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| Protein ID | Agabi119p4|023800 |
| Gene name | |
| Location | scaffold_11:681954..684101 |
| Strand | + |
| Gene length (bp) | 2147 |
| Transcript length (bp) | 1761 |
| Coding sequence length (bp) | 1761 |
| Protein length (aa) | 587 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04616 | Glyco_hydro_43 | Glycosyl hydrolases family 43 | 7.1E-71 | 24 | 324 |
| PF17851 | GH43_C2 | Beta xylosidase C-terminal Concanavalin A-like domain | 2.5E-25 | 372 | 581 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A7LXU0|GH43B_BACO1 | Non-reducing end alpha-L-arabinofuranosidase BoGH43B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153) GN=BACOVA_02656 PE=1 SV=2 | 1 | 580 | 2.0E-77 |
| sp|A7LXT8|GH43A_BACO1 | Non-reducing end alpha-L-arabinofuranosidase BoGH43A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153) GN=BACOVA_02654 PE=1 SV=1 | 1 | 581 | 6.0E-67 |
| sp|P94489|XYNB_BACSU | Beta-xylosidase OS=Bacillus subtilis (strain 168) GN=xynB PE=1 SV=2 | 25 | 581 | 7.0E-61 |
| sp|P07129|XYNB_BACPU | Beta-xylosidase OS=Bacillus pumilus GN=xynB PE=1 SV=2 | 25 | 452 | 2.0E-58 |
| sp|P45982|XYLB_BUTFI | Xylosidase/arabinosidase OS=Butyrivibrio fibrisolvens GN=xylB PE=3 SV=1 | 22 | 580 | 6.0E-56 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A7LXU0|GH43B_BACO1 | Non-reducing end alpha-L-arabinofuranosidase BoGH43B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153) GN=BACOVA_02656 PE=1 SV=2 | 1 | 580 | 2.0E-77 |
| sp|A7LXT8|GH43A_BACO1 | Non-reducing end alpha-L-arabinofuranosidase BoGH43A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153) GN=BACOVA_02654 PE=1 SV=1 | 1 | 581 | 6.0E-67 |
| sp|P94489|XYNB_BACSU | Beta-xylosidase OS=Bacillus subtilis (strain 168) GN=xynB PE=1 SV=2 | 25 | 581 | 7.0E-61 |
| sp|P07129|XYNB_BACPU | Beta-xylosidase OS=Bacillus pumilus GN=xynB PE=1 SV=2 | 25 | 452 | 2.0E-58 |
| sp|P45982|XYLB_BUTFI | Xylosidase/arabinosidase OS=Butyrivibrio fibrisolvens GN=xylB PE=3 SV=1 | 22 | 580 | 6.0E-56 |
| sp|A9ZND1|XLOA_VIBSX | Xylan 1,3-beta-xylosidase OS=Vibrio sp. GN=xloA PE=1 SV=1 | 24 | 468 | 3.0E-52 |
| sp|P77713|YAGH_ECOLI | Putative beta-xylosidase OS=Escherichia coli (strain K12) GN=yagH PE=3 SV=1 | 25 | 563 | 5.0E-50 |
| sp|Q9WXE8|XYLO_PRERU | Putative beta-xylosidase OS=Prevotella ruminicola PE=3 SV=2 | 24 | 326 | 6.0E-12 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0016787 | hydrolase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0008152 | metabolic process | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 18 | 0.999428 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GH43_13 | 3.3E-122 | 24 | 324 |
| Orthofinder run ID | 5 |
| Orthogroup | 2338 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Agaricus bisporus var bisporus H39 | AgabiH39|023800 |
| Agaricus bisporus var bisporus H97 | AgabiH97|023800 |
| Agaricus bisporus var burnettii H119p4 | Agabi119p4|023800 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|023800 MLLSLLSLALTVAASVLGVTHLQRNPILPGWNPDPTILRVGEDYFIATSTFEYFPGHPIYHSKNLVDWTHVGHGL NRPSQLALFGTPSDAGVWAPSLRYHDGTYYLTSTTRYVYTEELRLFPRSFYVTTKDIFSNNWSDPIYFDSLGYDG DLFWDTNGDVYLTWSGINNNEDKIYSIYQSKIDLETGTSLTPAEIIFNGTLPHDSAARPEGPHIYYINSTYYLLI AEGGTGITHRSTIQRSTTSPAGPWENNPNNPILYNGANTSLSVQNTGHADIVQAIDGSWWGVALGVRPQGAEDDD LRLSREQLGRETFLFPVTWVDGWPVFNNGRPLSEVVLSHEDADNDGKGGITSREAHIEEAKKPDSESFYYNNFKS HTLDNSFYFLRTPYAPFHTLLPSGSLEIKPNSYAIGDRDSPAMILRKQTSHQEVFETELEFSEPRTRLEEAGISI FYGDSLHNEVGITGGGPGGGRSVVVRTVTLNQQVGPWALTTANATVTNTTYISLSSTTEPVRLRIEASPMEYTLL YAEGKQGEWNEVARFDGSVLSTPPAGGFFFKGAAFAIYNTGNGKPSLTKARFGYWRQGQFS* |
| Coding | >Agabi119p4|023800 ATGTTATTATCACTTCTCTCCCTAGCTCTGACTGTCGCGGCGTCCGTTTTGGGTGTGACACATCTTCAACGGAAT CCAATTCTGCCAGGCTGGAATCCAGATCCTACAATACTACGTGTTGGGGAGGACTACTTTATTGCTACTTCTACG TTCGAGTATTTTCCTGGGCATCCGATATACCATAGCAAAAATTTGGTCGATTGGACCCACGTCGGGCATGGATTG AACAGACCTTCCCAGTTGGCGCTGTTCGGAACTCCTTCGGACGCTGGTGTATGGGCGCCATCATTGCGGTACCAC GACGGAACATATTATTTGACGTCAACAACGCGATACGTGTACACCGAGGAACTGCGGCTCTTCCCAAGGTCCTTC TATGTCACGACGAAGGACATCTTCTCCAATAACTGGAGTGACCCTATTTATTTTGACAGTCTAGGCTATGACGGC GACTTATTCTGGGACACCAACGGAGATGTCTACCTTACCTGGTCAGGCATAAACAATAACGAGGACAAGATCTAC AGCATATATCAGTCCAAGATTGACCTTGAAACTGGTACATCGCTAACGCCCGCTGAAATCATCTTCAATGGCACT CTTCCTCACGATTCCGCCGCACGACCCGAAGGTCCACATATCTACTACATCAACTCAACATATTATCTTCTCATA GCCGAAGGTGGTACAGGGATAACTCACCGGAGCACCATACAAAGAAGTACGACCAGTCCTGCCGGACCTTGGGAA AACAATCCCAATAATCCTATACTTTACAATGGTGCAAATACCAGTTTGTCGGTACAAAATACTGGACATGCGGAT ATTGTGCAGGCGATAGATGGAAGTTGGTGGGGAGTTGCTTTGGGAGTCCGACCACAGGGTGCGGAGGATGATGAT TTGAGGTTGAGCAGGGAACAACTTGGAAGGGAAACTTTTCTGTTTCCTGTTACATGGGTAGATGGATGGCCGGTT TTTAATAATGGAAGGCCTTTGTCCGAAGTGGTTTTATCGCATGAAGACGCTGATAACGATGGCAAGGGGGGCATT ACATCAAGAGAAGCTCACATTGAAGAGGCCAAGAAACCTGATTCGGAATCATTCTACTACAACAACTTCAAATCC CATACTCTCGACAATTCATTCTACTTCCTTCGTACTCCTTACGCTCCATTCCACACCCTCCTACCTTCCGGTTCT CTCGAAATTAAACCAAACTCATACGCTATAGGAGATAGAGATTCTCCTGCTATGATCCTTCGTAAACAAACATCT CACCAAGAGGTTTTCGAAACGGAATTAGAGTTTTCTGAACCAAGAACGAGACTCGAAGAAGCTGGGATCAGTATT TTTTATGGTGATTCCTTGCATAATGAAGTTGGTATTACCGGAGGAGGTCCGGGAGGAGGAAGGTCTGTGGTAGTC AGGACGGTGACTTTGAATCAGCAAGTTGGACCTTGGGCATTAACGACGGCAAATGCTACCGTTACAAATACGACA TATATTTCTCTCTCAAGTACAACCGAGCCAGTACGACTTCGTATCGAAGCCTCACCTATGGAATACACTCTACTC TACGCTGAAGGTAAACAAGGAGAGTGGAATGAAGTAGCGAGATTTGATGGGTCTGTGTTGTCTACTCCACCCGCT GGTGGTTTCTTCTTTAAAGGTGCCGCATTTGCGATTTACAATACGGGAAATGGAAAACCGAGTTTGACGAAAGCG AGATTTGGGTATTGGAGGCAGGGACAATTTTCATGA |
| Transcript | >Agabi119p4|023800 ATGTTATTATCACTTCTCTCCCTAGCTCTGACTGTCGCGGCGTCCGTTTTGGGTGTGACACATCTTCAACGGAAT CCAATTCTGCCAGGCTGGAATCCAGATCCTACAATACTACGTGTTGGGGAGGACTACTTTATTGCTACTTCTACG TTCGAGTATTTTCCTGGGCATCCGATATACCATAGCAAAAATTTGGTCGATTGGACCCACGTCGGGCATGGATTG AACAGACCTTCCCAGTTGGCGCTGTTCGGAACTCCTTCGGACGCTGGTGTATGGGCGCCATCATTGCGGTACCAC GACGGAACATATTATTTGACGTCAACAACGCGATACGTGTACACCGAGGAACTGCGGCTCTTCCCAAGGTCCTTC TATGTCACGACGAAGGACATCTTCTCCAATAACTGGAGTGACCCTATTTATTTTGACAGTCTAGGCTATGACGGC GACTTATTCTGGGACACCAACGGAGATGTCTACCTTACCTGGTCAGGCATAAACAATAACGAGGACAAGATCTAC AGCATATATCAGTCCAAGATTGACCTTGAAACTGGTACATCGCTAACGCCCGCTGAAATCATCTTCAATGGCACT CTTCCTCACGATTCCGCCGCACGACCCGAAGGTCCACATATCTACTACATCAACTCAACATATTATCTTCTCATA GCCGAAGGTGGTACAGGGATAACTCACCGGAGCACCATACAAAGAAGTACGACCAGTCCTGCCGGACCTTGGGAA AACAATCCCAATAATCCTATACTTTACAATGGTGCAAATACCAGTTTGTCGGTACAAAATACTGGACATGCGGAT ATTGTGCAGGCGATAGATGGAAGTTGGTGGGGAGTTGCTTTGGGAGTCCGACCACAGGGTGCGGAGGATGATGAT TTGAGGTTGAGCAGGGAACAACTTGGAAGGGAAACTTTTCTGTTTCCTGTTACATGGGTAGATGGATGGCCGGTT TTTAATAATGGAAGGCCTTTGTCCGAAGTGGTTTTATCGCATGAAGACGCTGATAACGATGGCAAGGGGGGCATT ACATCAAGAGAAGCTCACATTGAAGAGGCCAAGAAACCTGATTCGGAATCATTCTACTACAACAACTTCAAATCC CATACTCTCGACAATTCATTCTACTTCCTTCGTACTCCTTACGCTCCATTCCACACCCTCCTACCTTCCGGTTCT CTCGAAATTAAACCAAACTCATACGCTATAGGAGATAGAGATTCTCCTGCTATGATCCTTCGTAAACAAACATCT CACCAAGAGGTTTTCGAAACGGAATTAGAGTTTTCTGAACCAAGAACGAGACTCGAAGAAGCTGGGATCAGTATT TTTTATGGTGATTCCTTGCATAATGAAGTTGGTATTACCGGAGGAGGTCCGGGAGGAGGAAGGTCTGTGGTAGTC AGGACGGTGACTTTGAATCAGCAAGTTGGACCTTGGGCATTAACGACGGCAAATGCTACCGTTACAAATACGACA TATATTTCTCTCTCAAGTACAACCGAGCCAGTACGACTTCGTATCGAAGCCTCACCTATGGAATACACTCTACTC TACGCTGAAGGTAAACAAGGAGAGTGGAATGAAGTAGCGAGATTTGATGGGTCTGTGTTGTCTACTCCACCCGCT GGTGGTTTCTTCTTTAAAGGTGCCGCATTTGCGATTTACAATACGGGAAATGGAAAACCGAGTTTGACGAAAGCG AGATTTGGGTATTGGAGGCAGGGACAATTTTCATGA |
| Gene | >Agabi119p4|023800 ATGTTATTATCACTTCTCTCCCTAGCTCTGACTGTCGCGGCGTCCGTTTTGGGTGTGACACATCTTCAACGGAAT CCAATTCTGCCAGGCTGGAATCCAGATCCTACAATACTACGTGTTGGGGAGGACTACTTTATTGCTACTTCTACG TTCGAGTATTTTCCTGGGCATCCGATATACCATAGCAAAAATTTGGTCGATTGGACCCACGTCGGGCATGGATTG AACAGACCTTCCCAGTTGGCGCTGTTCGGAACTCCTTCGGACGCTGGTGCGTATTATTCACTTGTACTCCCTTAA GTATTGTCTGACTATCTATTTGCAGGTGTATGGGCGCCATCATTGCGGTACCACGACGGAACATATTATTTGACG TCAACAACGCGATACGTGTACACCGGTGGGTGGACGTGCACCTAATTCCTCATTTGTAGTCCGCTTACGCCTTCA TAAGAGGAACTGCGGCTCTTCCCAAGGTCCTTCTATGTCACGACGAAGGACATCTTCTCCAATAACTGGAGTGAC CCTATTTATTTTGGTGAACCCGATTCTTTATCCTCCCTGTAAATATATCTCATGTCTTGCTTCAGACAGTCTAGG CTATGACGGCGACTTATTCTGGGACACCAACGGAGATGTACACATTCGTTCTCTATCACTCGAGTTACGTGCTCA ACAAGCTATTTCAGGTCTACCTTACCTGGTCAGGCATAAACAATAACGAGGACAAGATCTACAGTACGTCTTCCT CCCCTCACAATCCCTCTTCGCATTGAACGTGGCTTCCTACAGGCATATATCAGTCCAAGATTGACCTTGAAACTG GTACATCGCTAACGCCCGCTGAAATCATCTTCAATGGCACTCTTCCTCACGATTCCGCCGCACGACCCGAAGGTC CACATATCTACTACATCAACTCAACATATTATCTTCTCATAGCCGAAGGTGGTACAGGGATAACTCACCGGAGCA CCATACAAAGAAGTACGACCAGTCCTGCCGGACCTTGGGAAAACAATCCCAATAATCCTATACTTTACAATGGTG CAAATACCAGTTTGTCGGTACAAAATACTGGACATGCGGATATTGTGCAGGCGATAGATGGAAGTTGGTGGGGAG TTGCTTTGGGAGTCCGACCACAGGGTGCGGAGGATGATGATTTGAGGTTGAGCAGGGAACAACTTGGAAGGGAAA CTTTTCTGTTTCCTGTTACATGGGTAGATGGATGGCCGGTTTTTAATAATGGAAGGCCTTTGTCCGAAGTGGTTT TATCGCATGAAGACGCTGATAACGATGGCAAGGGGGGCATTACATCAAGAGAAGCTCACATTGAAGAGGCCAAGA AACCTGATTCGGAATCATTCTACTACAACAACTTCAAATCCCATACTCTCGACAATTCATTCTACTTCCTTCGTA CTCCTTACGCTCCATTCCACACCCTCCTACCTTCCGGTTCTCTCGAAATTAAACCAAACTCATACGCTATAGGAG ATAGAGATTCTCCTGCTATGATCCTTCGTAAACAAACATCTCACCAAGAGGTTTTCGAAACGGAATTAGAGTTTT CTGAACCAAGAACGAGACTCGAAGAAGCTGGGATCAGTATTTTTTATGGTGATTCCTTGCATAATGAAGTTGGTA TTACCGGAGGAGGTCCGGGAGGAGGAAGGTCTGTGGTAGTCAGGACGGTGACTTTGAATCAGCAAGTTGGACCTT GGGCATTAACGACGGCAAATGCTACCGTTACAAATGTAGGTACACTCCATCCTCATGCATTTTTTCAATTCTTCA AACTGGCTCACCACATATCGTAGACGACATATATTTCTCTCTCAAGTACAACCGAGCCAGTACGACTTCGTATCG AAGCCTCACCTATGGAATACACTCTACTCTACGCTGAAGGTAAACAAGGAGAGTGGAATGAAGTAGCGAGATTTG ATGGGTCTGTGTTGTCTACTCCACCCGCTGGGTAAGTCGTTTTCACCAATACCAAGGAAGGCATTCATTTTATTA CGCCTTTCTATAGTGGTTTCTTCTTTAAAGGTGCCGCATTTGCGATTTACAATACGGGAAATGGAAAACCGAGTT TGACGAAAGCGAGATTTGGGTATTGGAGGCAGGGACAATTTTCATGA |