Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|022150
Gene name
Locationscaffold_11:228124..228834
Strand+
Gene length (bp)710
Transcript length (bp)597
Coding sequence length (bp)597
Protein length (aa) 199

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01161 PBP Phosphatidylethanolamine-binding protein 7.1E-20 55 161

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P31729|OV16_ONCVO OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2 14 194 4.0E-22
sp|O16264|PEBPH_CAEEL Phosphatidylethanolamine-binding protein homolog F40A3.3 OS=Caenorhabditis elegans GN=F40A3.3 PE=3 SV=1 11 197 4.0E-21
sp|Q06252|YL179_YEAST Uncharacterized protein YLR179C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR179C PE=1 SV=1 3 197 1.0E-19
sp|P54186|D1_ONCVO Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1 25 197 2.0E-19
sp|P54187|D2_ONCVO Protein D2 (Fragment) OS=Onchocerca volvulus GN=D2 PE=2 SV=1 77 197 7.0E-18
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Swissprot ID Swissprot Description Start End E-value
sp|P31729|OV16_ONCVO OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2 14 194 4.0E-22
sp|O16264|PEBPH_CAEEL Phosphatidylethanolamine-binding protein homolog F40A3.3 OS=Caenorhabditis elegans GN=F40A3.3 PE=3 SV=1 11 197 4.0E-21
sp|Q06252|YL179_YEAST Uncharacterized protein YLR179C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR179C PE=1 SV=1 3 197 1.0E-19
sp|P54186|D1_ONCVO Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1 25 197 2.0E-19
sp|P54187|D2_ONCVO Protein D2 (Fragment) OS=Onchocerca volvulus GN=D2 PE=2 SV=1 77 197 7.0E-18
sp|P54188|D3_ONCVO Protein D3 (Fragment) OS=Onchocerca volvulus GN=D3 PE=2 SV=1 44 197 4.0E-17
sp|P14306|CPYI_YEAST Carboxypeptidase Y inhibitor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFS1 PE=1 SV=2 8 197 5.0E-17
sp|Q41261|CEN_ANTMA Protein CENTRORADIALIS OS=Antirrhinum majus GN=CEN PE=1 SV=1 16 197 3.0E-16
sp|Q9XH43|CET2_TOBAC CEN-like protein 2 OS=Nicotiana tabacum GN=CET2 PE=2 SV=1 5 197 3.0E-16
sp|P93003|TFL1_ARATH Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana GN=TFL1 PE=1 SV=1 7 197 5.0E-16
sp|Q9ZNV5|CEN_ARATH Protein CENTRORADIALIS-like OS=Arabidopsis thaliana GN=CEN PE=2 SV=1 11 197 6.0E-16
sp|Q9XH42|CET4_TOBAC CEN-like protein 4 OS=Nicotiana tabacum GN=CET4 PE=2 SV=1 5 197 1.0E-15
sp|Q9D9G2|PEBP4_MOUSE Phosphatidylethanolamine-binding protein 4 OS=Mus musculus GN=Pebp4 PE=1 SV=1 72 187 3.0E-15
sp|O82088|SELFP_SOLLC Protein SELF-PRUNING OS=Solanum lycopersicum GN=SP PE=2 SV=1 3 197 3.0E-15
sp|P54189|PEBP_PLAFA Putative phosphatidylethanolamine-binding protein OS=Plasmodium falciparum PE=3 SV=1 8 198 3.0E-15
sp|Q9SXZ2|FT_ARATH Protein FLOWERING LOCUS T OS=Arabidopsis thaliana GN=FT PE=1 SV=2 3 197 4.0E-15
sp|Q9FIT4|BFT_ARATH Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana GN=BFT PE=3 SV=1 8 197 9.0E-15
sp|Q93WI9|HD3A_ORYSJ Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica GN=HD3A PE=1 SV=1 11 197 2.0E-14
sp|Q9S7R5|TSF_ARATH Protein TWIN SISTER of FT OS=Arabidopsis thaliana GN=TSF PE=2 SV=1 11 197 2.0E-14
sp|Q9XFK7|MFT_ARATH Protein MOTHER of FT and TF 1 OS=Arabidopsis thaliana GN=MFT PE=1 SV=1 8 197 8.0E-14
sp|Q96S96|PEBP4_HUMAN Phosphatidylethanolamine-binding protein 4 OS=Homo sapiens GN=PEBP4 PE=1 SV=3 65 186 2.0E-13
sp|Q9XH44|CET1_TOBAC CEN-like protein 1 OS=Nicotiana tabacum GN=CET1 PE=2 SV=1 3 151 2.0E-13
sp|P31044|PEBP1_RAT Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus GN=Pebp1 PE=1 SV=3 77 151 8.0E-13
sp|P70296|PEBP1_MOUSE Phosphatidylethanolamine-binding protein 1 OS=Mus musculus GN=Pebp1 PE=1 SV=3 77 151 2.0E-12
sp|Q8MK67|PEBP1_RABIT Phosphatidylethanolamine-binding protein 1 OS=Oryctolagus cuniculus GN=PEBP1 PE=2 SV=1 72 186 3.0E-12
sp|P13696|PEBP1_BOVIN Phosphatidylethanolamine-binding protein 1 OS=Bos taurus GN=PEBP1 PE=1 SV=2 77 151 4.0E-12
sp|P48737|PEBP1_MACFA Phosphatidylethanolamine-binding protein 1 OS=Macaca fascicularis GN=PEBP1 PE=2 SV=2 77 153 6.0E-12
sp|P30086|PEBP1_HUMAN Phosphatidylethanolamine-binding protein 1 OS=Homo sapiens GN=PEBP1 PE=1 SV=3 77 153 7.0E-12
sp|Q5R4R0|PEBP1_PONAB Phosphatidylethanolamine-binding protein 1 OS=Pongo abelii GN=PEBP1 PE=2 SV=3 77 153 8.0E-12
sp|Q3YIX4|PEBP1_CANLF Phosphatidylethanolamine-binding protein 1 OS=Canis lupus familiaris GN=PEBP1 PE=1 SV=1 77 151 1.0E-11
sp|Q8VWH2|HD3B_ORYSJ Protein HEADING DATE 3B OS=Oryza sativa subsp. japonica GN=HD3B PE=2 SV=1 11 197 4.0E-11
sp|P54185|OBA5_DROME Putative odorant-binding protein A5 OS=Drosophila melanogaster GN=a5 PE=2 SV=2 71 194 2.0E-10
sp|Q8VIN1|PEBP2_MOUSE Phosphatidylethanolamine-binding protein 2 OS=Mus musculus GN=Pbp2 PE=1 SV=1 77 153 3.0E-10
sp|Q5UR88|PEBPH_MIMIV Phosphatidylethanolamine-binding protein homolog R644 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R644 PE=1 SV=1 69 194 3.0E-09
sp|P54190|TES26_TOXCA 26 kDa secreted antigen OS=Toxocara canis GN=TES-26 PE=2 SV=1 13 154 1.0E-08
sp|Q3ZBF3|RM38_BOVIN 39S ribosomal protein L38, mitochondrial OS=Bos taurus GN=MRPL38 PE=1 SV=2 15 197 6.0E-07
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|022150
MSVTSDIINQLTSNGIIPDVLPPDSFTPSVFFTIIYPNTDVQTNLGNEVQRSNVLDEPEISIAPLNVPEVGDGEV
RYTLVMTDPDAPKRFEPKFREWRHWVITGLQVTNTQPGKADVVYAAKTKSATTPYWPPGPPPESGLHRYTFLLFE
EPKGGVTIPQGAVEYGTALEQRRSWNAMKFAEQYNLKLVGANFFLCQG*
Coding >Agabi119p4|022150
ATGAGCGTAACATCAGACATCATAAACCAACTCACCTCAAACGGCATAATTCCCGACGTCCTCCCTCCGGATTCC
TTCACCCCCTCTGTATTCTTCACCATCATCTACCCCAACACAGATGTTCAAACTAATCTCGGAAATGAGGTTCAA
AGATCCAATGTCCTTGACGAACCTGAGATTAGTATTGCACCCTTGAATGTACCTGAAGTGGGAGACGGAGAGGTT
AGATATACGCTCGTTATGACAGATCCCGATGCGCCGAAGAGATTCGAGCCCAAGTTTAGAGAGTGGAGGCATTGG
GTGATTACCGGATTACAAGTCACAAACACTCAACCTGGAAAAGCGGACGTGGTGTATGCGGCAAAGACCAAATCC
GCGACTACACCGTACTGGCCACCTGGTCCGCCACCCGAAAGCGGATTACACCGTTACACTTTCTTGTTGTTCGAA
GAGCCAAAAGGAGGGGTGACAATTCCCCAAGGTGCAGTCGAATACGGAACGGCATTGGAACAACGAAGAAGTTGG
AACGCGATGAAATTCGCAGAGCAATACAACCTCAAGCTTGTAGGAGCAAATTTCTTTTTGTGTCAAGGATAA
Transcript >Agabi119p4|022150
ATGAGCGTAACATCAGACATCATAAACCAACTCACCTCAAACGGCATAATTCCCGACGTCCTCCCTCCGGATTCC
TTCACCCCCTCTGTATTCTTCACCATCATCTACCCCAACACAGATGTTCAAACTAATCTCGGAAATGAGGTTCAA
AGATCCAATGTCCTTGACGAACCTGAGATTAGTATTGCACCCTTGAATGTACCTGAAGTGGGAGACGGAGAGGTT
AGATATACGCTCGTTATGACAGATCCCGATGCGCCGAAGAGATTCGAGCCCAAGTTTAGAGAGTGGAGGCATTGG
GTGATTACCGGATTACAAGTCACAAACACTCAACCTGGAAAAGCGGACGTGGTGTATGCGGCAAAGACCAAATCC
GCGACTACACCGTACTGGCCACCTGGTCCGCCACCCGAAAGCGGATTACACCGTTACACTTTCTTGTTGTTCGAA
GAGCCAAAAGGAGGGGTGACAATTCCCCAAGGTGCAGTCGAATACGGAACGGCATTGGAACAACGAAGAAGTTGG
AACGCGATGAAATTCGCAGAGCAATACAACCTCAAGCTTGTAGGAGCAAATTTCTTTTTGTGTCAAGGATAA
Gene >Agabi119p4|022150
ATGAGCGTAACATCAGACATCATAAACCAACTCACCTCAAACGGCATAATTCCCGACGTCCTCCCTCCGGATTCC
TTCACCCCCTCTGTATTCTTCACCATCATCTACCCCAACACAGATGTTCAAACTAATCTCGGAAATGAGGTTCAA
AGATCCAATGTCCTTGACGAACCTGAGATTAGTATTGCACCCTTGAATGTACCTGAAGTGGGAGACGGAGAGGTT
AGATATACGCTCGTTATGACAGATCCCGATGCGCCGAAGAGATTCGAGCCCAAGTTTAGAGAGTGGAGGCATTGG
GTGGTATGCTTTTCGTTATATATCAAGGAGTTATTTTGAACGATTAACGAGGGATGGGTCGTATAGATTACCGGA
TTACAAGTCACAAACACTCAACCTGGAAAAGCGGACGTGGTGTATGCGGCAAAGACCAAATCCGCGACTACACCG
TACTGGCCACCTGGTCCGCCACCCGAAAGCGGATTACACCGTTACAGTGAGTGTTTCATGAGCACCTTGTAATCA
ATTACTGATCATGTTCTGCAGCTTTCTTGTTGTTCGAAGAGCCAAAAGGAGGGGTGACAATTCCCCAAGGTGCAG
TCGAATACGGAACGGCATTGGAACAACGAAGAAGTTGGAACGCGATGAAATTCGCAGAGCAATACAACCTCAAGC
TTGTAGGAGCAAATTTCTTTTTGTGTCAAGGATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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