Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|023890
Gene name
Location	scaffold_11:695137..696195
Strand	-
Gene length (bp)	1058
Transcript length (bp)	954
Coding sequence length (bp)	954
Protein length (aa)	318

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12146	Hydrolase_4	Serine aminopeptidase, S33	2.6E-12	37	270
PF12697	Abhydrolase_6	Alpha/beta hydrolase family	1.0E-11	39	281
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	7.0E-07	37	140

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P9WGS3\|EPHD_MYCTU	Probable oxidoreductase EphD OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ephD PE=1 SV=1	9	140	7.0E-07
sp\|P9WGS2\|EPHD_MYCTO	Probable oxidoreductase EphD OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=ephD PE=3 SV=1	9	140	7.0E-07
sp\|P66778\|EPHD_MYCBO	Probable oxidoreductase EphD OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ephD PE=3 SV=1	9	140	7.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 51	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|023890 MTTASQNPTKYDSRYVKSADGTEIYADACGNRSPNSPVLVLIHGAFMVKGAFDPIIEDPKWTSSVFFVRYDTRGH GRSGKSTAEEAWESKRFSEDFEAVCSEFNVREAYVLGWSIGSAQFVDIMSYNTTVRINGFISVAGAIYLDPSVAK RTARPLVFECAAALTAPSSTDVFQEGLLNFLHLCSDKLPTDLFRVLLEGMVLQPRAAAVWVHKRKQDPEKMLEAA RAGKLPLLAIGGGKDKFLDEDGFKATYEELGWQRMTYRHLEDADHVPWVSSPEEFRHVVLAWLRELQPGAEETVE GGFFPRLKNLLNWMMSR*
Coding	>Agabi119p4\|023890 ATGACCACCGCCTCGCAGAATCCTACAAAGTATGACTCTCGCTACGTCAAGTCAGCAGACGGCACAGAGATCTAT GCAGATGCATGCGGGAACCGTTCTCCGAATTCTCCAGTTCTCGTCTTGATTCACGGTGCTTTTATGGTCAAAGGC GCATTTGACCCCATCATTGAGGATCCCAAATGGACGTCTAGTGTATTCTTTGTGCGATACGATACACGTGGGCAC GGTAGAAGCGGCAAATCCACTGCGGAGGAAGCATGGGAATCCAAACGATTTTCAGAGGATTTCGAAGCTGTTTGC AGTGAATTCAATGTTAGAGAAGCATATGTGCTGGGATGGAGTATTGGTTCTGCTCAGTTCGTGGATATCATGAGC TATAATACCACGGTTCGGATAAATGGGTTCATCAGCGTCGCAGGAGCTATATACCTCGATCCTTCCGTTGCCAAA CGTACTGCCAGACCCTTGGTATTTGAATGCGCGGCGGCACTCACAGCTCCTTCTTCAACCGACGTCTTCCAAGAA GGTTTACTAAATTTCCTTCATTTATGTTCTGATAAACTTCCGACCGACCTCTTCCGCGTTTTACTGGAGGGAATG GTCCTTCAACCACGAGCAGCAGCTGTATGGGTGCACAAACGAAAACAAGACCCTGAGAAAATGCTGGAGGCGGCC CGAGCTGGGAAGCTGCCACTTTTGGCTATCGGTGGCGGAAAGGATAAATTCTTGGATGAGGATGGATTCAAGGCA ACATATGAAGAATTGGGATGGCAGAGGATGACCTACCGACATTTGGAAGACGCGGACCATGTTCCGTGGGTGTCT TCTCCAGAAGAATTCAGACATGTCGTATTAGCGTGGCTCAGGGAGTTGCAACCTGGTGCTGAAGAAACAGTGGAA GGTGGTTTTTTTCCTCGGCTAAAAAATCTCTTGAACTGGATGATGTCGCGTTAA
Transcript	>Agabi119p4\|023890 ATGACCACCGCCTCGCAGAATCCTACAAAGTATGACTCTCGCTACGTCAAGTCAGCAGACGGCACAGAGATCTAT GCAGATGCATGCGGGAACCGTTCTCCGAATTCTCCAGTTCTCGTCTTGATTCACGGTGCTTTTATGGTCAAAGGC GCATTTGACCCCATCATTGAGGATCCCAAATGGACGTCTAGTGTATTCTTTGTGCGATACGATACACGTGGGCAC GGTAGAAGCGGCAAATCCACTGCGGAGGAAGCATGGGAATCCAAACGATTTTCAGAGGATTTCGAAGCTGTTTGC AGTGAATTCAATGTTAGAGAAGCATATGTGCTGGGATGGAGTATTGGTTCTGCTCAGTTCGTGGATATCATGAGC TATAATACCACGGTTCGGATAAATGGGTTCATCAGCGTCGCAGGAGCTATATACCTCGATCCTTCCGTTGCCAAA CGTACTGCCAGACCCTTGGTATTTGAATGCGCGGCGGCACTCACAGCTCCTTCTTCAACCGACGTCTTCCAAGAA GGTTTACTAAATTTCCTTCATTTATGTTCTGATAAACTTCCGACCGACCTCTTCCGCGTTTTACTGGAGGGAATG GTCCTTCAACCACGAGCAGCAGCTGTATGGGTGCACAAACGAAAACAAGACCCTGAGAAAATGCTGGAGGCGGCC CGAGCTGGGAAGCTGCCACTTTTGGCTATCGGTGGCGGAAAGGATAAATTCTTGGATGAGGATGGATTCAAGGCA ACATATGAAGAATTGGGATGGCAGAGGATGACCTACCGACATTTGGAAGACGCGGACCATGTTCCGTGGGTGTCT TCTCCAGAAGAATTCAGACATGTCGTATTAGCGTGGCTCAGGGAGTTGCAACCTGGTGCTGAAGAAACAGTGGAA GGTGGTTTTTTTCCTCGGCTAAAAAATCTCTTGAACTGGATGATGTCGCGTTAA
Gene	>Agabi119p4\|023890 ATGACCACCGCCTCGCAGAATCCTACAAAGTATGACTCTCGCTACGTCAAGTCAGCAGACGGCACAGAGATCTAT GCAGATGCATGCGGGAACCGTTCTCCGAATTCTCCAGTTCTCGTCTTGATTCACGGTGCTTTTATGGTCAAAGGC GCATTTGACCCCATCATTGAGGATCCCAAATGGACGTCTAGTGTATTCTTTGTAAGCTTGACAGGGGTATAGCGG AAGCAAGGCTAAAACTTTCTTGATGATAGGTGCGATACGATACACGTGGGCACGGTAGAAGCGGCAAATCCACTG CGGAGGAAGCATGGGAATCCAAACGATTTTCAGAGGATTTCGAAGCTGTTTGCAGTGAATTCAATGTTAGAGAAG CATATGTGCTGGGATGGAGTATTGGTTGTGCGTCATTGTTCAATACCGCAAGATACTACAACGCTAATCGGACAC TAGCTGCTCAGTTCGTGGATATCATGAGCTATAATACCACGGTTCGGATAAATGGGTTCATCAGCGTCGCAGGAG CTATATACCTCGATCCTTCCGTTGCCAAACGTACTGCCAGACCCTTGGTATTTGAATGCGCGGCGGCACTCACAG CTCCTTCTTCAACCGACGTCTTCCAAGAAGGTTTACTAAATTTCCTTCATTTATGTTCTGATAAACTTCCGACCG ACCTCTTCCGCGTTTTACTGGAGGGAATGGTCCTTCAACCACGAGCAGCAGCTGTATGGGTGCACAAACGAAAAC AAGACCCTGAGAAAATGCTGGAGGCGGCCCGAGCTGGGAAGCTGCCACTTTTGGCTATCGGTGGCGGAAAGGATA AATTCTTGGATGAGGATGGATTCAAGGCAACATATGAAGAATTGGGATGGCAGAGGATGACCTACCGACATTTGG AAGACGCGGACCATGTTCCGTGGGTGTCTTCTCCAGAAGAATTCAGACATGTCGTATTAGCGTGGCTCAGGGAGT TGCAACCTGGTGCTGAAGAAACAGTGGAAGGTGGTTTTTTTCCTCGGCTAAAAAATCTCTTGAACTGGATGATGT CGCGTTAA

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