Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|024510
Gene name
Locationscaffold_11:851992..852789
Strand+
Gene length (bp)797
Transcript length (bp)561
Coding sequence length (bp)561
Protein length (aa) 187

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01753 zf-MYND MYND finger 1.8E-08 143 179

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|024510
MTVYNLDIKDKKLFPNFTQLPYDNDYDVTFYKEDAESGILRPRHHWCFLVEITEIVPWLRPMYYAKDIDGQSVFI
AFHTDDRSPHIARECKVGDTMAIMYAQSHGFMDGKIGIRVESHDYVKLFHCSLEKVLNVGEALISKSCHVCDKPA
RSQCVNCAMKYCSKECQTADWKLRHKEECNIIGRTP*
Coding >Agabi119p4|024510
ATGACTGTCTACAACCTTGACATCAAAGACAAGAAATTGTTCCCAAACTTTACACAGCTACCTTACGATAATGAC
TACGATGTCACTTTTTACAAGGAAGACGCAGAATCAGGAATCTTACGTCCTCGCCACCATTGGTGTTTCCTTGTA
GAAATCACCGAAATCGTGCCATGGCTTCGTCCAATGTATTATGCCAAGGATATCGATGGGCAGAGTGTGTTTATC
GCTTTTCATACAGATGACCGTTCCCCGCATATTGCCCGTGAATGCAAAGTGGGAGATACTATGGCGATTATGTAT
GCCCAAAGCCATGGGTTTATGGATGGAAAGATAGGCATTCGAGTTGAATCGCATGATTATGTCAAGTTGTTCCAT
TGTAGTCTCGAGAAGGTTCTTAATGTCGGCGAGGCATTGATCTCAAAATCGTGTCATGTCTGTGACAAACCAGCG
AGATCCCAATGCGTGAACTGCGCAATGAAATATTGCAGCAAAGAATGCCAAACTGCTGACTGGAAACTTAGGCAT
AAAGAGGAATGTAACATAATAGGAAGGACGCCGTGA
Transcript >Agabi119p4|024510
ATGACTGTCTACAACCTTGACATCAAAGACAAGAAATTGTTCCCAAACTTTACACAGCTACCTTACGATAATGAC
TACGATGTCACTTTTTACAAGGAAGACGCAGAATCAGGAATCTTACGTCCTCGCCACCATTGGTGTTTCCTTGTA
GAAATCACCGAAATCGTGCCATGGCTTCGTCCAATGTATTATGCCAAGGATATCGATGGGCAGAGTGTGTTTATC
GCTTTTCATACAGATGACCGTTCCCCGCATATTGCCCGTGAATGCAAAGTGGGAGATACTATGGCGATTATGTAT
GCCCAAAGCCATGGGTTTATGGATGGAAAGATAGGCATTCGAGTTGAATCGCATGATTATGTCAAGTTGTTCCAT
TGTAGTCTCGAGAAGGTTCTTAATGTCGGCGAGGCATTGATCTCAAAATCGTGTCATGTCTGTGACAAACCAGCG
AGATCCCAATGCGTGAACTGCGCAATGAAATATTGCAGCAAAGAATGCCAAACTGCTGACTGGAAACTTAGGCAT
AAAGAGGAATGTAACATAATAGGAAGGACGCCGTGA
Gene >Agabi119p4|024510
ATGACTGTCTACAACCTTGACATCAAAGACAAGGTATAGACATTCATTCTCATGCATACTCTCTCTTAATATCTC
CCTGCTACTCAGAAATTGTTCCCAAACTTTACACAGCTACCTTACGATAATGACTACGATGTCACTTTTTACAAG
GAAGACGCAGAATCAGGAATCTTACGTCCTCGCCACCATTGGTGTTTCCTTGTAGAAATCACCGAAATCGTGCCA
TGGCTTCGTCCAATGTATTATGCCAAGGATATCGATGGGCAGAGTGTGTTTATCGCTTTTCATACAGATGACCGT
TCCCCGCATATTGCCCGTGAATGCAAAGTGGGAGATACTATGGCGATTATGTATGCCCAAAGCCATGGGTTTATG
GATGGAAAGATAGGCATTCGAGTTGAATCGCATGATTATGTCAAGGTGGGTTTTAATTTAAAATATTATCGTGTA
GAAGGTGACTTCTCTGTTTTTTTCTTCCTTTTCTTTTTTTAGTTGTTCCATTGTAGTCTCGAGAAGGTTCTTAAT
GTCGGCGAGGCATTGATCTCAAAATCGTGTCATGTCTGTGACAAACCAGCGAGATCCCAATGCGTGAACTGCGCA
ATGAAATATTGCAGCAAAGTATAGTATCCTATTGTTCCCACTACGCATCGTCCATCACTGAACTTCATTTGATTT
AGGAATGCCAAACTGCTGACTGGAAACTTAGGCATAAAGAGGAATGTAACATAATAGGAAGGTGCTTCCTAAGGT
GGAGATGTTTTGATTGGTGGAAATTTGAATTCTTTAGGACGCCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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