Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|024140
Gene name
Locationscaffold_11:740637..741029
Strand+
Gene length (bp)392
Transcript length (bp)339
Coding sequence length (bp)339
Protein length (aa) 113

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01328 Peroxidase_2 Peroxidase, family 2 1.0E-16 67 111

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|B9W4V6|APO1_AGRAE Aromatic peroxygenase OS=Agrocybe aegerita GN=APO1 PE=1 SV=1 4 112 1.0E-32
sp|B9W4V8|APO1_COPRA Aromatic peroxygenase (Fragments) OS=Coprinellus radians GN=APO PE=1 SV=2 49 111 1.0E-18

GO

GO Term Description Terminal node
GO:0004601 peroxidase activity Yes
GO:0016491 oxidoreductase activity No
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor No
GO:0016209 antioxidant activity No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|024140
MFDLVYFTILVLALAAPTIAFPAHASLAGLSREEMDKALATLKFTPPPPPPGPLDFSGTKLVNDAKHPFMDARPS
DIRGPCPGLNTLASHGYISRTGITSCSEIITAVMEGV*
Coding >Agabi119p4|024140
ATGTTCGATCTTGTATACTTCACCATTCTTGTCCTGGCTTTAGCTGCTCCCACTATCGCCTTTCCGGCACATGCT
TCTTTGGCTGGGTTGTCAAGAGAAGAGATGGACAAAGCATTGGCCACGCTCAAATTCACCCCTCCGCCACCTCCT
CCTGGTCCGCTGGATTTCAGTGGCACCAAGCTTGTCAATGACGCCAAACATCCTTTCATGGATGCGAGACCAAGC
GACATTCGTGGACCATGCCCAGGTCTGAATACACTGGCTTCCCATGGGTATATAAGTCGCACTGGAATTACCAGT
TGTTCAGAGATCATCACTGCAGTGATGGAAGGTGTGTAA
Transcript >Agabi119p4|024140
ATGTTCGATCTTGTATACTTCACCATTCTTGTCCTGGCTTTAGCTGCTCCCACTATCGCCTTTCCGGCACATGCT
TCTTTGGCTGGGTTGTCAAGAGAAGAGATGGACAAAGCATTGGCCACGCTCAAATTCACCCCTCCGCCACCTCCT
CCTGGTCCGCTGGATTTCAGTGGCACCAAGCTTGTCAATGACGCCAAACATCCTTTCATGGATGCGAGACCAAGC
GACATTCGTGGACCATGCCCAGGTCTGAATACACTGGCTTCCCATGGGTATATAAGTCGCACTGGAATTACCAGT
TGTTCAGAGATCATCACTGCAGTGATGGAAGGTGTGTAA
Gene >Agabi119p4|024140
ATGTTCGATCTTGTATACTTCACCATTCTTGTCCTGGCTTTAGCTGCTCCCACTATCGCCTTTCCGGCACATGCT
TCTTTGGCTGGGTTGTCAAGAGAAGAGATGGACAAAGCATTGGCCACGCTCAAATTCACCCCTCCGCCACCTCCT
CCTGGTCCGCTGGATTTCAGTGGCACCAAGCTTGTCAATGACGCCAAACATCCTTTCATGGATGCGAGACCAAGC
GACATTCGTGGACCATGCCCAGGTCTGAATACACTGGCTTCCCATGGGGTTCGTATTGTTTTCAAGTTTGCTTCG
GGCTGCAATCTGACCGCTTTCTATAGTATATAAGTCGCACTGGAATTACCAGTTGTTCAGAGATCATCACTGCAG
TGATGGAAGGTGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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