATCCGCGATT
ACAACCGTCCCAGTCAACGCCCGAGTATGTAACGATTCACATCCGTTTGCGCAACTAATGAATTTCTATAAGCGT
TCGGATCCTCTTCCGGCGGACCTGTGCCCAGCAGGTAACCTTCAATGTTGCAACGCCCTTGAGAGGGTATGTAAT
CGATTCATCTGTTGTCCTGAGCGTAGACTCATGTGAAATGTGTTCAGGCAGACGACAGTGCTGTGGGAGTGCTCC
TGGGTCTTCTTGGCATAGTGCTCCAGGGCGTAGAAGCTCTCGTGTAAGGCCAATGCAGTTCCTGGGTTGCCGATG
AGCTAAAAAAAATTCACCATCAGAGGCATAACTTGCTCGCCAATCGATATCTTAGGGATCGGTCAAAATGAGTGC
CACACCCAAGCGGTATGCTGCGAAAATAATGACTTCGTGAGTGAGCAAGGTCAGGTTCGGTCTAGCTATATTGAC
TTGCTTTTTGCAGCATGGCATCGTTGCAATCGGTTGCGTTCCGATCATTATCAGCCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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