Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|024470
Gene name
Locationscaffold_11:843316..845154
Strand+
Gene length (bp)1838
Transcript length (bp)978
Coding sequence length (bp)978
Protein length (aa) 326

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02182 SAD_SRA SAD/SRA domain 2.7E-48 49 198
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 3.2E-11 247 307
PF00240 ubiquitin Ubiquitin family 6.3E-07 246 309

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1 SV=1 47 194 8.0E-23
sp|Q7TPK1|UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus GN=Uhrf1 PE=1 SV=2 47 194 2.0E-22
sp|A7E320|UHRF1_BOVIN E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1 47 194 3.0E-22
sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1 SV=2 47 194 4.0E-22
sp|E7EZF3|UHRF1_DANRE E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio GN=uhrf1 PE=1 SV=1 47 194 4.0E-22
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Swissprot ID Swissprot Description Start End E-value
sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1 SV=1 47 194 8.0E-23
sp|Q7TPK1|UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus GN=Uhrf1 PE=1 SV=2 47 194 2.0E-22
sp|A7E320|UHRF1_BOVIN E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1 47 194 3.0E-22
sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1 SV=2 47 194 4.0E-22
sp|E7EZF3|UHRF1_DANRE E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio GN=uhrf1 PE=1 SV=1 47 194 4.0E-22
sp|B6CHA3|UHRF1_XENLA E3 ubiquitin-protein ligase UHRF1 OS=Xenopus laevis GN=uhrf1 PE=2 SV=1 47 194 6.0E-22
sp|F6UA42|UHRF1_XENTR E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis GN=uhrf1 PE=3 SV=2 47 194 2.0E-21
sp|Q7TMI3|UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus GN=Uhrf2 PE=1 SV=1 47 194 2.0E-18
sp|Q680I0|ORTH5_ARATH E3 ubiquitin-protein ligase ORTHRUS 5 OS=Arabidopsis thaliana GN=ORTH5 PE=2 SV=1 58 194 5.0E-18
sp|Q9C8E1|ORTH4_ARATH Putative E3 ubiquitin-protein ligase ORTHRUS 4 OS=Arabidopsis thaliana GN=ORTH4 PE=3 SV=1 58 194 6.0E-18
sp|Q8VYZ0|ORTH2_ARATH E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana GN=ORTH2 PE=1 SV=1 58 194 1.0E-17
sp|Q96PU4|UHRF2_HUMAN E3 ubiquitin-protein ligase UHRF2 OS=Homo sapiens GN=UHRF2 PE=1 SV=1 47 194 1.0E-17
sp|Q9FKA7|ORTH1_ARATH E3 ubiquitin-protein ligase ORTHRUS 1 OS=Arabidopsis thaliana GN=ORTH1 PE=1 SV=1 58 194 3.0E-17
sp|Q9T0G7|SUVH9_ARATH Histone-lysine N-methyltransferase family member SUVH9 OS=Arabidopsis thaliana GN=SUVH9 PE=1 SV=1 58 239 6.0E-16
sp|Q9FVS2|ORTH3_ARATH E3 ubiquitin-protein ligase ORTHRUS 3 OS=Arabidopsis thaliana GN=ORTH3 PE=3 SV=2 58 194 2.0E-14
sp|Q8GZB6|SUVH4_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2 89 201 9.0E-14
sp|Q5QD03|SUVH3_CHLRE Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Chlamydomonas reinhardtii GN=SUVH3 PE=2 SV=1 50 197 1.0E-13
sp|Q681I0|ORTHL_ARATH E3 ubiquitin-protein ligase ORTHRUS-LIKE 1 OS=Arabidopsis thaliana GN=ORTHL PE=2 SV=1 58 194 3.0E-13
sp|O82175|SUVH5_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 OS=Arabidopsis thaliana GN=SUVH5 PE=1 SV=1 58 204 4.0E-13
sp|O22781|SUVH2_ARATH Histone-lysine N-methyltransferase family member SUVH2 OS=Arabidopsis thaliana GN=SUVH2 PE=1 SV=1 58 198 4.0E-13
sp|O13351|PMT3_SCHPO Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmt3 PE=1 SV=2 215 315 7.0E-13
sp|Q9FF80|SUVH1_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Arabidopsis thaliana GN=SUVH1 PE=2 SV=1 58 211 1.0E-11
sp|Q9C5P4|SUVH3_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Arabidopsis thaliana GN=SUVH3 PE=2 SV=2 58 213 1.0E-11
sp|Q12306|SMT3_YEAST Ubiquitin-like protein SMT3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMT3 PE=1 SV=1 235 315 2.0E-11
sp|Q8VZ17|SUVH6_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 OS=Arabidopsis thaliana GN=SUVH6 PE=2 SV=2 89 293 1.0E-09
sp|Q9FHI0|YDG1_ARATH YDG domain-containing protein At5g47150 OS=Arabidopsis thaliana GN=At5g47150 PE=2 SV=1 58 201 2.0E-08
sp|Q93YF5|SUVH1_TOBAC Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Nicotiana tabacum GN=SUVH1 PE=1 SV=1 1 211 3.0E-08
sp|Q9FLP6|SUMO2_ARATH Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana GN=SUMO2 PE=1 SV=1 229 314 4.0E-08
sp|Q9C5P0|SUVH8_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH8 OS=Arabidopsis thaliana GN=SUVH8 PE=3 SV=1 58 200 4.0E-08
sp|P55857|SUMO1_ORYSJ Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica GN=SUMO1 PE=1 SV=1 234 316 5.0E-08
sp|Q9C5P1|SUVH7_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 OS=Arabidopsis thaliana GN=SUVH7 PE=2 SV=1 88 200 3.0E-07
sp|Q3E8A8|SUMO7_ARATH Putative small ubiquitin-related modifier 7 OS=Arabidopsis thaliana GN=SUMO7 PE=1 SV=2 238 318 8.0E-07
sp|P55852|SUMO1_ARATH Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana GN=SUMO1 PE=1 SV=2 230 312 9.0E-07
sp|P55854|SUMO3_HUMAN Small ubiquitin-related modifier 3 OS=Homo sapiens GN=SUMO3 PE=1 SV=2 240 322 1.0E-06
sp|Q3EC60|SUVHA_ARATH Putative inactive histone-lysine N-methyltransferase family member SUVH10 OS=Arabidopsis thaliana GN=SUVH10 PE=3 SV=1 89 240 1.0E-06
sp|Q7ZTK7|SMO2A_XENLA Small ubiquitin-related modifier 2-A OS=Xenopus laevis GN=sumo2-a PE=3 SV=1 240 316 4.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 66 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|024470
MAMERLRRQIMQNDQSGTYRFNDDTGSATQIASPKGGDFLSSEASAADHYGHPDKCPVGRIFESRKACYDAKVHR
APMKGILGTVSEGAYSIVMNDGYEDDVDEGDVVYYTGAGGQDNFGSSVQIKDQSFDHLDNRTLQRNIVTKHPVRV
IRGSKNTKYGPFRGYRYDGLYDVVHANYAKGKRGYQICRFKLQRRPGQLPLKDLPHAVITWNKRNVHSINWALHF
PLTMSQEPEDVKPKLNLTVLYEGESITVKVRPTMQFSKIFQAAEKRFQKEPGTFRFTYDGQRVNANDTPGDLNME
EGDQIDAHLGQVGGCFEHSFSGLAV*
Coding >Agabi119p4|024470
ATGGCCATGGAAAGACTCCGCCGGCAAATTATGCAGAATGACCAAAGCGGTACTTATCGCTTCAACGATGATACC
GGCAGCGCTACCCAAATCGCGTCCCCGAAGGGTGGGGACTTCCTCTCGAGTGAGGCATCAGCAGCGGATCATTAT
GGGCATCCGGATAAATGTCCTGTCGGTCGCATCTTTGAAAGTCGGAAGGCTTGTTATGATGCGAAAGTTCATCGA
GCGCCCATGAAAGGTATTCTCGGCACTGTCAGCGAGGGTGCTTATTCGATAGTGATGAATGATGGGTATGAGGAT
GATGTTGACGAGGGCGACGTGGTCTATTACACTGGAGCCGGAGGACAGGATAACTTTGGCAGTTCGGTACAAATC
AAGGATCAAAGCTTTGATCACCTTGATAATCGCACTCTTCAGAGGAATATCGTTACGAAGCATCCTGTGAGAGTC
ATCCGTGGAAGCAAGAATACCAAATATGGGCCTTTCAGAGGATACCGTTATGATGGTTTATATGATGTAGTCCAC
GCAAACTATGCTAAGGGAAAACGCGGTTACCAAATTTGTAGATTCAAGCTGCAAAGACGTCCTGGACAACTGCCT
TTGAAAGATTTGCCGCACGCGGTTATCACGTGGAATAAGCGTAACGTTCACAGCATAAACTGGGCATTACACTTT
CCTTTGACCATGTCACAAGAGCCCGAGGACGTGAAGCCAAAGCTTAATTTGACTGTCCTTTACGAGGGAGAATCG
ATCACTGTCAAAGTGAGACCTACAATGCAATTTTCCAAGATTTTTCAAGCGGCAGAGAAACGGTTTCAAAAGGAA
CCCGGCACCTTCCGATTCACATACGATGGGCAACGAGTAAATGCGAATGATACACCAGGAGACTTAAACATGGAA
GAGGGTGATCAGATTGATGCTCATTTGGGGCAGGTGGGCGGTTGTTTTGAACATTCCTTTTCGGGTCTTGCTGTT
TGA
Transcript >Agabi119p4|024470
ATGGCCATGGAAAGACTCCGCCGGCAAATTATGCAGAATGACCAAAGCGGTACTTATCGCTTCAACGATGATACC
GGCAGCGCTACCCAAATCGCGTCCCCGAAGGGTGGGGACTTCCTCTCGAGTGAGGCATCAGCAGCGGATCATTAT
GGGCATCCGGATAAATGTCCTGTCGGTCGCATCTTTGAAAGTCGGAAGGCTTGTTATGATGCGAAAGTTCATCGA
GCGCCCATGAAAGGTATTCTCGGCACTGTCAGCGAGGGTGCTTATTCGATAGTGATGAATGATGGGTATGAGGAT
GATGTTGACGAGGGCGACGTGGTCTATTACACTGGAGCCGGAGGACAGGATAACTTTGGCAGTTCGGTACAAATC
AAGGATCAAAGCTTTGATCACCTTGATAATCGCACTCTTCAGAGGAATATCGTTACGAAGCATCCTGTGAGAGTC
ATCCGTGGAAGCAAGAATACCAAATATGGGCCTTTCAGAGGATACCGTTATGATGGTTTATATGATGTAGTCCAC
GCAAACTATGCTAAGGGAAAACGCGGTTACCAAATTTGTAGATTCAAGCTGCAAAGACGTCCTGGACAACTGCCT
TTGAAAGATTTGCCGCACGCGGTTATCACGTGGAATAAGCGTAACGTTCACAGCATAAACTGGGCATTACACTTT
CCTTTGACCATGTCACAAGAGCCCGAGGACGTGAAGCCAAAGCTTAATTTGACTGTCCTTTACGAGGGAGAATCG
ATCACTGTCAAAGTGAGACCTACAATGCAATTTTCCAAGATTTTTCAAGCGGCAGAGAAACGGTTTCAAAAGGAA
CCCGGCACCTTCCGATTCACATACGATGGGCAACGAGTAAATGCGAATGATACACCAGGAGACTTAAACATGGAA
GAGGGTGATCAGATTGATGCTCATTTGGGGCAGGTGGGCGGTTGTTTTGAACATTCCTTTTCGGGTCTTGCTGTT
TGA
Gene >Agabi119p4|024470
ATGGCCATGGAAAGACTGTTAGTCCCCGTTCTCTCAATTTTAAGCCGCTCATTGACAATTTCTTTGCAGCCGCCG
GCAAATTATGCAGAATGACCAAAGCGGTACTTATCGCTTCAACGATGATACCGGCAGCGCTACCCAAATCGCGTC
CCCGAAGGGTGGGGACTTCCTCTCGAGTGAGGCATCAGCAGCGGATCATTATGGGCATCCGGATAAATGTCCTGT
CGGTCGCATCTTTGAAAGTCGGTGCGTTGACTCGCCTCAACCAGACTGTGGGCATCATCTTATGAGGCCTTTTGT
TGCTCTTTCATGTAGGAAGGCTTGTTATGATGCGAAAGTTCATCGAGCGCCCATGAAAGGTATTCTCGGCACTGT
CAGCGAGGGTGCTTATTCGATAGTGATGAATGATGGGTATGAGGATGATGTTGACGAGGGCGACGTGGTGTGGGT
CGTACGCTCTTCAATCTCAGTAAATCTGTGTCTCACCCTACAAAAACAGCTATTACACTGGAGCCGGAGGACAGG
ATAACTTTGGCAGTGTACGTCCTTAGCACTATCCTTCTTGGCCTTAAAAGTATCACTGACTCCATCATTTTTAAC
AGTCGGTACAAATCAAGGATCAAAGCTTTGATCACCTTGATAATCGCACTCTTCAGGTAGGTGGTTTCCGTGGAG
CACAAGCTCACCCTAACTCTGAGCGTAAAGAGGAATATCGTTACGAAGCATCCTGTGAGAGTCATCCGTGGAAGC
AAGAATACCAAATATGGGCCTTTCAGAGGGTGAGCCTCGTCGACGTTTATGATACTTTTCTCTGACTATGACGCA
TTGCTTCGTTAGATACCGTTATGATGGTTTATATGATGTAGTCCACGCAAGTACTTTGTCTATTGGAATAAGTTA
CCCAACTGATTCATATGTGCACAGGCAGACTATGCTAAGGGAAAACGCGGTTACCAAATTTGTAGATTCAAGCTG
CAAGTGAGATCCCATCCTTTTCTTTTCAATCGAAGAAGGTATTAACTACTAATGCAGAGACGTCCTGGACAACTG
CCTTTGAAAGATTTGCCGCGTATGTAACACTCTGCTTGATACCATAATGCTTCAGCTTTGTATTTTTATAAACCA
TATTGGGCTATGTTATTGCTTTTTGTCGCGGTGTGACTGAAGACGCGGTTATCACGTGGAATAAGCGTAACGTTC
ACAGCATAAACTGGGCATTACACTTTCCTTTGACCATGTCACAAGAGCCCGAGGACGTGAAGCCAAAGCTTAATT
TGACTGTCCTTTACGAGGGAGAATGTGCGTTATCTGTCGTGCCGGAATCGATGCTCCATCGTGATTTTCTTTCGC
AGCGATCACTGTCAAAGTGAGACCTACAATGCAATTTTCCAAGATTTTTCAAGCGGCAGAGGTGTGTGCGTTTAA
CCTCCTAATGCCTTGGAAGCTATTTTGATTTTGTTTATAGAAACGGTTTCAAAAGGAACCCGGTGCGTCCTCACT
TCCACAAAGTTGGATCCATCGACCTAATCAATCATGTCCAATACCCCGTCTTGTGAACGGGCATAACGCTGCAAA
TAGGCACCTTCCGATTCACATACGATGGGCAACGAGTAAATGCGAATGATACACCAGGAGACGTTAGTTCCTCTT
TTCTTCGCGCATCAATTTTTTTTGAATGCGGTTTATTTCAGTTAAACATGGAAGAGGGTGATCAGATTGATGCTC
ATTTGGGGCAGGTACGCCTCTTTCTTATTTCCCCCTCTCTCACATGTACTCATGCACTCTCATGTTAGGTGGGCG
GTTGTTTTGAACATTCCTTTTCGGGTCTTGCTGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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