Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|022700
Gene name
Locationscaffold_11:409391..410693
Strand+
Gene length (bp)1302
Transcript length (bp)933
Coding sequence length (bp)933
Protein length (aa) 311

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4AK17|PLCX1_ARTBC PI-PLC X domain-containing protein 1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04618 PE=1 SV=1 24 309 4.0E-63
sp|D4AUX6|A8043_ARTBC Uncharacterized secreted protein ARB_08043 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_08043 PE=1 SV=1 22 309 6.0E-57
sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1 42 308 9.0E-12

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|022700
MGNIFHWSLVFAALAHCGLGLQPPQRRATVCNGHAELCDRAYSNVTTIGSHDSFAFSSNPLILARDQQVDIPTQL
NLGVRLLQAQSHMNDGVIHFCHTSCILFDGGTVVDYLKLVKTFLDNNPNEVLTFIFTNPENLSLTDVWKPAFDEA
GITPLAYVPPHVPMKNSEWPTLGEMIDSGKRVVVFLDAGADTSQVDFLLPEFEMIWETPFGVTDPSFPCSVDRID
GPLSTPDHSYMINHSLNKNILPIGDGVLVSDPLDAPTTNSVNSIIANVEGCVPLSGANRKPQFVLLDYVDIGNAF
QAANQLNGLA*
Coding >Agabi119p4|022700
ATGGGGAACATCTTTCACTGGTCTTTGGTTTTTGCAGCTTTGGCCCATTGCGGTCTTGGGTTACAGCCGCCCCAA
CGGAGGGCTACCGTTTGTAATGGCCATGCCGAACTGTGCGATCGAGCCTACTCAAATGTGACGACTATAGGATCC
CACGACTCGTTTGCGTTCAGCTCGAATCCCCTGATTCTTGCTAGGGATCAACAAGTTGATATACCGACCCAACTG
AATCTTGGTGTTCGACTATTGCAAGCTCAGTCGCATATGAACGATGGAGTTATTCATTTCTGCCATACGAGCTGT
ATCTTGTTTGATGGAGGAACAGTCGTCGATTACCTCAAGCTTGTCAAAACATTCTTGGACAATAACCCTAACGAA
GTGCTCACCTTTATCTTCACGAATCCGGAAAACTTATCGCTCACTGATGTTTGGAAACCCGCCTTTGATGAAGCC
GGTATTACACCTCTGGCTTATGTACCACCACATGTACCCATGAAGAACTCGGAATGGCCGACACTTGGAGAAATG
ATTGACAGCGGAAAGAGAGTCGTTGTCTTCCTTGACGCTGGAGCTGATACTTCCCAAGTCGATTTCCTCTTACCA
GAATTCGAGATGATCTGGGAAACGCCTTTTGGGGTTACAGACCCAAGCTTCCCGTGCAGCGTAGACCGTATTGAT
GGTCCATTGTCTACTCCCGATCATTCTTATATGATCAATCATTCTCTGAACAAGAACATTCTCCCCATCGGGGAC
GGTGTCCTTGTCAGTGATCCCCTTGATGCACCGACAACTAACAGTGTTAATTCGATTATTGCGAATGTCGAAGGT
TGTGTTCCGCTTAGTGGAGCTAACCGCAAACCACAGTTCGTTCTTCTTGACTATGTGGATATTGGAAATGCTTTT
CAAGCGGCCAATCAATTAAATGGTTTAGCGTAA
Transcript >Agabi119p4|022700
ATGGGGAACATCTTTCACTGGTCTTTGGTTTTTGCAGCTTTGGCCCATTGCGGTCTTGGGTTACAGCCGCCCCAA
CGGAGGGCTACCGTTTGTAATGGCCATGCCGAACTGTGCGATCGAGCCTACTCAAATGTGACGACTATAGGATCC
CACGACTCGTTTGCGTTCAGCTCGAATCCCCTGATTCTTGCTAGGGATCAACAAGTTGATATACCGACCCAACTG
AATCTTGGTGTTCGACTATTGCAAGCTCAGTCGCATATGAACGATGGAGTTATTCATTTCTGCCATACGAGCTGT
ATCTTGTTTGATGGAGGAACAGTCGTCGATTACCTCAAGCTTGTCAAAACATTCTTGGACAATAACCCTAACGAA
GTGCTCACCTTTATCTTCACGAATCCGGAAAACTTATCGCTCACTGATGTTTGGAAACCCGCCTTTGATGAAGCC
GGTATTACACCTCTGGCTTATGTACCACCACATGTACCCATGAAGAACTCGGAATGGCCGACACTTGGAGAAATG
ATTGACAGCGGAAAGAGAGTCGTTGTCTTCCTTGACGCTGGAGCTGATACTTCCCAAGTCGATTTCCTCTTACCA
GAATTCGAGATGATCTGGGAAACGCCTTTTGGGGTTACAGACCCAAGCTTCCCGTGCAGCGTAGACCGTATTGAT
GGTCCATTGTCTACTCCCGATCATTCTTATATGATCAATCATTCTCTGAACAAGAACATTCTCCCCATCGGGGAC
GGTGTCCTTGTCAGTGATCCCCTTGATGCACCGACAACTAACAGTGTTAATTCGATTATTGCGAATGTCGAAGGT
TGTGTTCCGCTTAGTGGAGCTAACCGCAAACCACAGTTCGTTCTTCTTGACTATGTGGATATTGGAAATGCTTTT
CAAGCGGCCAATCAATTAAATGGTTTAGCGTAA
Gene >Agabi119p4|022700
ATGGGGAACATCTTTCACTGGTCTTTGGTTTTTGCAGCTTTGGCCCATTGCGGTCTTGGGTTACAGCCGCCCCAA
CGGAGGTGAGTCCTAGTTTTTGTAACGGAGAGACACGCTGATTCCAGATTTTGAAAGGGCTACCGTTTGTAATGG
CCATGCCGAACTGTGCGATCGAGCCTACTCAAATGTGACGACTATAGGATCCCACGACTCGTTTGCGTTCAGCTC
GAATCCCCTGATTCGTAACTATCTTCAATAATAGGTTTAACGTGCCATTCAATTATAAATTAGTTGCTAGGGATC
AACAAGTTGATATACCGACCCAACTGAATCTTGGTGTTCGACTATTGCAAGCTCAGTCGCATATGTAAGTTAGCT
AGTTTTTTCCGTTCTTGGACAAGTCATCATGTGGTGGAACTACAGGAACGATGGAGTTATTCATTTCTGCCATAC
GAGCTGTGTAAGCTTGAAGTAAGTTTTTATCAAAGACACGCAACTGACATTGACGCCTAGATCTTGTTTGATGGA
GGAACAGTCGTCGATTACCTCAAGCTTGTCAAAACATTCTTGGACAATAACCCTAACGAAGTGCTCACCTTTATC
TTCACGAATCCGGAAAACTTATCGCTCACTGATGTTTGGAAACCCGCCTTTGATGAAGCCGGTATGTGAAGGCAC
AGAAGAGGCCTTGAAATCGCACTGACTAGTATCCAAGGTATTACACCTCTGGCTTATGTACCACCACATGTACCC
ATGAAGAACTCGGAATGGCCGACACTTGGAGAAATGATTGACAGCGGAAAGAGAGTCGTTGTCTTCCTTGACGCT
GGAGCTGATACTTCCCAAGTCGATTTCCTCTTACCAGAATTCGAGATGGTGAGCCTTGATTTATCCAACTTCGTT
GAAAATTTGTGAATGATATTTTTCGAAATAGATCTGGGAAACGCCTTTTGGGGTTACAGACCCAAGCTTCCCGTG
CAGCGTAGACCGTATTGATGGTCCATTGTCTACTCCCGATCATTCTTATATGATCAATCATTCTCTGAACAAGAA
CATTCTCCCCATCGGGGACGGTGTCCTTGTCAGTGATCCCCTTGATGCACCGACAACTAACAGTGTTAATTCGTA
AGTAATCCAATCATATAGAGAAGCAGTGCTCTCACATATGGCGGTAGGATTATTGCGAATGTCGAAGGTTGTGTT
CCGCTTAGTGGAGCTAACCGCAAACCACAGTTCGTTCTTCTTGACTATGTGGATATTGGAAATGCTTTTCAAGCG
GCCAATCAATTAAATGGTTTAGCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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