Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|023170
Gene name
Locationscaffold_11:541219..542454
Strand+
Gene length (bp)1235
Transcript length (bp)780
Coding sequence length (bp)780
Protein length (aa) 260

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 2.7E-25 14 210
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.0E-20 15 245

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O31680|YKVO_BACSU Uncharacterized oxidoreductase YkvO OS=Bacillus subtilis (strain 168) GN=ykvO PE=3 SV=1 15 247 2.0E-17
sp|Q92EK7|Y452_LISIN Uncharacterized oxidoreductase Lin0452 OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=lin0452 PE=3 SV=1 7 259 7.0E-11
sp|P25145|Y432_LISMO Uncharacterized oxidoreductase Lmo0432 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmo0432 PE=3 SV=2 7 259 9.0E-11
sp|A7TMJ2|MKAR_VANPO Very-long-chain 3-oxoacyl-CoA reductase OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=Kpol_513p6 PE=3 SV=1 15 197 4.0E-10
sp|P14802|YOXD_BACSU Uncharacterized oxidoreductase YoxD OS=Bacillus subtilis (strain 168) GN=yoxD PE=3 SV=2 25 241 7.0E-10
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Swissprot ID Swissprot Description Start End E-value
sp|O31680|YKVO_BACSU Uncharacterized oxidoreductase YkvO OS=Bacillus subtilis (strain 168) GN=ykvO PE=3 SV=1 15 247 2.0E-17
sp|Q92EK7|Y452_LISIN Uncharacterized oxidoreductase Lin0452 OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=lin0452 PE=3 SV=1 7 259 7.0E-11
sp|P25145|Y432_LISMO Uncharacterized oxidoreductase Lmo0432 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmo0432 PE=3 SV=2 7 259 9.0E-11
sp|A7TMJ2|MKAR_VANPO Very-long-chain 3-oxoacyl-CoA reductase OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=Kpol_513p6 PE=3 SV=1 15 197 4.0E-10
sp|P14802|YOXD_BACSU Uncharacterized oxidoreductase YoxD OS=Bacillus subtilis (strain 168) GN=yoxD PE=3 SV=2 25 241 7.0E-10
sp|A4IFA7|CBR4_BOVIN Carbonyl reductase family member 4 OS=Bos taurus GN=CBR4 PE=2 SV=1 10 208 8.0E-10
sp|A6ZLA1|MKAR_YEAS7 Very-long-chain 3-oxoacyl-CoA reductase OS=Saccharomyces cerevisiae (strain YJM789) GN=SCY_0371 PE=3 SV=1 15 197 2.0E-09
sp|B3LN00|MKAR_YEAS1 Very-long-chain 3-oxoacyl-CoA reductase OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SCRG_02811 PE=3 SV=1 15 197 2.0E-09
sp|P38286|MKAR_YEAST Very-long-chain 3-oxoacyl-CoA reductase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IFA38 PE=1 SV=1 15 197 3.0E-09
sp|O32291|YXNA_BACSU Uncharacterized oxidoreductase YxnA OS=Bacillus subtilis (strain 168) GN=yxnA PE=3 SV=2 10 237 7.0E-09
sp|O70351|HCD2_RAT 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus GN=Hsd17b10 PE=1 SV=3 1 196 9.0E-09
sp|P12310|DHG_BACSU Glucose 1-dehydrogenase OS=Bacillus subtilis (strain 168) GN=gdh PE=2 SV=2 10 247 2.0E-08
sp|P39484|DHG3_BACME Glucose 1-dehydrogenase 3 OS=Bacillus megaterium GN=gdhIII PE=3 SV=1 7 247 3.0E-08
sp|P39483|DHG2_BACME Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1 10 247 3.0E-08
sp|P39485|DHG4_BACME Glucose 1-dehydrogenase 4 OS=Bacillus megaterium GN=gdhIV PE=1 SV=1 7 247 3.0E-08
sp|Q6NUE2|CBR4_XENLA Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1 10 238 4.0E-08
sp|Q5FPE5|GMDH_GLUOX Glucose 1-dehydrogenase OS=Gluconobacter oxydans (strain 621H) GN=GOX2015 PE=1 SV=1 4 247 8.0E-08
sp|P55575|Y4MP_RHISN Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1 10 247 9.0E-08
sp|Q91VT4|CBR4_MOUSE Carbonyl reductase family member 4 OS=Mus musculus GN=Cbr4 PE=1 SV=2 10 221 1.0E-07
sp|Q8N4T8|CBR4_HUMAN Carbonyl reductase family member 4 OS=Homo sapiens GN=CBR4 PE=1 SV=3 10 208 1.0E-07
sp|P40747|YUXG_BACSU Uncharacterized oxidoreductase YuxG OS=Bacillus subtilis (strain 168) GN=yuxG PE=3 SV=2 25 238 2.0E-07
sp|O34717|FADH_BACSU Probable 2,4-dienoyl-CoA reductase OS=Bacillus subtilis (strain 168) GN=fadH PE=2 SV=1 6 244 2.0E-07
sp|Q3U0B3|DHR11_MOUSE Dehydrogenase/reductase SDR family member 11 OS=Mus musculus GN=Dhrs11 PE=1 SV=1 15 257 2.0E-07
sp|Q48436|BUDC_KLEPN Diacetyl reductase [(S)-acetoin forming] OS=Klebsiella pneumoniae GN=budC PE=1 SV=2 6 249 2.0E-07
sp|O02691|HCD2_BOVIN 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Bos taurus GN=HSD17B10 PE=1 SV=3 1 196 3.0E-07
sp|P10528|DHGA_BACME Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1 7 247 3.0E-07
sp|Q99714|HCD2_HUMAN 3-hydroxyacyl-CoA dehydrogenase type-2 OS=Homo sapiens GN=HSD17B10 PE=1 SV=3 1 196 4.0E-07
sp|Q92506|DHB8_HUMAN Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens GN=HSD17B8 PE=1 SV=2 15 242 6.0E-07
sp|Q3ZBV9|DHR11_BOVIN Dehydrogenase/reductase SDR family member 11 OS=Bos taurus GN=DHRS11 PE=2 SV=1 15 257 8.0E-07
sp|Q6UWP2|DHR11_HUMAN Dehydrogenase/reductase SDR family member 11 OS=Homo sapiens GN=DHRS11 PE=1 SV=1 15 257 8.0E-07
sp|Q71R50|DHR11_CHICK Dehydrogenase/reductase SDR family member 11 OS=Gallus gallus GN=DHRS11 PE=2 SV=1 15 257 9.0E-07
sp|Q5TJF5|DHB8_CANLF Estradiol 17-beta-dehydrogenase 8 OS=Canis lupus familiaris GN=HSD17B8 PE=3 SV=1 15 242 9.0E-07
sp|P37440|UCPA_ECOLI Oxidoreductase UcpA OS=Escherichia coli (strain K12) GN=ucpA PE=3 SV=3 15 193 1.0E-06
sp|Q6G6J1|Y2370_STAAS Uncharacterized oxidoreductase SAS2370 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2370 PE=3 SV=1 1 255 1.0E-06
sp|Q8NUV9|Y2403_STAAW Uncharacterized oxidoreductase MW2403 OS=Staphylococcus aureus (strain MW2) GN=MW2403 PE=3 SV=1 1 255 1.0E-06
sp|Q04520|BUDC_RAOTE Diacetyl reductase [(S)-acetoin forming] OS=Raoultella terrigena GN=budC PE=3 SV=1 15 227 1.0E-06
sp|Q8XBJ4|UCPA_ECO57 Oxidoreductase UcpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2 15 193 1.0E-06
sp|P54554|YQJQ_BACSU Uncharacterized oxidoreductase YqjQ OS=Bacillus subtilis (strain 168) GN=yqjQ PE=3 SV=1 4 232 2.0E-06
sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3 16 249 3.0E-06
sp|Q1DNC5|MKAR_COCIM Very-long-chain 3-oxoacyl-CoA reductase OS=Coccidioides immitis (strain RS) GN=CIMG_08188 PE=3 SV=2 15 197 3.0E-06
sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3 16 249 4.0E-06
sp|Q7TS56|CBR4_RAT Carbonyl reductase family member 4 OS=Rattus norvegicus GN=Cbr4 PE=2 SV=1 10 221 5.0E-06
sp|P39482|DHG1_BACME Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1 7 247 5.0E-06
sp|P00335|RIDH_ENTAE Ribitol 2-dehydrogenase OS=Enterobacter aerogenes GN=rbtD PE=1 SV=1 15 254 8.0E-06
sp|Q9GKX2|DHRS4_RABIT Dehydrogenase/reductase SDR family member 4 (Fragment) OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1 16 249 9.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|023170
MAQAAKRVLVLAGVGSTSGTGAATARRFAKEGYHLALLSRHAPQLQALEDEISNSGGHVTTFPLRSYSYEDMSSA
WDLIRETYGRPSYNIRAAIFNAGQSVFKPFMEITQDEIQQSLEVSVTSAFSFSREAISSFSQNEIEETSGKRGTL
IFTGATASVRGNTLTSLLAAGKFGARALSQSLAKEFGQNNIHVAHVIIDGKILTERTRQAFSSKVDQFDTNQNIR
LNPESVADAFAYLTNQDRSAWTWELDLRPAHERW*
Coding >Agabi119p4|023170
ATGGCTCAGGCTGCAAAGCGTGTTCTGGTTCTGGCTGGAGTGGGCAGTACCTCTGGTACAGGCGCAGCTACTGCC
CGTCGCTTTGCGAAAGAAGGGTATCATCTTGCTTTGTTGTCCCGGCACGCACCACAGCTTCAAGCACTTGAAGAT
GAGATCAGCAATTCCGGTGGCCATGTGACGACATTCCCATTAAGGTCTTATTCCTATGAAGACATGTCATCAGCT
TGGGATTTGATACGAGAGACTTATGGCCGCCCAAGCTACAATATCCGTGCCGCCATCTTCAACGCGGGCCAATCA
GTCTTCAAACCATTCATGGAAATCACACAGGATGAAATACAGCAGAGCCTTGAAGTCAGCGTTACATCCGCTTTC
TCTTTCTCTCGCGAAGCAATCTCCTCGTTCAGTCAAAATGAAATCGAAGAAACTTCAGGTAAACGAGGGACGCTA
ATATTCACTGGAGCGACAGCGAGTGTCCGGGGAAATACCCTGACAAGTTTACTCGCGGCTGGTAAATTTGGTGCA
AGAGCTCTTTCTCAGAGCTTGGCCAAAGAGTTCGGACAAAATAACATTCATGTTGCCCATGTCATCATTGACGGA
AAGATATTGACTGAACGTACACGTCAAGCGTTCAGTTCAAAAGTCGATCAGTTCGATACTAATCAGAACATTCGC
CTAAACCCTGAAAGTGTTGCAGATGCCTTTGCATATTTGACAAACCAAGACCGCTCCGCGTGGACATGGGAATTA
GATTTACGGCCGGCTCATGAAAGGTGGTAG
Transcript >Agabi119p4|023170
ATGGCTCAGGCTGCAAAGCGTGTTCTGGTTCTGGCTGGAGTGGGCAGTACCTCTGGTACAGGCGCAGCTACTGCC
CGTCGCTTTGCGAAAGAAGGGTATCATCTTGCTTTGTTGTCCCGGCACGCACCACAGCTTCAAGCACTTGAAGAT
GAGATCAGCAATTCCGGTGGCCATGTGACGACATTCCCATTAAGGTCTTATTCCTATGAAGACATGTCATCAGCT
TGGGATTTGATACGAGAGACTTATGGCCGCCCAAGCTACAATATCCGTGCCGCCATCTTCAACGCGGGCCAATCA
GTCTTCAAACCATTCATGGAAATCACACAGGATGAAATACAGCAGAGCCTTGAAGTCAGCGTTACATCCGCTTTC
TCTTTCTCTCGCGAAGCAATCTCCTCGTTCAGTCAAAATGAAATCGAAGAAACTTCAGGTAAACGAGGGACGCTA
ATATTCACTGGAGCGACAGCGAGTGTCCGGGGAAATACCCTGACAAGTTTACTCGCGGCTGGTAAATTTGGTGCA
AGAGCTCTTTCTCAGAGCTTGGCCAAAGAGTTCGGACAAAATAACATTCATGTTGCCCATGTCATCATTGACGGA
AAGATATTGACTGAACGTACACGTCAAGCGTTCAGTTCAAAAGTCGATCAGTTCGATACTAATCAGAACATTCGC
CTAAACCCTGAAAGTGTTGCAGATGCCTTTGCATATTTGACAAACCAAGACCGCTCCGCGTGGACATGGGAATTA
GATTTACGGCCGGCTCATGAAAGGTGGTAG
Gene >Agabi119p4|023170
ATGGCTCAGGCTGCAAAGCGTGTTCTGGTTCTGGCTGGTGAGTTCAAAACCCCATTTTCTGAGCATATCACTGCA
CAATCCGCACAGGAGTGGGCAGTACCTCTGGTACAGGCGCAGCTACTGCGTAAGTCTTAGGATTGCACTGGTGTA
GACTCATTCGACTTGAACGTTGACTTATAGCCGTCGCTTTGCGAAAGAAGGGTATCATCTTGCTTTGTTGTCCCG
GCACGCACCACAGCTTCAAGCACTTGAAGATGAGATCAGCAATTCCGGTGGCCATGTCTGTCTATCTCCCATTCG
GATGCTGTTTACATCTGTCTAAAACGAGTGCCTTTTTCTTCCAAGGTGACGACATTCCCATTAAGGTCTTATTCC
TATGAAGACATGTCATCAGCTTGGGATTTGATACGAGAGACTTATGGCCGCCCAAGCTACAATATCCGTGCCGCC
ATCTTCAACGCGGGCCAATCAGTCTTCAAACCATTCATGGAAATCACACAGGATGAAATACAGCAGAGCCTTGAA
GTCAGCGTTACATCCGCTTTCTCTTTCTCTCGCGAAGCAATCTCCTCGTTCAGTCAAAATGAAATCGAAGAAACT
TCAGGTAAACGAGGGACGCTAATATTCACTGGAGCGACAGCGAGTGTCCGGGGAAATACCCTGACAAGTTTACTC
GCGGCTGGTAAATTTGGTGCAAGAGCTCTTTCTCAGAGCTTGGCCAAAGAGTTCGGACAAAATAACATTCATGTA
TGTGTCAATCTGTCCACTTCACATCTTAATTAAACTGACAGATCCATGATTAGGTTGCCCATGTAAGTAACGATT
TCACAACATCAGATTTCTACTCAAATGCCAAATTGGAACATAATTAAAGGTCATCATTGACGGAAGTGAGTCAAC
TTTCCCTGTGCTTGTCTTTCCAATTTTGGTCATATTCTTTCCCCCCAGAGATATTGACTGAACGTACACGTCAAG
CGTTCAGTTCAAAAGTCGATCAGTTCGATACTAATCAGAACATTCGCCTAAACCCTGAAAGTGTTGCAGATGTAC
GAATCGTACCACAATCTGAGAAGCCAGTATCTGAAATGAAACTTTCCTTTCTAGGCCTTTGCATATTTGACAAAC
CAAGACCGCTCCGCGTGGACATGGGAATTAGATTGTACGTTAAACTCTCACGTTCAATAACAGCAAAATGACGCA
GATCATTAGTACGGCCGGCTCATGAAAGGTGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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