Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|023870
Gene name
Location	scaffold_11:689716..690696
Strand	+
Gene length (bp)	980
Transcript length (bp)	873
Coding sequence length (bp)	873
Protein length (aa)	291

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12697	Abhydrolase_6	Alpha/beta hydrolase family	4.0E-10	36	278
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	3.1E-07	34	115
PF12146	Hydrolase_4	Serine aminopeptidase, S33	7.0E-07	35	149

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P9WGS3\|EPHD_MYCTU	Probable oxidoreductase EphD OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ephD PE=1 SV=1	10	222	9.0E-06
sp\|P9WGS2\|EPHD_MYCTO	Probable oxidoreductase EphD OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=ephD PE=3 SV=1	10	222	9.0E-06
sp\|P66778\|EPHD_MYCBO	Probable oxidoreductase EphD OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ephD PE=3 SV=1	10	222	9.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 50	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|023870 MTRDLEVNTSRFVKSADGTEIYTDATGNRSPSSPALVLVHGIFMNKGVFNPIFDDSKWTSSLFLVRYDTRGHGRS GKSVAEEAWESKRFAEDFEAVCREFEVREAYVLGWSIGAAVLPDIMTYTTSVKILGFINVAGVVSVDPSIKRRSS RPLVREIGGTLLSPPSVDAFHEALFQFLHICSDELSPELFRILLEGMVMQPRGVAAWAFKRKQNPEKMLQEARGG RLPLLGISGLKDKSLIVEELKGELEDLGWKRMTYRYIQDADHIPWVSCAEEFREIVLTWIKELTP*
Coding	>Agabi119p4\|023870 ATGACCAGAGACTTGGAAGTGAATACCTCTCGCTTCGTGAAGTCAGCTGATGGTACGGAAATATATACAGACGCG ACGGGCAACCGCTCGCCAAGCTCCCCGGCCCTAGTTTTGGTCCATGGTATTTTCATGAACAAAGGCGTATTCAAT CCTATCTTTGACGATTCCAAATGGACCTCTAGTCTATTCCTAGTGCGGTACGATACCCGTGGACATGGTAGAAGC GGCAAATCGGTTGCTGAGGAAGCCTGGGAATCCAAACGGTTTGCGGAAGATTTTGAAGCTGTTTGCAGAGAGTTC GAAGTAAGAGAAGCATACGTGTTGGGATGGAGTATTGGTGCCGCTGTGCTCCCTGATATCATGACCTACACCACT TCAGTTAAGATACTTGGCTTCATTAATGTCGCAGGAGTTGTATCCGTGGACCCTTCGATTAAACGACGCTCATCT CGTCCACTGGTACGTGAAATCGGGGGTACACTCCTATCCCCTCCTTCCGTAGATGCCTTCCACGAAGCTTTATTT CAATTCCTCCACATATGCTCTGACGAGCTCTCTCCAGAGCTCTTCCGCATTTTACTGGAAGGAATGGTCATGCAG CCACGGGGAGTAGCAGCGTGGGCTTTTAAAAGAAAGCAGAATCCTGAGAAGATGTTGCAAGAGGCGCGAGGCGGG AGACTTCCACTCCTGGGCATCAGCGGCTTAAAGGATAAATCATTGATTGTCGAGGAATTGAAAGGAGAGTTGGAA GACTTGGGGTGGAAAAGGATGACGTATCGGTATATACAAGACGCGGACCACATTCCGTGGGTGTCTTGTGCAGAA GAGTTTAGAGAAATTGTCTTGACGTGGATAAAGGAGTTAACGCCATAA
Transcript	>Agabi119p4\|023870 ATGACCAGAGACTTGGAAGTGAATACCTCTCGCTTCGTGAAGTCAGCTGATGGTACGGAAATATATACAGACGCG ACGGGCAACCGCTCGCCAAGCTCCCCGGCCCTAGTTTTGGTCCATGGTATTTTCATGAACAAAGGCGTATTCAAT CCTATCTTTGACGATTCCAAATGGACCTCTAGTCTATTCCTAGTGCGGTACGATACCCGTGGACATGGTAGAAGC GGCAAATCGGTTGCTGAGGAAGCCTGGGAATCCAAACGGTTTGCGGAAGATTTTGAAGCTGTTTGCAGAGAGTTC GAAGTAAGAGAAGCATACGTGTTGGGATGGAGTATTGGTGCCGCTGTGCTCCCTGATATCATGACCTACACCACT TCAGTTAAGATACTTGGCTTCATTAATGTCGCAGGAGTTGTATCCGTGGACCCTTCGATTAAACGACGCTCATCT CGTCCACTGGTACGTGAAATCGGGGGTACACTCCTATCCCCTCCTTCCGTAGATGCCTTCCACGAAGCTTTATTT CAATTCCTCCACATATGCTCTGACGAGCTCTCTCCAGAGCTCTTCCGCATTTTACTGGAAGGAATGGTCATGCAG CCACGGGGAGTAGCAGCGTGGGCTTTTAAAAGAAAGCAGAATCCTGAGAAGATGTTGCAAGAGGCGCGAGGCGGG AGACTTCCACTCCTGGGCATCAGCGGCTTAAAGGATAAATCATTGATTGTCGAGGAATTGAAAGGAGAGTTGGAA GACTTGGGGTGGAAAAGGATGACGTATCGGTATATACAAGACGCGGACCACATTCCGTGGGTGTCTTGTGCAGAA GAGTTTAGAGAAATTGTCTTGACGTGGATAAAGGAGTTAACGCCATAA
Gene	>Agabi119p4\|023870 ATGACCAGAGACTTGGAAGTGAATACCTCTCGCTTCGTGAAGTCAGCTGATGGTACGGAAATATATACAGACGCG ACGGGCAACCGCTCGCCAAGCTCCCCGGCCCTAGTTTTGGTCCATGGTATTTTCATGAACAAAGGCGTATTCAAT CCTATCTTTGACGATTCCAAATGGACCTCTAGTCTATTCCTAGTAAGCCAAGTTAGTAGCATGGTGAGCGTGACT GAAGCTCATGATACTGAAGGTGCGGTACGATACCCGTGGACATGGTAGAAGCGGCAAATCGGTTGCTGAGGAAGC CTGGGAATCCAAACGGTTTGCGGAAGATTTTGAAGCTGTTTGCAGAGAGTTCGAAGTAAGAGAAGCATACGTGTT GGGATGGAGTATTGGTGGTGGGCCATTTTCTTTGCTCGATACCAATAGACTCGGCTCTGATGACTTTTTCAGCCG CTGTGCTCCCTGATATCATGACCTACACCACTTCAGTTAAGATACTTGGCTTCATTAATGTCGCAGGAGTTGTAT CCGTGGACCCTTCGATTAAACGACGCTCATCTCGTCCACTGGTACGTGAAATCGGGGGTACACTCCTATCCCCTC CTTCCGTAGATGCCTTCCACGAAGCTTTATTTCAATTCCTCCACATATGCTCTGACGAGCTCTCTCCAGAGCTCT TCCGCATTTTACTGGAAGGAATGGTCATGCAGCCACGGGGAGTAGCAGCGTGGGCTTTTAAAAGAAAGCAGAATC CTGAGAAGATGTTGCAAGAGGCGCGAGGCGGGAGACTTCCACTCCTGGGCATCAGCGGCTTAAAGGATAAATCAT TGATTGTCGAGGAATTGAAAGGAGAGTTGGAAGACTTGGGGTGGAAAAGGATGACGTATCGGTATATACAAGACG CGGACCACATTCCGTGGGTGTCTTGTGCAGAAGAGTTTAGAGAAATTGTCTTGACGTGGATAAAGGAGTTAACGC CATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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